Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31] 846 sequences; 44,684,193 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq29 360 3e-94 >seq29 Length=608615 Score = 360 bits (398), Expect = 3e-94 Identities = 1332/2068 (64%), Gaps = 53/2068 (3%) Strand=Plus/Plus Query 76782 GTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 76841 ||||| ||||| || | || || | | ||||| | ||||||||| || || || | | Sbjct 544373 GTAAATTGAATAGGTGCCGAGGCAGCCATGGTACGCAAATAGTACATTCCGGTCTTCAAA 544432 Query 76842 CCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATA 76901 |||| |||| || |||||||| ||| | ||| ||||||| || Sbjct 544433 CCCAATTTCCAGCCAGCAAAATGCATAGATGTGATCTTGCCCATTGTAGGATCTTTCATG 544492 Query 76902 TGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATA 76961 ||||| ||||| || ||| |||||| |||||||| || | ||| || ||||||| | | Sbjct 544493 TGAATGTTCATAGATTGAGATTGATCAATGAAAGCACCACGATCGGCAGCCATTTGAACA 544552 Query 76962 ATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGG 77021 || || || | |||||||||| ||| ||| ||| ||||| ||| |||||| | Sbjct 544553 ATTGTTCGCTGGGAGATTTCCCAAACAGTCTTGTAAAGGGCCTTGATGTCAGCTGGAATG 544612 Query 77022 TTTG---TATTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTATATCATCATTC 77078 || | ||||||| ||||| |||||||| | || || ||||| |||| |||| | Sbjct 544613 TTGGGGATATTTTGGATGGATCCACCATCAGCAATGATACGGTTCTTCATATTATCAGAC 544672 Query 77079 CACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTGAAATTCTCCA 77138 || | | | || | | || | || || || || || | || ||||||||| Sbjct 544673 CAGAGACCCATATCGACGAGATCTTTGAGAAGCCATGGGTTGACGACCTGGAATTCTCCA 544732 Query 77139 GACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCC 77198 | | || | ||| | ||| || || ||||| ||||| | | |||| ||| || Sbjct 544733 GCAAGAACACGACGCGAGTAGATGTTCGAAGTATAAGGTTCGAAACATTCGTTGAAACCA 544792 Query 77199 AAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGACCA 77258 | ||||| | || ||||||||||||||| || || | | | || | || || Sbjct 544793 AGGATTTGGGATGTGCTAGCAGTTGGCATAGGCGCAACAAGGAGAGAGTTGCGGATTCCG 544852 Query 77259 TGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTACAACATCC 77318 ||| |||| | || | | | ||||||||| | ||| | |||| |||| || Sbjct 544853 TGTTGCTTGATCGATTGCTTCAACGAGTCCCAATCCCACAAATCAGTAGGTGTAACACCC 544912 Query 77319 CAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATTATATGTTTCATAAGGT 77378 || | |||||||| || || ||| | || || | ||| ||||| || || Sbjct 544913 CACATGTCGTATTGAAGTTCACCCTTAGAGACTGGGGAACCTTGATAAGTTTCGTATGGA 544972 Query 77379 CC---TTCTGTTTCAGCTAGTTCACAACTC--GCTTCCAATGCTCCGTAATAAATTGTTT 77433 || ||| || | | || |||| | ||| || ||| || || || | Sbjct 544973 CCAAGTTCCTTTGC-----GATCTCAACGGATGAGGTCAAGGCAGCGTGGTAGATAGTCT 545027 Query 77434 CGAAAATCTTCTTATTGAGAT-CTTGTGCTTCAATACTATCAAACGGATAATGTAAAAGA 77492 | ||||| | | ||||| | |||| ||||| | || || ||| | | | Sbjct 545028 CAAAAATTTGGATGTTGAGGTGCTTG-GCTTCGGGAGAGTCGAATGGAAGACGAAGGGCC 545086 Query 77493 ATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAA 77552 | ||| ||||| || | || ||||| || | | | ||||||| || | |||| Sbjct 545087 AAAAAAGCATCAGCAAGACCTTGAACACCGACAGCGATAGGTCGGTGACGGAAATTGCTC 545146 Query 77553 ATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATTTCTAACA 77612 || | ||||| ||| |||||||| || ||||| ||||| || || | |||||||||| Sbjct 545147 TTTCTCGCTTCCTGAACCGGATAATAGTTGATGTCAATAATCTTGTTCAAATTTCTAACA 545206 Query 77613 ACTACTT---TAACCACGTCCTTTAGTTTAAGAAAATCAAA-------TCTTCCATCTAT 77662 || |||| ||||| ||| || || | ||||| | || | ||| | | Sbjct 545207 ACAACTTGGGTAACCTCGTGA---AGCTTTTGGAAATCGTAAGTGCCCTCATTCATGT-T 545262 Query 77663 AACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGC 77722 |||||| | |||||| ||||| || | |||||| || ||||||| | | Sbjct 545263 AACAAAAGTTGGCAAAGCGATAGAAGCCAAGTTACAACAAGCAACCTCATCCGGCGCAGA 545322 Query 77723 ATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTT 77782 || | | ||||| || || | || | ||||| || || || | |||||| Sbjct 545323 GTACTCAACGATCTCCGTGCACAAGTTGGAGCTGCGAATAGTTCCTAGGTTCTTTTGGTT 545382 Query 77783 GCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGA 77842 ||||| || ||||||| || || ||||| || || ||| | || || || | || | Sbjct 545383 ACTCTTCTTGTTGCATGCATCTTTGTAAAGCATGAAAGGATTTCCTGTCTCGGTTTGCGC 545442 Query 77843 TTCGATAATAGATTTCCAGACGACTCTAGCTTTTATCATA----GATTTGTATC-GCCTC 77897 |||| |||||| | ||| | | ||| || || | || | | |||| Sbjct 545443 CTCGAGAATAGAGTACCAAAGCTTTTGAGCCTTAATGGTCTTGCGACCCTTGCCAGCCT- 545501 Query 77898 TCTCTT---TCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAAT 77954 |||| | || || ||| |||| ||||| || || || |||| || |||| Sbjct 545502 TCTCGTAACTCTCATAGAG-----AGCC--TCAAACTCCTCGCCATAAACGTCTGCCAAA 545554 Query 77955 CCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATA 78014 || || |||||||| |||||||| | | |||||| || | | | ||| || ||||| Sbjct 545555 CCCGGACATTCATTGGGGCACATAAGGGTCCAGTCTCCGTTCTTTTCAACACGCTTCATG 545614 Query 78015 AAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCT 78074 ||||||||||| ||||| | ||| || ||||| || | | | |||||| || || Sbjct 545615 AAGAGATCAGGAATCCACAAGGCATAGAAGAGATCACGTGCGCGAACTTCTTCCTTACCA 545674 Query 78075 GTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATT 78134 |||||| ||||| || ||||| | || ||| | ||||||||| || || || | Sbjct 545675 TGATTCTTGCGTAGATCAAGGAACTCGAAAACATCGGCATGCCATGGCTCAAGGTAAACA 545734 Query 78135 GCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAA 78194 || | | | ||||| || || ||||| || || || | ||||||||||||||| || || Sbjct 545735 GCAAAAGCACCAGGGCGCTTGTTACCACCTTGGTCAACATATCTGGCGGTGTTGTTGAAA 545794 Query 78195 ACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCA 78254 |||| | ||| |||| ||| ||||| || |||| || || || | ||||| ||| Sbjct 545795 ACTCGGAGCATGGGAACAATGCCGTTGGAATTTCCGTTGGTACCGGCGATATAGGCACCA 545854 Query 78255 CTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCG 78314 | || || || | |||| | || || || || || |||| || || | || Sbjct 545855 GTAGCACGGATTCTGTGAATGTTGAGACCAATACCACCGGCATTCTTTGAGATCATGGCA 545914 Query 78315 CAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAA 78374 ||| ||||| || ||||| ||||| || ||||| || || |||||| | || || Sbjct 545915 CAAATCTTCAAAGTGTCGTAAATACCATCGATACTATCTTCTTTCATGTCGATGAGGAAG 545974 Query 78375 CAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTA 78434 || ||| | ||| || || || ||| || | ||| || || ||||| ||| Sbjct 545975 CACGAAGAAAGTTGTGCCTGTGGGGTACCCGCAGAGAAGAGTGTTGGGGAGGCATGTGTA 546034 Query 78435 AACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTC-CCATTGATG 78493 || | || | || | || ||||||||| ||||| || || || || || | || Sbjct 546035 AAGTACTTGTTTGACATTAAATTGTATGTCTCAATGGCACTCTCAATATCATCACCG-TG 546093 Query 78494 AATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTAT 78553 ||| || ||||| |||||||| | ||| || || || | ||| | || || | Sbjct 546094 AATACCAACCGCAACACGCATGATCATTTGTTGTGGACGTTCTGCAACTTTGCCATCGAG 546153 Query 78554 TTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCT 78611 | | ||||||| || | ||| || ||||| || || | ||| ||||| ||| Sbjct 546154 ACGTAGAAGGTATGATCGCTCAAGAGTCTTGAAACCGAAGTATTGGTAGTTGAAA--TCT 546211 Query 78612 CTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTTGGTAACAATATCCATGACA 78671 | ||||| | ||| |||| || |||| |||| | | | |||| | || || Sbjct 546212 CGATCGTAGACTATAGCAGAGTTGAGTTCCTCTTCATGTCTCATAAC-ACATTCAAATGT 546270 Query 78672 GTAGTTG-AAATAATAGGAGATCGTACACCATTTTTAGGATTAACATAGTTAAATAAATC 78730 | ||| ||| ||||||||| || |||||| | || || ||| | | ||||||| Sbjct 546271 TTCTTTGCTAATCATAGGAGATGGTGTGCCATTTCTTGGGTTTGTATATTGATATAAATC 546330 Query 78731 TTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAGATTAGATACAGCTATTCT 78790 || || | | ||| |||| || |||| |||||| || ||||| || || || | Sbjct 546331 GCGGATAACGTGAGAGAATTGTTTCTTGGTTTGCTTGTGGAGGTTAGAGACTGCAATACG 546390 Query 78791 TGCAGCTAGAATAGCATAATCAGGATGT 78818 |||||||||||||||||||| |||||| Sbjct 546391 GGCAGCTAGAATAGCATAATCGGGATGT 546418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694661453877440