Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31] 846 sequences; 44,684,193 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq27 167 5e-36 seq11 167 5e-36 seq54 152 1e-31 seq29 89.7 1e-12 seq3 84.2 5e-11 >seq27 Length=671268 Score = 167 bits (184), Expect = 5e-36 Identities = 170/222 (77%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 ||| || | || || | |||||| |||||||||||||||||||| || || | ||| || Sbjct 263806 ACGGAGACGTAACACCAAGTGAAGGGTGGACTCTTTTTGGATGTTGTAGTCGGAAAGAGT 263865 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | ||||| || || ||||| || |||||||| | || |||||||| || || | ||| Sbjct 263866 ACGGCCATCCTCAAGTTGCTTTCCAGCGAAGATCAATCGCTGTTGGTCGGGTGGGATTCC 263925 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||||||||||||||| || || || ||||||||||| || ||||||||||| Sbjct 263926 CTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCAACCTCGAG 263985 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || || ||||| || ||||| || || | |||||| Sbjct 263986 GGTGATGGTTTTGCCCGTAAGGGTCTTGACGAAGATCTGCAT 264027 >seq11 Length=1281110 Score = 167 bits (184), Expect = 5e-36 Identities = 170/222 (77%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | ||||| | || | ||| || || ||||||||||| ||||||| |||||| Sbjct 151505 ACGAAGACGAAGGACCAAATGTAAAGTAGATTCCTTTTGGATGTTGTAATCCGAAAGGGT 151446 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | |||||||| || || || || ||||||||||| ||||||||||| || || | ||| Sbjct 151445 GCGGCCATCTTCAAGTTGTTTACCAGCGAAGATAAGACGTTGTTGGTCGGGTGGGATTCC 151386 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 |||||||| || ||||| || || || |||||||| || || |||||||| | Sbjct 151385 CTCCTTGTCTTGAATCTTAGACTTTACATTATCGATGGTATCCGACGACTCAACCTCCAA 151326 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 |||||| |||||||| || | |||||| || || | |||||| Sbjct 151325 AGTGATGGTCTTTCCGGTTAAAGTCTTGACGAAAATCTGCAT 151284 Score = 165 bits (182), Expect = 2e-35 Identities = 163/211 (77%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 |||||||| ||||| | ||| || || || || || || || || ||||| | ||||| Sbjct 151276 CGAAGTCTAAGGACCAAGTGGAGGGTAGATTCCTTCTGAATATTGTAATCGGAGAGGGTG 151217 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | ||||| || || ||||| || |||||||| | |||||||| || || |||| ||| Sbjct 151216 CGACCATCCTCAAGTTGCTTTCCGGCGAAGATCAAACGTTGTTGATCGGGGGGAATTCCC 151157 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 |||||||| || ||||| || ||||| ||||| |||||||| |||||||||||| Sbjct 151156 TCCTTGTCTTGAATCTTCGACTTAACGTTATCGATAGTGTCAGAAGATTCAACCTCGAGC 151097 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAA 211104 ||||| |||||||| ||||| ||||| |||| Sbjct 151096 GTGATGGTCTTTCCGGTGAGTGTCTTAACAA 151066 Score = 113 bits (124), Expect = 1e-19 Identities = 158/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || || | ||| | ||| || ||||| ||||| || || | ||| || Sbjct 151733 ACGAAGACGGAGCACCAAGTGCAAGGTGCTTTCCTTTTGAATGTTGTAGTCGGAAAGTGT 151674 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 || ||||| |||| |||||| ||||| ||||| | | ||||||||||| || | || Sbjct 151673 TCTACCATCCTCCAACTGCTTTCCTGCAAAGATCAATCTCTGTTGGTCAGGGGGGATACC 151614 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||| ||||| |||||| || || || || || || || || |||||| || | Sbjct 151613 CTCCTTATCCTGAATCTTTGACTTGACATTATCAATAGTATCTGACGATTCAACTTCTAA 151554 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| || || | |||||| ||||| | ||||| Sbjct 151553 TGTAATTGTCTTCCCAGTCAAAGTCTTAACAAAGATTTGCAT 151512 Score = 102 bits (112), Expect = 2e-16 Identities = 146/202 (72%), Gaps = 8/202 (4%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATC-CGCAAGGG 210951 |||||| | || || || || ||||||||||| ||||| ||||| || || | ||||| Sbjct 150994 ACGAAGACGGAGAACGAGATGGAGAGTGGACTCCTTTTGAATGTTGTAGTCACTCAAGG- 150936 Query 210952 TCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTC 211011 | | ||||| || || || || || ||||| || | || |||||||| || || | || Sbjct 150935 TGCGACCATCCTCAAGTTGTTTTCCGGCGAAAATCAAACGCTGTTGGTCGGGGGGGATTC 150876 Query 211012 CTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCT---TTCAACCT 211068 | ||||||||||||||||| || || || || || || || ||| || |||| Sbjct 150875 CCTCCTTGTCCTGGATCTTAGACTTAACATTATCAATTGTATC---GCTCGACTCGACCT 150819 Query 211069 CGAGAGTGATCGTCTTTCCCGT 211090 | || ||||| ||||| || || Sbjct 150818 CAAGGGTGATGGTCTTGCCAGT 150797 >seq54 Length=188590 Score = 152 bits (168), Expect = 1e-31 Identities = 141/179 (79%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 ||||||||||| || || | || || | ||| || || || ||||| || |||||||| Sbjct 62443 TTTTGGATGTTGTAGTCTGAGAGAGTACGTCCGTCCTCAAGTTGCTTTCCAGCGAAGATC 62502 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 | |||||||||||| ||||||| ||| ||||||||||||||||| || || || ||| Sbjct 62503 AAGCGTTGTTGGTCGGGAGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 62562 Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105 |||||||||||| || ||||| || ||||| ||||| ||||| || ||||| || || Sbjct 62563 ATGGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGAA 62621 >seq29 Length=608615 Score = 89.7 bits (98), Expect = 1e-12 Identities = 191/282 (68%), Gaps = 4/282 (1%) Strand=Plus/Plus Query 178086 TTCCAAAGTTCTTTTGGTTGCTCTTTCTGCAAATGGCATCTTTGTACGCAATGAAGGGCA 178145 |||| | |||||||||||| ||||| || ||||||||||| ||||| || Sbjct 545364 TTCCTAGGTTCTTTTGGTTACTCTTCTTGTTGCATGCATCTTTGTAAAGCATGAAAGGAT 545423 Query 178146 TTCCCACCTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTCT 178205 |||| ||| | ||| ||| ||||||| | |||||||| || || | |||| Sbjct 545424 TTCCTGTCTCGGTTTGCGCCTCGAGAATAGAGTACCAAAGCTTTTGAGCCTTAATGGTCT 545483 Query 178206 TTTTGGCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGA 178265 | | || || | |||||||| | | ||||| |||| || ||| ||||| | Sbjct 545484 TGCGACCCTTGCCAGCCTTCTCGTAACTCTCATAGAGAGCCTCAAACTCCTCGCCATAAA 545543 Query 178266 CATCATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCG-TCTTCCTTC 178324 | || | | ||| ||| ||||||||||| | || |||| | ||| |||| ||| Sbjct 545544 CGTCTGCCAAACCCGGACATTCATTGGGGCACATAAGGGTCCAGTCTCCGTTCTT--TTC 545601 Query 178325 -ACTCGTTTCATGAAGAGGTCAGAGGTCCAGATGGCATAGAA 178365 || || ||||||||||| |||| |||| | ||||||||| Sbjct 545602 AACACGCTTCATGAAGAGATCAGGAATCCACAAGGCATAGAA 545643 >seq3 Length=1645291 Score = 84.2 bits (92), Expect = 5e-11 Identities = 139/201 (69%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 139810 CCAAAGAAGCACGGAAGAGGAGGACAATCTGCTCTGCGTTTTGAAAGACTTCGAAAGGAA 139869 |||||||||||||| | || || ||||||||||| ||||| | | ||||| |||| Sbjct 548939 CCAAAGAAGCACGGTCGTGGTGGTCAATCTGCTCTTCGTTTCGCGCGTCTTCGTGAGGAG 548998 Query 139870 AAGAGGCACAACTACTTGAGAAAAGTTGCAGAGAACGCAATACAGTGTTTTATCAAAGAC 139929 ||| | ||||||||| | |||| ||||| || || | ||| || |||| || Sbjct 548999 AAGCGTCACAACTACGTCCGAAAGGTTGCCGAATTAGCGGTGCAGAACTTCATCACAGCG 549058 Query 139930 AACAAGTGTTTTGTTTCTGGTATTGTTTTGGCAGGTTCCGCAGAGTTCAAGACAAAGCTC 139989 | ||| || ||||| || | ||||| ||||| || || ||||||| | ||| Sbjct 549059 GATAAGGTCAACGTAGCTGGTCTTATCTTGGCCGGTTCTGCCGATTTCAAGAACGATCTC 549118 Query 139990 CTGGAATCTGACTTTTTTGAC 140010 ||||||| || |||||| Sbjct 549119 AACCAATCTGATTTGTTTGAC 549139 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159139435516790