Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31]
846 sequences; 44,684,193 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq27 118 8e-22
seq11 105 5e-18
seq54 102 6e-17
>seq27
Length=671268
Score = 118 bits (130), Expect = 8e-22
Identities = 157/216 (73%), Gaps = 4/216 (2%)
Strand=Plus/Plus
Query 44126 AACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCG 44185
||||||| |||||| ||| ||| |||||||||||||| |||| || || | ||
Sbjct 263816 AACACCAAGTGAAGGGTGGACTCTTTTTGGATGTTGTAGTCGGAAAGAGTACGGCCATCC 263875
Query 44186 TCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCC 44245
|| || ||||| || || |||||||| ||||| || || | || | || ||||| |||
Sbjct 263876 TCAAGTTGCTTTCCAGCGAAGATCAATCGCTGTTGGTCGGGTGGGATTCCCTCCTTGTCC 263935
Query 44246 GTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCG 44303
||||| ||| || ||| | |||||||| | || || ||||| | || || |
Sbjct 263936 TGGATCTTGGACTTGACATTGT--CGATGGTGTCCGAAGACTCAACCTCGAGGGTGATGG 263993
Query 44304 TCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGA 44339
| || ||||| |||||||| |||||||| |||||||
Sbjct 263994 TTTTGCCCGTAAGGGTCTTGACGAAGATCTGCATGA 264029
>seq11
Length=1281110
Score = 105 bits (116), Expect = 5e-18
Identities = 157/220 (71%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || | ||||| | |||| ||| || || ||||| || || ||||||||
Sbjct 151286 CATACCACCGCGAAGTCTAAGGACCAAGTGGAGGGTAGATTCCTTCTGAATATTGTAATC 151227
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| ||| ||| | || || || ||||| ||||| ||||||||||| || ||||| |
Sbjct 151226 GGAGAGGGTGCGACCATCCTCAAGTTGCTTTCCGGCGAAGATCAAACGTTGTTGATCGGG 151167
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATT 44285
|| | || ||||| || |||||| ||| || ||| | || ||||| | ||||
Sbjct 151166 GGGAATTCCCTCCTTGTCTTGAATCTTCGACTT-AACGTTATCGATAGTGTCAGAAGATT 151108
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325
| ||||| | ||| || |||||||| ||||| ||||| ||
Sbjct 151107 CAACCTCGAGCGTGATGGTCTTTCCGGTGAGTGTCTTAAC 151068
Score = 100 bits (110), Expect = 2e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||||| ||| | ||||| |||||||| |||||||| |||| ||| | | || ||
Sbjct 151721 CACCAAGTGCAAGGTGCTTTCCTTTTGAATGTTGTAGTCGGAAAGTGTTCTACCATCCTC 151662
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
|| |||||| || ||||||||||| | ||| || || | || | ||| ||||| |||
Sbjct 151661 CAACTGCTTTCCTGCAAAGATCAATCTCTGTTGGTCAGGGGGGATACCCTCCTTATCCTG 151602
Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| ||| | | | || || || | ||||| || || | ||||| |||||
Sbjct 151601 AATCTTTGACTTGACATTATCAATAGTATCTGACGATTCAACTTCTAATGTAATTGTCTT 151542
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || | ||||| || |||||||||||
Sbjct 151541 CCCAGTCAAAGTCTTAACAAAGATTTGCAT 151512
>seq54
Length=188590
Score = 102 bits (112), Expect = 6e-17
Identities = 134/184 (73%), Gaps = 4/184 (2%)
Strand=Plus/Plus
Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207
|||||||||||||||| || | ||| || |||| || || ||||| || || ||||
Sbjct 62441 CCTTTTGGATGTTGTAGTCTGAGAGAGTACGTCCGTCCTCAAGTTGCTTTCCAGCGAAGA 62500
Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGT 44265
|||| || || || || | ||| | || ||||| ||| ||||| ||| || |||
Sbjct 62501 TCAAGCGTTGTTGGTCGGGAGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 62560
Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325
| |||||||| | ||| || ||||| | || || ||||| ||||| |||||||| ||
Sbjct 62561 --CGATGGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGAC 62618
Query 44326 GAAG 44329
||||
Sbjct 62619 GAAG 62622
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359986688273982
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |