Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31]
846 sequences; 44,684,193 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq11 149 1e-30
seq27 138 3e-27
seq54 125 2e-23
seq8 91.5 4e-13
>seq11
Length=1281110
Score = 149 bits (164), Expect = 1e-30
Identities = 166/222 (75%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| | ||||| | || | ||| ||||| ||||||| |||||||| | | ||
Sbjct 151505 ACGAAGACGAAGGACCAAATGTAAAGTAGATTCCTTTTGGATGTTGTAATCCGAAAGGGT 151446
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| |||||||| || || || |||||||||||||| |||||||||||||| || || ||
Sbjct 151445 GCGGCCATCTTCAAGTTGTTTACCAGCGAAGATAAGACGTTGTTGGTCGGGTGGGATTCC 151386
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
||||||||||| ||||| ||| ||| |||||||| || || | || || || ||
Sbjct 151385 CTCCTTGTCTTGAATCTTAGACTTTACATTATCGATGGTATCCGACGACTCAACCTCCAA 151326
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| ||||| || || ||||| || | ||| | |||||
Sbjct 151325 AGTGATGGTCTTTCCGGTTAAAGTCTTGACGAAAATCTGCAT 151284
Score = 140 bits (154), Expect = 8e-28
Identities = 149/197 (76%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552
|||||||| ||||| | |||||| || ||||| || || | ||||||||||| | ||
Sbjct 151276 CGAAGTCTAAGGACCAAGTGGAGGGTAGATTCCTTCTGAATATTGTAATCGGAGAGGGTG 151217
Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612
| ||||| || || ||||| || |||||||| | |||||||| ||||| ||||| ||
Sbjct 151216 CGACCATCCTCAAGTTGCTTTCCGGCGAAGATCAAACGTTGTTGATCGGGGGGAATTCCC 151157
Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672
||||||||||| ||||| ||| || ||||| ||||| || | ||| || || | |
Sbjct 151156 TCCTTGTCTTGAATCTTCGACTTAACGTTATCGATAGTGTCAGAAGATTCAACCTCGAGC 151097
Query 225673 GTGATCGTCTTGCCCGT 225689
||||| ||||| || ||
Sbjct 151096 GTGATGGTCTTTCCGGT 151080
Score = 96.9 bits (106), Expect = 8e-15
Identities = 140/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| | || || || ||||||||||| || ||||| | ||||| || ||| ||
Sbjct 150994 ACGAAGACGGAGAACGAGATGGAGAGTGGACTCCTTTTGAATGTTGTAGTCACTCAAGGT 150935
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| ||||| || || || || || ||||| || | || ||||||||||| || || ||
Sbjct 150934 GCGACCATCCTCAAGTTGTTTTCCGGCGAAAATCAAACGCTGTTGGTCGGGGGGGATTCC 150875
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||||| |||||||| ||| ||| || || || || | || || || |
Sbjct 150874 CTCCTTGTCCTGGATCTTAGACTTAACATTATCAATTGTATCGCTCGACTCGACCTCAAG 150815
Query 225672 CGTGATCGTCTTGCCCGT 225689
||||| |||||||| ||
Sbjct 150814 GGTGATGGTCTTGCCAGT 150797
>seq27
Length=671268
Score = 138 bits (152), Expect = 3e-27
Identities = 153/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 225510 GTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTG 225569
||| || ||||| |||||||||| ||||| |||| | ||| | ||||| || || ||
Sbjct 263824 GTGAAGGGTGGACTCTTTTTGGATGTTGTAGTCGGAAAGAGTACGGCCATCCTCAAGTTG 263883
Query 225570 CTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTT 225629
||| ||||||||||| | ||| ||||||||||| || || || |||||||| ||||||||
Sbjct 263884 CTTTCCAGCGAAGATCAATCGCTGTTGGTCGGGTGGGATTCCCTCCTTGTCCTGGATCTT 263943
Query 225630 TTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689
||| ||| ||||||||||| || | || || || | ||||| || ||||||||
Sbjct 263944 GGACTTGACATTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATGGTTTTGCCCGT 264003
Query 225690 CAAAGTTTTTATGAACACTTGCAT 225713
| || || | ||| | |||||
Sbjct 264004 AAGGGTCTTGACGAAGATCTGCAT 264027
>seq54
Length=188590
Score = 125 bits (138), Expect = 2e-23
Identities = 126/164 (77%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585
||||||| ||||| || | | ||| | || || || || ||||| |||||||||||
Sbjct 62443 TTTTGGATGTTGTAGTCTGAGAGAGTACGTCCGTCCTCAAGTTGCTTTCCAGCGAAGATC 62502
Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645
| |||||||||||||| ||||| || |||||||| |||||||| ||| ||| |||
Sbjct 62503 AAGCGTTGTTGGTCGGGAGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 62562
Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689
|||||||| |||| || || || | ||||| |||||||||||
Sbjct 62563 ATGGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGT 62606
>seq8
Length=1416429
Score = 91.5 bits (100), Expect = 4e-13
Identities = 83/105 (79%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529
||| ||||| |||||||||||||| ||||| || || |||||||||||||| ||||||||
Sbjct 1226465 GAAAATTTGTCCATCAGTAATAGAAATAACGTTGGTTGGGATATAAGCAGACACATCACC 1226524
Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACC 4574
|||| || || | | || | ||| || | |||||||||||
Sbjct 1226525 ACCTTGAGTCTCAATGATGGGGAGGGCAGTCAAAGATCCACCACC 1226569
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192518273707124
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |