Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31]
846 sequences; 44,684,193 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq27 131 4e-25
seq11 113 1e-19
seq54 84.2 5e-11
>seq27
Length=671268
Score = 131 bits (144), Expect = 4e-25
Identities = 157/210 (75%), Gaps = 5/210 (2%)
Strand=Plus/Plus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| ||||| || |||||||||||||||||||| |||| | ||| | ||||| || |
Sbjct 263821 CAAG-TGAAGGGTGGACTCTTTTTGGATGTTGTAGTCGGAAAGAGTACGGCCATCCTCAA 263879
Query 151957 G--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014
| ||||| || |||||||| | | ||| ||||| | | |||||| ||||| || ||
Sbjct 263880 GTTGCTTT--CCAGCGAAGATCAATCGCTGTTGGTCGGGTGGGATTCCCTCCTTGTCCTG 263937
Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074
|| || |||||| | || | | |||| ||| ||| || || || || || |||||
Sbjct 263938 GATCTTGGACTTGACATTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATGGTTTT 263997
Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|||||| || ||||| ||||||| ||||||
Sbjct 263998 GCCCGTAAGGGTCTTGACGAAGATCTGCAT 264027
>seq11
Length=1281110
Score = 113 bits (124), Expect = 1e-19
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
||||| | ||| | |||||| || ||||||||||||||||| | | || | ||||||
Sbjct 151495 AGGACCAAATGTAAAGTAGATTCCTTTTGGATGTTGTAATCCGAAAGGGTGCGGCCATCT 151436
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || ||| || ||||||||||| | || ||||| | | |||||| ||||| |||
Sbjct 151435 TCAAGTTGTTTACCAGCGAAGATAAGACGTTGTTGGTCGGGTGGGATTCCCTCCTTGTCT 151376
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
||||| || || ||| | || | | | || || ||| || || | ||| || ||
Sbjct 151375 TGAATCTTAGACTTTACATTATCGATGGTATCCGACGACTCAACCTCCAAAGTGATGGTC 151316
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || | |||||| ||||| | ||||||
Sbjct 151315 TTTCCGGTTAAAGTCTTGACGAAAATCTGCAT 151284
>seq54
Length=188590
Score = 84.2 bits (92), Expect = 5e-11
Identities = 131/183 (72%), Gaps = 6/183 (3%)
Strand=Plus/Plus
Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAG--GCTTTTCCCGGCGAAGA 151974
|||||||||||||| || | | ||| | || || || || ||||| || |||||||
Sbjct 62443 TTTTGGATGTTGTAGTCTGAGAGAGTACGTCCGTCCTCAAGTTGCTTT--CCAGCGAAGA 62500
Query 151975 T-AAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTC 152033
| |||| | || ||||| | | ||||| ||||| || || || || |||||| |
Sbjct 62501 TCAAGCGT-TGTTGGTCGGGAGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTG 62559
Query 152034 TCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACG 152093
|| | | |||| || ||| || ||||| || || || |||||||| || ||||| |||
Sbjct 62560 TCGATGGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACG 62619
Query 152094 AAG 152096
|||
Sbjct 62620 AAG 62622
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153808293303666
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |