Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31] 846 sequences; 44,684,193 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq27 118 8e-22 seq11 105 5e-18 seq54 102 6e-17 >seq27 Length=671268 Score = 118 bits (130), Expect = 8e-22 Identities = 157/216 (73%), Gaps = 4/216 (2%) Strand=Plus/Plus Query 44126 AACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCG 44185 ||||||| |||||| ||| ||| |||||||||||||| |||| || || | || Sbjct 263816 AACACCAAGTGAAGGGTGGACTCTTTTTGGATGTTGTAGTCGGAAAGAGTACGGCCATCC 263875 Query 44186 TCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCC 44245 || || ||||| || || |||||||| ||||| || || | || | || ||||| ||| Sbjct 263876 TCAAGTTGCTTTCCAGCGAAGATCAATCGCTGTTGGTCGGGTGGGATTCCCTCCTTGTCC 263935 Query 44246 GTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCG 44303 ||||| ||| || ||| | |||||||| | || || ||||| | || || | Sbjct 263936 TGGATCTTGGACTTGACATTGT--CGATGGTGTCCGAAGACTCAACCTCGAGGGTGATGG 263993 Query 44304 TCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGA 44339 | || ||||| |||||||| |||||||| ||||||| Sbjct 263994 TTTTGCCCGTAAGGGTCTTGACGAAGATCTGCATGA 264029 >seq11 Length=1281110 Score = 105 bits (116), Expect = 5e-18 Identities = 157/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | ||||| | |||| ||| || || ||||| || || |||||||| Sbjct 151286 CATACCACCGCGAAGTCTAAGGACCAAGTGGAGGGTAGATTCCTTCTGAATATTGTAATC 151227 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || ||| ||| | || || || ||||| ||||| ||||||||||| || ||||| | Sbjct 151226 GGAGAGGGTGCGACCATCCTCAAGTTGCTTTCCGGCGAAGATCAAACGTTGTTGATCGGG 151167 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATT 44285 || | || ||||| || |||||| ||| || ||| | || ||||| | |||| Sbjct 151166 GGGAATTCCCTCCTTGTCTTGAATCTTCGACTT-AACGTTATCGATAGTGTCAGAAGATT 151108 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | ||||| | ||| || |||||||| ||||| ||||| || Sbjct 151107 CAACCTCGAGCGTGATGGTCTTTCCGGTGAGTGTCTTAAC 151068 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||| ||| | ||||| |||||||| |||||||| |||| ||| | | || || Sbjct 151721 CACCAAGTGCAAGGTGCTTTCCTTTTGAATGTTGTAGTCGGAAAGTGTTCTACCATCCTC 151662 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 || |||||| || ||||||||||| | ||| || || | || | ||| ||||| ||| Sbjct 151661 CAACTGCTTTCCTGCAAAGATCAATCTCTGTTGGTCAGGGGGGATACCCTCCTTATCCTG 151602 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||| | | | || || || | ||||| || || | ||||| ||||| Sbjct 151601 AATCTTTGACTTGACATTATCAATAGTATCTGACGATTCAACTTCTAATGTAATTGTCTT 151542 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || | ||||| || ||||||||||| Sbjct 151541 CCCAGTCAAAGTCTTAACAAAGATTTGCAT 151512 >seq54 Length=188590 Score = 102 bits (112), Expect = 6e-17 Identities = 134/184 (73%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207 |||||||||||||||| || | ||| || |||| || || ||||| || || |||| Sbjct 62441 CCTTTTGGATGTTGTAGTCTGAGAGAGTACGTCCGTCCTCAAGTTGCTTTCCAGCGAAGA 62500 Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGT 44265 |||| || || || || | ||| | || ||||| ||| ||||| ||| || ||| Sbjct 62501 TCAAGCGTTGTTGGTCGGGAGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 62560 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | |||||||| | ||| || ||||| | || || ||||| ||||| |||||||| || Sbjct 62561 --CGATGGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGAC 62618 Query 44326 GAAG 44329 |||| Sbjct 62619 GAAG 62622 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359986688273982