Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31]
846 sequences; 44,684,193 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq11 120 2e-22
seq27 102 5e-17
seq54 84.2 1e-11
>seq11
Length=1281110
Score = 120 bits (132), Expect = 2e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || | |||||| | |||||||| | ||| |||||||| ||||| ||||| |||
Sbjct 151510 CCACCACGAAGACGAAGGACCAAATGTAAAGTAGATTCCTTTTGGATGTTGTAATCCGAA 151451
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || | ||||||||||||||||| || || || | ||| |||||||| || ||
Sbjct 151450 AGGGTGCGGCCATCTTCAAGTTGTTTACCAGCGAAGATAAGACGTTGTTGGTCGGGTGGG 151391
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTA-ACGATAAAATTGTGTCTTCGCTCTCCAC 34658
| ||||||||||||| ||||| |||| | || || || || ||| ||
Sbjct 151390 ATTCCCTCCTTGTCTTGAATCTTAGACTTTACATTAT-CGATGGTATCCGACGACTCAAC 151332
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|||| || || || || |||||||| || || || |||||||||||
Sbjct 151331 CTCCAAAGTGATGGTCTTTCCGGTTAAAGTCTTGACGAAAATCTGCAT 151284
Score = 109 bits (120), Expect = 3e-19
Identities = 154/209 (74%), Gaps = 8/209 (4%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATC--TG 34537
|| || | |||||| | || | |||||||||| ||||||||||||||| || || |
Sbjct 150999 CCACCACGAAGACGGAGAACGAGATGGAGAGTGGACTCCTTTTGAATGTTGTAGTCACTC 150940
Query 34538 AAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCG 34597
|| ||| || | || ||||||||||| ||||| || || |||||||||||||| || |
Sbjct 150939 AAGGTG--CGACCATCCTCAAGTTGTTTTCCGGCGAAAATCAAACGCTGTTGGTCGGGGG 150882
Query 34598 GCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTC-TTCGCTCTC 34655
| | |||||||||||| |||| || | ||||| || |||||| || ||| |||
Sbjct 150881 GGATTCCCTCCTTGTCCTGGATC-TTAGACTTAACATTATCAATTGTATCGCTCG-ACTC 150824
Query 34656 CACTTCCACGGTTATCGTTTTACCGGTTA 34684
|| || | ||| || || || || ||||
Sbjct 150823 GACCTCAAGGGTGATGGTCTTGCCAGTTA 150795
Score = 96.9 bits (106), Expect = 2e-15
Identities = 162/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || | |||||| | |||||| || | ||||| |||||||||||||| || || |||
Sbjct 151738 CCACCACGAAGACGGAGCACCAAGTGCAAGGTGCTTTCCTTTTGAATGTTGTAGTCGGAA 151679
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
||||||| | || || | || || || ||||| || || | ||||||||| || ||
Sbjct 151678 AGTGTTCTACCATCCTCCAACTGCTTTCCTGCAAAGATCAATCTCTGTTGGTCAGGGGGG 151619
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCT-TCGCTCTCCA 34657
| |||||||| || ||| |||| || || || ||| || ||| || | || |
Sbjct 151618 ATACCCTCCTTATC-CTGAATCTTTGACTTGACATTATCAATAGTATCTGACGAT-TCAA 151561
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|||| | || || || || || || || || || ||||| || |||||
Sbjct 151560 CTTCTAATGTAATTGTCTTCCCAGTCAAAGTCTTAACAAAGATTTGCAT 151512
Score = 86.0 bits (94), Expect = 4e-12
Identities = 94/125 (75%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557
||||| ||||| || ||||| ||||| || ||||| || || || || | || |||
Sbjct 151264 ACCAAGTGGAGGGTAGATTCCTTCTGAATATTGTAATCGGAGAGGGTGCGACCATCCTCA 151205
Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617
||||| || ||||| || || ||||| ||||| || || || | |||||||||||||
Sbjct 151204 AGTTGCTTTCCGGCGAAGATCAAACGTTGTTGATCGGGGGGAATTCCCTCCTTGTCTTGA 151145
Query 34618 ATCTT 34622
|||||
Sbjct 151144 ATCTT 151140
>seq27
Length=671268
Score = 102 bits (112), Expect = 5e-17
Identities = 103/134 (77%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| |||||||| || || ||| ||| ||||| ||||| || || ||||| || ||
Sbjct 263810 AGACGTAACACCAAGTGAAGGGTGGACTCTTTTTGGATGTTGTAGTCGGAAAGAGTACGG 263869
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| || |||||||| || || || || || || ||||||||||| || || | |||||||
Sbjct 263870 CCATCCTCAAGTTGCTTTCCAGCGAAGATCAATCGCTGTTGGTCGGGTGGGATTCCCTCC 263929
Query 34609 TTGTCTGTGATCTT 34622
||||| ||||||
Sbjct 263930 TTGTCCTGGATCTT 263943
>seq54
Length=188590
Score = 84.2 bits (92), Expect = 1e-11
Identities = 82/106 (77%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 34517 CCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATA 34576
||||||| ||||| || ||||| || || || |||| |||||||| || || || || |
Sbjct 62441 CCTTTTGGATGTTGTAGTCTGAGAGAGTACGTCCGTCCTCAAGTTGCTTTCCAGCGAAGA 62500
Query 34577 TTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTT 34622
| || || |||||||| || || | |||||||||||| ||||||
Sbjct 62501 TCAAGCGTTGTTGGTCGGGAGGAATTCCCTCCTTGTCCTGGATCTT 62546
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314726354941118
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |