Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31]
846 sequences; 44,684,193 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq27 113 3e-20
seq11 105 5e-18
>seq27
Length=671268
Score = 113 bits (124), Expect = 3e-20
Identities = 155/214 (72%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || ||||| ||||| ||||| ||||| ||||| ||||| || ||
Sbjct 264027 ATGCAGATCTTCGTCAAGACCCTTACGGGCAAAACCATCACCCTCGAGGTTGAGTCTTCG 263968
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || ||| | || | || | | ||||| || || | || || || ||
Sbjct 263967 GACACCATCGACAATGTCAAGTCCAAGA-TCCAGGACAAGGAGGGAATCCCACCCGACCA 263909
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|||||| || || || || || || ||||| || || | || ||| | ||| |||||
Sbjct 263908 ACAGCGATTGATCTTCGCTGGAAAGCAACTTGAGGATGGCCGTACTCTTTCCGACTACAA 263849
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTA 23823
||| |||||||||||||| | || || || |||
Sbjct 263848 CATCCAAAAAGAGTCCACCCTTCACTTGGTGTTA 263815
>seq11
Length=1281110
Score = 105 bits (116), Expect = 5e-18
Identities = 151/211 (72%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| || || | || ||||| || |||||| | || ||||| || ||
Sbjct 151284 ATGCAGATTTTCGTCAAGACTTTAACCGGAAAGACCATCACTTTGGAGGTTGAGTCGTCG 151343
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
|| || | || | |||| || ||| ||||| || || | || || || |||
Sbjct 151344 GATACCATCGATAATGTAAAGTCTAAGATTCAAGACAAGGAGGGAATCCCACCCGACCAA 151403
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCA--CTTTAGGCGATTACA 23788
|| ||| | || || || || |||||||| ||||| | |||| |||| | |||||||
Sbjct 151404 CAACGTCTTATCTTCGCTGGTAAACAACTTGAAGATGGCCGCACCCTTTCG--GATTACA 151461
Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGT 23819
|||| ||||| || || || |||||||| ||
Sbjct 151462 ACATCCAAAAGGAATCTACTTTACATTTGGT 151492
Score = 82.4 bits (90), Expect = 5e-11
Identities = 132/187 (71%), Gaps = 2/187 (1%)
Strand=Plus/Plus
Query 23635 ACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTTGA-AATATTAAAACA 23693
|| || || || ||||| || || || || || | || || |||| ||| |||| |
Sbjct 150797 ACTGGCAAGACCATCACCCTTGAGGTCGAGTCGAGCGATACAATTGATAATGTTAAGTCT 150856
Query 23694 AAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAA 23753
|| | | ||||| || || | || || || ||||||||||| || || ||||| ||
Sbjct 150857 AAGA-TCCAGGACAAGGAGGGAATCCCCCCCGACCAACAGCGTTTGATTTTCGCCGGAAA 150915
Query 23754 ACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAAAGAGTCCACATTACA 23813
|||||| || || | ||||| || | || |||||||| ||||| |||||||| | ||
Sbjct 150916 ACAACTTGAGGATGGTCGCACCTTGAGTGACTACAACATTCAAAAGGAGTCCACTCTCCA 150975
Query 23814 TTTAGTT 23820
| | |||
Sbjct 150976 TCTCGTT 150982
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338006114909768
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |