Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31]
846 sequences; 44,684,193 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq27 167 5e-36
seq11 167 5e-36
seq54 152 1e-31
seq29 89.7 1e-12
seq3 84.2 5e-11
>seq27
Length=671268
Score = 167 bits (184), Expect = 5e-36
Identities = 170/222 (77%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
||| || | || || | |||||| |||||||||||||||||||| || || | ||| ||
Sbjct 263806 ACGGAGACGTAACACCAAGTGAAGGGTGGACTCTTTTTGGATGTTGTAGTCGGAAAGAGT 263865
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| ||||| || || ||||| || |||||||| | || |||||||| || || | |||
Sbjct 263866 ACGGCCATCCTCAAGTTGCTTTCCAGCGAAGATCAATCGCTGTTGGTCGGGTGGGATTCC 263925
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||||||||||||||||| || || || ||||||||||| || |||||||||||
Sbjct 263926 CTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCAACCTCGAG 263985
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| || || ||||| || ||||| || || | ||||||
Sbjct 263986 GGTGATGGTTTTGCCCGTAAGGGTCTTGACGAAGATCTGCAT 264027
>seq11
Length=1281110
Score = 167 bits (184), Expect = 5e-36
Identities = 170/222 (77%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | ||||| | || | ||| || || ||||||||||| ||||||| ||||||
Sbjct 151505 ACGAAGACGAAGGACCAAATGTAAAGTAGATTCCTTTTGGATGTTGTAATCCGAAAGGGT 151446
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| |||||||| || || || || ||||||||||| ||||||||||| || || | |||
Sbjct 151445 GCGGCCATCTTCAAGTTGTTTACCAGCGAAGATAAGACGTTGTTGGTCGGGTGGGATTCC 151386
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
|||||||| || ||||| || || || |||||||| || || |||||||| |
Sbjct 151385 CTCCTTGTCTTGAATCTTAGACTTTACATTATCGATGGTATCCGACGACTCAACCTCCAA 151326
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|||||| |||||||| || | |||||| || || | ||||||
Sbjct 151325 AGTGATGGTCTTTCCGGTTAAAGTCTTGACGAAAATCTGCAT 151284
Score = 165 bits (182), Expect = 2e-35
Identities = 163/211 (77%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953
|||||||| ||||| | ||| || || || || || || || || ||||| | |||||
Sbjct 151276 CGAAGTCTAAGGACCAAGTGGAGGGTAGATTCCTTCTGAATATTGTAATCGGAGAGGGTG 151217
Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013
| ||||| || || ||||| || |||||||| | |||||||| || || |||| |||
Sbjct 151216 CGACCATCCTCAAGTTGCTTTCCGGCGAAGATCAAACGTTGTTGATCGGGGGGAATTCCC 151157
Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073
|||||||| || ||||| || ||||| ||||| |||||||| ||||||||||||
Sbjct 151156 TCCTTGTCTTGAATCTTCGACTTAACGTTATCGATAGTGTCAGAAGATTCAACCTCGAGC 151097
Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAA 211104
||||| |||||||| ||||| ||||| ||||
Sbjct 151096 GTGATGGTCTTTCCGGTGAGTGTCTTAACAA 151066
Score = 113 bits (124), Expect = 1e-19
Identities = 158/222 (71%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | || || | ||| | ||| || ||||| ||||| || || | ||| ||
Sbjct 151733 ACGAAGACGGAGCACCAAGTGCAAGGTGCTTTCCTTTTGAATGTTGTAGTCGGAAAGTGT 151674
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
|| ||||| |||| |||||| ||||| ||||| | | ||||||||||| || | ||
Sbjct 151673 TCTACCATCCTCCAACTGCTTTCCTGCAAAGATCAATCTCTGTTGGTCAGGGGGGATACC 151614
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||||| ||||| |||||| || || || || || || || || |||||| || |
Sbjct 151613 CTCCTTATCCTGAATCTTTGACTTGACATTATCAATAGTATCTGACGATTCAACTTCTAA 151554
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || ||||| || || | |||||| ||||| | |||||
Sbjct 151553 TGTAATTGTCTTCCCAGTCAAAGTCTTAACAAAGATTTGCAT 151512
Score = 102 bits (112), Expect = 2e-16
Identities = 146/202 (72%), Gaps = 8/202 (4%)
Strand=Plus/Minus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATC-CGCAAGGG 210951
|||||| | || || || || ||||||||||| ||||| ||||| || || | |||||
Sbjct 150994 ACGAAGACGGAGAACGAGATGGAGAGTGGACTCCTTTTGAATGTTGTAGTCACTCAAGG- 150936
Query 210952 TCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTC 211011
| | ||||| || || || || || ||||| || | || |||||||| || || | ||
Sbjct 150935 TGCGACCATCCTCAAGTTGTTTTCCGGCGAAAATCAAACGCTGTTGGTCGGGGGGGATTC 150876
Query 211012 CTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCT---TTCAACCT 211068
| ||||||||||||||||| || || || || || || || ||| || ||||
Sbjct 150875 CCTCCTTGTCCTGGATCTTAGACTTAACATTATCAATTGTATC---GCTCGACTCGACCT 150819
Query 211069 CGAGAGTGATCGTCTTTCCCGT 211090
| || ||||| ||||| || ||
Sbjct 150818 CAAGGGTGATGGTCTTGCCAGT 150797
>seq54
Length=188590
Score = 152 bits (168), Expect = 1e-31
Identities = 141/179 (79%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986
||||||||||| || || | || || | ||| || || || ||||| || ||||||||
Sbjct 62443 TTTTGGATGTTGTAGTCTGAGAGAGTACGTCCGTCCTCAAGTTGCTTTCCAGCGAAGATC 62502
Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046
| |||||||||||| ||||||| ||| ||||||||||||||||| || || || |||
Sbjct 62503 AAGCGTTGTTGGTCGGGAGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 62562
Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105
|||||||||||| || ||||| || ||||| ||||| ||||| || ||||| || ||
Sbjct 62563 ATGGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGAA 62621
>seq29
Length=608615
Score = 89.7 bits (98), Expect = 1e-12
Identities = 191/282 (68%), Gaps = 4/282 (1%)
Strand=Plus/Plus
Query 178086 TTCCAAAGTTCTTTTGGTTGCTCTTTCTGCAAATGGCATCTTTGTACGCAATGAAGGGCA 178145
|||| | |||||||||||| ||||| || ||||||||||| ||||| ||
Sbjct 545364 TTCCTAGGTTCTTTTGGTTACTCTTCTTGTTGCATGCATCTTTGTAAAGCATGAAAGGAT 545423
Query 178146 TTCCCACCTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTCT 178205
|||| ||| | ||| ||| ||||||| | |||||||| || || | ||||
Sbjct 545424 TTCCTGTCTCGGTTTGCGCCTCGAGAATAGAGTACCAAAGCTTTTGAGCCTTAATGGTCT 545483
Query 178206 TTTTGGCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGA 178265
| | || || | |||||||| | | ||||| |||| || ||| ||||| |
Sbjct 545484 TGCGACCCTTGCCAGCCTTCTCGTAACTCTCATAGAGAGCCTCAAACTCCTCGCCATAAA 545543
Query 178266 CATCATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCG-TCTTCCTTC 178324
| || | | ||| ||| ||||||||||| | || |||| | ||| |||| |||
Sbjct 545544 CGTCTGCCAAACCCGGACATTCATTGGGGCACATAAGGGTCCAGTCTCCGTTCTT--TTC 545601
Query 178325 -ACTCGTTTCATGAAGAGGTCAGAGGTCCAGATGGCATAGAA 178365
|| || ||||||||||| |||| |||| | |||||||||
Sbjct 545602 AACACGCTTCATGAAGAGATCAGGAATCCACAAGGCATAGAA 545643
>seq3
Length=1645291
Score = 84.2 bits (92), Expect = 5e-11
Identities = 139/201 (69%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 139810 CCAAAGAAGCACGGAAGAGGAGGACAATCTGCTCTGCGTTTTGAAAGACTTCGAAAGGAA 139869
|||||||||||||| | || || ||||||||||| ||||| | | ||||| ||||
Sbjct 548939 CCAAAGAAGCACGGTCGTGGTGGTCAATCTGCTCTTCGTTTCGCGCGTCTTCGTGAGGAG 548998
Query 139870 AAGAGGCACAACTACTTGAGAAAAGTTGCAGAGAACGCAATACAGTGTTTTATCAAAGAC 139929
||| | ||||||||| | |||| ||||| || || | ||| || |||| ||
Sbjct 548999 AAGCGTCACAACTACGTCCGAAAGGTTGCCGAATTAGCGGTGCAGAACTTCATCACAGCG 549058
Query 139930 AACAAGTGTTTTGTTTCTGGTATTGTTTTGGCAGGTTCCGCAGAGTTCAAGACAAAGCTC 139989
| ||| || ||||| || | ||||| ||||| || || ||||||| | |||
Sbjct 549059 GATAAGGTCAACGTAGCTGGTCTTATCTTGGCCGGTTCTGCCGATTTCAAGAACGATCTC 549118
Query 139990 CTGGAATCTGACTTTTTTGAC 140010
||||||| || ||||||
Sbjct 549119 AACCAATCTGATTTGTTTGAC 549139
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159139435516790
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |