Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31] 846 sequences; 44,684,193 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq29 304 2e-77 seq23 118 2e-21 >seq29 Length=608615 Score = 304 bits (336), Expect = 2e-77 Identities = 1304/2036 (64%), Gaps = 49/2036 (2%) Strand=Plus/Plus Query 75407 GTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTT 75466 ||||| | ||||||||| || || || | ||||| |||| || |||||||| | Sbjct 544403 GTACGCAAATAGTACATTCCGGTCTTCAAACCCAATTTCCAGCCAGCAAAATGCATAGAT 544462 Query 75467 GTTAGTTTGGAATAACTCGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATG 75526 || | ||| | ||||| || ||||| ||||| || ||| |||||| ||| Sbjct 544463 GTGATCTTGCCCATTGTAGGATCTTTCATGTGAATGTTCATAGATTGAGATTGATCAATG 544522 Query 75527 AAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTT 75586 ||||| || | ||| || ||||||| | ||| || || | |||||||||| ||| Sbjct 544523 AAAGCACCACGATCGGCAGCCATTTGAACAATTGTTCGCTGGGAGATTTCCCAAACAGTC 544582 Query 75587 TTGAAAACTTGTTTGATATCATCTGGAAGATTTG---TATTTTGAATGGATCCGCCATCA 75643 ||| ||| ||||| ||| |||||| || | ||||||| |||||||| |||||| Sbjct 544583 TTGTAAAGGGCCTTGATGTCAGCTGGAATGTTGGGGATATTTTGGATGGATCCACCATCA 544642 Query 75644 GATATAATTGTATTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGG 75703 | || || ||||| || | |||| ||| | | ||| | | || | || Sbjct 544643 GCAATGATACGGTTCTTCATATTATCAGACCAGAGACCCATATCGACGAGATCTTTGAGA 544702 Query 75704 AGATGAGGATTAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTG 75763 || || || || | || |||||||||| | || | || | ||| || || Sbjct 544703 AGCCATGGGTTGACGACCTGGAATTCTCCAGCAAGAACACGACGCGAGTAGATGTTCGAA 544762 Query 75764 GTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATA 75823 ||||| ||||| | | |||| ||| || | ||||| | || |||||| |||||| Sbjct 544763 GTATAAGGTTCGAAACATTCGTTGAAACCAAGGATTTGGGATGTGCTAGCAGTTGGCATA 544822 Query 75824 GGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTC 75883 || || || | | | || | || || ||| |||| | || | | | | Sbjct 544823 GGCGCAACAAGGAGAGAGTTGCGGATTCCGTGTTGCTTGATCGATTGCTTCAACGAGTCC 544882 Query 75884 CAATCCCAAAGATCTGATGGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTA 75943 |||||||| | ||| | ||| |||| |||| | |||||||| || || || Sbjct 544883 CAATCCCACAAATCAGTAGGTGTAACACCCCACATGTCGTATTGAAGTTCACCCTTAGAG 544942 Query 75944 GCATATGATCCATTATATGTTTCGTAAGTCCC--GTCCTTTTCAGCTAGTTCGCAAC--- 75998 | || || | ||| |||||||| | || || | ||| || | || |||| Sbjct 544943 ACTGGGGAACCTTGATAAGTTTCGTATGGACCAAGTTCCTTT--GCGA--TCTCAACGGA 544998 Query 75999 TCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGAT-CTTGCGCT 76057 | || || ||| ||| || || || || ||||| | | || || | |||| ||| Sbjct 544999 TGAGGTC-AAGGCAGCGTGGTAGATAGTCTCAAAAATTTGGATGTTGAGGTGCTTG-GCT 545056 Query 76058 TCAAGACTATCAAAAGGATAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCA 76117 || || || || ||| | | | | ||| ||||| || || || ||||| || Sbjct 545057 TCGGGAGAGTCGAATGGAAGACGAAGGGCCAAAAAAGCATCAGCAAGACCTTGAACACCG 545116 Query 76118 ATACCAATAGGTCTATGTCTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTA 76177 | | | ||||||| || | |||| || ||||| ||| || ||||| || Sbjct 545117 ACAGCGATAGGTCGGTGACGGAAATTGCTCTTTCTCGCTTCCTGAACCGGATAATAGTTG 545176 Query 76178 ATATCTATAATTTTATTGAGATTTCTGACAACTACTT---TAACCACGTCCTTTAGTTTG 76234 || || ||||| || || | |||||| ||||| |||| ||||| ||| || || Sbjct 545177 ATGTCAATAATCTTGTTCAAATTTCTAACAACAACTTGGGTAACCTCGTGA---AGCTTT 545233 Query 76235 AGAAAATCAAATTTTCCATCTATCACA--AACATA--TTA--AGAGCTATAGATGCTAGA 76288 | ||||| | | || || ||| |||| | || | ||| ||||| || | Sbjct 545234 TGGAAATCGTAAGTGCCCTCATTCATGTTAACAAAAGTTGGCAAAGCGATAGAAGCCAAG 545293 Query 76289 TTACAAACGGCTACCTCATTAGCATTGGCATATTGTATTATCTCCGTGCATAGATTACTA 76348 |||||| || ||||||| | | || | | ||||||||||| | || Sbjct 545294 TTACAACAAGCAACCTCATCCGGCGCAGAGTACTCAACGATCTCCGTGCACAAGTTGGAG 545353 Query 76349 CACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGA 76408 | |||||||| || || | |||||| ||||| ||||| |||| || || ||||| Sbjct 545354 CTGCGAATAGTTCCTAGGTTCTTTTGGTTACTCTTCTTGTTGCATGCATCTTTGTAAAGC 545413 Query 76409 ACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCT 76468 | || ||| |||| || || | || | |||| |||||| | ||| | | ||| Sbjct 545414 ATGAAAGGATTTCCTGTCTCGGTTTGCGCCTCGAGAATAGAGTACCAAAGCTTTTGAGCC 545473 Query 76469 TTTATTATAGATTTGTATCGCTTCTCT--CTT-TCATAT-TGTG-TATATAACCGTTCAA 76523 || || | ||| | ||| | ||| || || | | || | | || |||| Sbjct 545474 TTAATGGTC---TTGCGACCCTTGCCAGCCTTCTCGTAACTCTCATAGAGAGCC--TCAA 545528 Query 76524 ATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGACCACT 76583 | || || || |||| || ||||||| ||||||||||| || ||||| | | ||| | Sbjct 545529 ACTCCTCGCCATAAACGTCTGCCAAACCCGGACATTCATTGGGGCACATAAGGGTCCAGT 545588 Query 76584 CACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGAT 76643 | || | | | ||| || ||||| ||||||||||| ||||| | ||| || |||| Sbjct 545589 CTCCGTTCTTTTCAACACGCTTCATGAAGAGATCAGGAATCCACAAGGCATAGAAGAGAT 545648 Query 76644 CTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATAT 76703 | || | | | |||||| || || |||||| ||||| |||||||| | || || Sbjct 545649 CACGTGCGCGAACTTCTTCCTTACCATGATTCTTGCGTAGATCAAGGAACTCGAAAACAT 545708 Query 76704 CAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGAT 76763 | | ||||||||| || || || | || | | |||| || || || ||||| || || | Sbjct 545709 CGGCATGCCATGGCTCAAGGTAAACAGCAAAAGCACCAGGGCGCTTGTTACCACCTTGGT 545768 Query 76764 CTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTAC 76823 | | ||||||||| ||||| || |||||| | ||| |||| ||||||||| || | | Sbjct 545769 CAACATATCTGGCGGTGTTGTTGAAAACTCGGAGCATGGGAACAATGCCGTTGGAATTTC 545828 Query 76824 CATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTATTC 