Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31]
846 sequences; 44,684,193 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq11 131 1e-25
>seq11
Length=1281110
Score = 131 bits (144), Expect = 1e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || ||| | ||||| ||| | || ||| | || || || ||||
Sbjct 151284 ATGCAGATTTTCGTCAAGACTTTAACCGGAAAGACCATCACTTTGGAGGTTGAGTCGTCG 151343
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | || || | || || || ||||||||||| || || || |||||||| |||
Sbjct 151344 GATACCATCGATAATGTAAAGTCTAAGATTCAAGACAAGGAGGGAATCCCACCCGACCAA 151403
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| ||| | || | ||| || |||||| | ||||| | ||| |||| |||||||||
Sbjct 151404 CAACGTCTTATCTTCGCTGGTAAACAACTTGAAGATGGCCGCACCCTTTCGGATTACAAC 151463
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| |||||||| || || ||||||||||| | ||| | || ||||| ||
Sbjct 151464 ATCCAAAAGGAATCTACTTTACATTTGGTCCTTCGTCTTCGTGGTGGTAT 151513
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || ||||| || ||| |||| || ||| | ||||| | ||||| ||| ||||
Sbjct 151512 ATGCAAATCTTTGTTAAGACTTTGACTGGGAAGACAATTACATTAGAAGTTGAATCGTCA 151571
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | ||||| | ||||| ||| ||||| || || || || || || || || |||
Sbjct 151572 GATACTATTGATAATGTCAAGTCAAAGATTCAGGATAAGGAGGGTATCCCCCCTGACCAA 151631
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | || || | || || || || ||||| || || || ||||||| ||||||
Sbjct 151632 CAGAGATTGATCTTTGCAGGAAAGCAGTTGGAGGATGGTAGAACACTTTCCGACTACAAC 151691
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
||||||||||| ||||| || ||||| | ||| | || |||||
Sbjct 151692 ATTCAAAAGGAAAGCACCTTGCACTTGGTGCTCCGTCTTCGTGGTGG 151738
Score = 113 bits (124), Expect = 4e-20
Identities = 146/202 (72%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 26995 TATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGA 27054
|| |||| || || || ||||| ||| | || || || || || ||| | || ||| | |
Sbjct 151063 TAGTTGTTAAGACACTCACCGGAAAGACCATCACGCTCGAGGTTGAATCTTCTGACACTA 151122
Query 27055 TTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTT 27114
| || | || || || ||||||||||| || || || || ||||||||||| ||||
Sbjct 151123 TCGATAACGTTAAGTCGAAGATTCAAGACAAGGAGGGAATTCCCCCCGATCAACAACGTT 151182
Query 27115 TAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAA 27174
| || | |||||| || ||| | || || || ||| | ||||||||||| ||||| |
Sbjct 151183 TGATCTTCGCCGGAAAGCAACTTGAGGATGGTCGCACCCTCTCCGATTACAATATTCAGA 151242
Query 27175 AGGAGTCGACCTTACATTTGGT 27196
|||| || ||| | || |||||
Sbjct 151243 AGGAATCTACCCTCCACTTGGT 151264
Score = 96.9 bits (106), Expect = 3e-15
Identities = 145/206 (70%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 27012 ACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAA 27071
|| |||||| | || || ||||| || || || ||| | ||||| | || ||
Sbjct 150797 ACTGGCAAGACCATCACCCTTGAGGTCGAGTCGAGCGATACAATTGATAATGTTAAGTCT 150856
Query 27072 AAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAA 27131
|| || || ||||| || || || || ||||| ||||||||||| || | |||||| |||
Sbjct 150857 AAGATCCAGGACAAGGAGGGAATCCCCCCCGACCAACAGCGTTTGATTTTCGCCGGAAAA 150916
Query 27132 CAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACAT 27191
||| | || || || ||| | || |||||||||||||||||||| || | |||
Sbjct 150917 CAACTTGAGGATGGTCGCACCTTGAGTGACTACAACATTCAAAAGGAGTCCACTCTCCAT 150976
Query 27192 TTGGTTTTGCGTTTGCGGGGTGGCAT 27217
| ||| | ||| | || ||||| ||
Sbjct 150977 CTCGTTCTCCGTCTTCGTGGTGGAAT 151002
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434913800737920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |