Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31] 846 sequences; 44,684,193 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq27 131 4e-25 seq11 113 1e-19 seq54 84.2 5e-11 >seq27 Length=671268 Score = 131 bits (144), Expect = 4e-25 Identities = 157/210 (75%), Gaps = 5/210 (2%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| || |||||||||||||||||||| |||| | ||| | ||||| || | Sbjct 263821 CAAG-TGAAGGGTGGACTCTTTTTGGATGTTGTAGTCGGAAAGAGTACGGCCATCCTCAA 263879 Query 151957 G--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014 | ||||| || |||||||| | | ||| ||||| | | |||||| ||||| || || Sbjct 263880 GTTGCTTT--CCAGCGAAGATCAATCGCTGTTGGTCGGGTGGGATTCCCTCCTTGTCCTG 263937 Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074 || || |||||| | || | | |||| ||| ||| || || || || || ||||| Sbjct 263938 GATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATGGTTTT 263997 Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 |||||| || ||||| ||||||| |||||| Sbjct 263998 GCCCGTAAGGGTCTTGACGAAGATCTGCAT 264027 >seq11 Length=1281110 Score = 113 bits (124), Expect = 1e-19 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| | ||| | |||||| || ||||||||||||||||| | | || | |||||| Sbjct 151495 AGGACCAAATGTAAAGTAGATTCCTTTTGGATGTTGTAATCCGAAAGGGTGCGGCCATCT 151436 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || ||| || ||||||||||| | || ||||| | | |||||| ||||| ||| Sbjct 151435 TCAAGTTGTTTACCAGCGAAGATAAGACGTTGTTGGTCGGGTGGGATTCCCTCCTTGTCT 151376 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||| || || ||| | || | | | || || ||| || || | ||| || || Sbjct 151375 TGAATCTTAGACTTTACATTATCGATGGTATCCGACGACTCAACCTCCAAAGTGATGGTC 151316 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || | |||||| ||||| | |||||| Sbjct 151315 TTTCCGGTTAAAGTCTTGACGAAAATCTGCAT 151284 >seq54 Length=188590 Score = 84.2 bits (92), Expect = 5e-11 Identities = 131/183 (72%), Gaps = 6/183 (3%) Strand=Plus/Plus Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAG--GCTTTTCCCGGCGAAGA 151974 |||||||||||||| || | | ||| | || || || || ||||| || ||||||| Sbjct 62443 TTTTGGATGTTGTAGTCTGAGAGAGTACGTCCGTCCTCAAGTTGCTTT--CCAGCGAAGA 62500 Query 151975 T-AAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTC 152033 | |||| | || ||||| | | ||||| ||||| || || || || |||||| | Sbjct 62501 TCAAGCGT-TGTTGGTCGGGAGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTG 62559 Query 152034 TCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACG 152093 || | | |||| || ||| || ||||| || || || |||||||| || ||||| ||| Sbjct 62560 TCGATGGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACG 62619 Query 152094 AAG 152096 ||| Sbjct 62620 AAG 62622 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153808293303666