76883 | || || || | ||||| ||| ||||| || | ||| || || || | Sbjct 545829 CGTTGGTACCGGCGATATAGGCACCAGTAGCACGGATTCTGTGAATGTTGAGACCAATAC 545888 Query 76884 CTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATAC 76943 | || || | || ||||| | ||||| ||||| ||||| || || || || |||| Sbjct 545889 CACCGGCATTCTTTGAGATCATGGCACAAATCTTCAAAGTGTCGTAAATACCATCGATAC 545948 Query 76944 TATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCAT 77003 |||| || |||||| | || || || ||| | ||| || || || ||| Sbjct 545949 TATCTTCTTTCATGTCGATGAGGAAGCACGAAGAAAGTTGTGCCTGTGGGGTACCCGCAG 546008 Query 77004 TAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAA 77063 || | ||| || || ||||| || || | || | || | || ||||||||| |||| Sbjct 546009 AGAAGAGTGTTGGGGAGGCATGTGTAAAGTACTTGTTTGACATTAAATTGTATGTCTCAA 546068 Query 77064 TAACTGCTTCTATATC-CCATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGA 77122 | | || ||||| || | ||||| || || || |||||||| | ||| || || Sbjct 546069 TGGCACTCTCAATATCATCACCG-TGAATACCAACCGCAACACGCATGATCATTTGTTGT 546127 Query 77123 GGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAA 77182 || |||||| || || || | | | ||||||| || | ||| || ||| Sbjct 546128 GGACGTTCTGCAACTTTGCCATCGAGACGTAGAAGGTATGATCGCTCAAGAGTCTTGAAA 546187 Query 77183 CCAAAATAGTTGTA--TGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGTTTGTCCT 77240 || || || | ||| ||||| |||| ||||| | ||| | || || |||| || | Sbjct 546188 CCGAAGTATTGGTAGTTGAAA--TCTCGATCGTAGACTATAGCAGAGTTGAGTTCCTCTT 546245 Query 77241 TATATTTGGTAACAATATCCA---TGACAGTGGTAGAAATAATTGGAGATCGTATTCCAT 77297 || | | ||||| || | | | || | ||| || |||||| || | |||| Sbjct 546246 CATGTCTCATAACACATTCAAATGTTTCTTTGCT---AATCATAGGAGATGGTGTGCCAT 546302 Query 77298 TTTTAGGATTAACATAGTTAAATAAGTCTTCCATTACGTCGCTAAATAGtttttttGTTT 77357 || | || || ||| | | |||| || || |||| ||| |||| || |||| Sbjct 546303 TTCTTGGGTTTGTATATTGATATAAATCGCGGATAACGTGAGAGAATTGTTTCTTGGTTT 546362 Query 77358 CCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATTGCATAGTCAGGATGT 77413 |||||| || || || || || || | ||||||||||| ||||| || |||||| Sbjct 546363 GCTTGTGGAGGTTAGAGACTGCAATACGGGCAGCTAGAATAGCATAATCGGGATGT 546418 >seq23 Length=743066 Score = 118 bits (130), Expect = 2e-21 Identities = 565/904 (63%), Gaps = 67/904 (7%) Strand=Plus/Plus Query 46339 TTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 46398 |||||||| || || || | |||||||| || || || ||||| |||| || ||||| Sbjct 463101 TTTTGGTAATCGCCAACTCTCTTCTCGAAGAAGTTGGTCTTGCCAGCCAAGGAGATATTC 463160 Query 46399 TCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATC 46458 ||||| || || || || || | | | || | ||| | || | | | Sbjct 463161 TCCATGAAGTCGAATGGGTTGGCAGATCTGTAGACTTTGTCGTTACCCAGAGCGAGGAGG 463220 Query 46459 AGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGT 46518 || | ||| |||||||| || || || ||||| | | |||||||| | ||| Sbjct 463221 AGACGATCAGCAACGAACTCGATGTATTGCTTCATGAGAGTGGAGTTCATTCCCAAGAGA 463280 Query 46519 TTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTATC 46578 || |||||||| || | ||| ||||| || || ||||| || | || | Sbjct 463281 GCACATGGAAGAGCCTCGGTCAAAAATTCTTGCTCGATTTCTACAGCTTCGGTGATGAC- 463339 Query 46579 GATGTT--ACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAA 46636 || || || | || || ||| ||||| | | ||| || | | ||||||| Sbjct 463340 -ATCTTGAACGGATTGCTTGGATGGGCGATGCTTGAGATGGGAGAAGAGGAGGCATGCAA 463398 Query 46637 AATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCA 46696 | ||| || |||||||| || | || | |||||| || || ||||| |||| || Sbjct 463399 AGTCAGTGTGGAGGCCTTCGTCACGGGAGATGAGTTCGTTGGAGAAAGTGAGTCCAGCCA 463458 Query 46697 TTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTT 46756 | || |||||||| || ||||| || || | ||||| ||||| || ||||| || |||| Sbjct 463459 TGAGACCACGCTTCTTAAGCCAGAAGATGGAGGCGAAGGATCCGGAGAAGAAAATACCTT 463518 Query 46757 CTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTAT---GAATCCACC 46813 | || || ||||| ||||| || | | | || | | || || | ||||||| Sbjct 463519 CAACGGCGGCGAAAGCGACGAGACGTTGAGCAAAAGTAGAATTCTTGTCTTGAATCCA-- 463576 Query 46814 TTTGA--GCCCAATCAGCCTTTTTCTTTACACAAGGCA---------TTGTT-------- 46854 ||||| ||||| || ||||| ||||| | ||||| | ||||| Sbjct 463577 TTTGACAGCCCAGTCGGCCTTCTTCTTGATGCAAGGAACTATCAAGGTTGTTAGATTGTA 463636 Query 46855 ----------------------------------TCTATAGCATTAAAGAGAAAGttttt 46880 || ||||| || || ||| | | || Sbjct 463637 CATCGCAGATGGGTGGGTTTATAACTTACTGGTATCGATAGCGTTGAATAGATATGTCTT 463696 Query 46881 ttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTT 46940 || | || || | |||||| || || | ||| || |||| || |||||||| Sbjct 463697 TTGTGCTTGTTCCTTGATATATGTGTCGATGAGAAGCGAGTATGTTTCAGAGTGAATGTT 463756 Query 46941 TTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACA 47000 || || || || |||||||| || ||||||||||| | || || || || || Sbjct 463757 CTCCATCATGATTTGGAATCCGTAGAAGCATCTTGCTTCTGGGATTTGAACTTCACCACT 463816 Query 47001 AAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATAC 47060 ||||| ||| ||| || ||||| || ||||| || ||||| || ||||| | || Sbjct 463817 GAATCGCTCAACCAAGTTTTCATTGACAATTCCGTCGGATGCAGCGAAGAATGCGAGAAC 463876 Query 47061 ATGTTTAATAAAATA---TTTTTCATCGGT-AGTCAGTTTATTCCAGTCATTGATATCTT 47116 || ||||| || | ||||| | |||| | || |||||||| | | ||| | Sbjct 463877 GTGGGAGATAAAGTAGCGCTCGTCATCATTGAGTCTG-TTGTTCCAGTCGTGTAGATCCT 463935 Query 47117 TTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCC 47176 |||| | ||| | ||||| || |||||||| || || ||||| || || ||||| | || Sbjct 463936 TTGACAGATCAATCTCTTCTGCGGTCCAGAAAGATGCTTCTGCCTTCTTGTACATCTGCC 463995 Query 47177 ATAT 47180 | || Sbjct 463996 AGAT 463999 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712926860718720