Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31]
846 sequences; 44,684,193 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq27 154 4e-32
seq11 143 6e-29
seq54 129 1e-24
>seq27
Length=671268
Score = 154 bits (170), Expect = 4e-32
Identities = 158/205 (77%), Gaps = 1/205 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || || || || || ||||| |||||||||||||| || || |||
Sbjct 264024 CAGATCTTCGTCAAGACCCTTACGGGCAAAACCATCACCCTCGAGGTTGAGTCTTCGGAC 263965
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || ||||| ||||| |||||||| || |||||||| || ||||| ||
Sbjct 263964 ACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATCCCACCCGACCAACAG 263905
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||| | |||||||| ||||| || || || ||||| | |||||| |||| || ||| ||
Sbjct 263904 CGATTGATCTTCGCTGGAAAGCAACTTGAGGATGGCCGTACTCTTTCCGACTACAACATC 263845
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|||||||| || || || || ||||
Sbjct 263844 CAAAAAGAGTCCACCCTTCA-CTTG 263821
>seq11
Length=1281110
Score = 143 bits (158), Expect = 6e-29
Identities = 148/194 (76%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||| || ||| | || ||||| || ||||| | ||||| || || ||
Sbjct 151287 CAGATTTTCGTCAAGACTTTAACCGGAAAGACCATCACTTTGGAGGTTGAGTCGTCGGAT 151346
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || || || |||||||| ||||| || |||||||| || ||||| |||
Sbjct 151347 ACCATCGATAATGTAAAGTCTAAGATTCAAGACAAGGAGGGAATCCCACCCGACCAACAA 151406
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| ||||||||||| || ||||| || |||||||| | || ||| | ||||| ||| ||
Sbjct 151407 CGTCTTATCTTCGCTGGTAAACAACTTGAAGATGGCCGCACCCTTTCGGATTACAACATC 151466
Query 178104 CAAAAAGAATCAAC 178117
||||| ||||| ||
Sbjct 151467 CAAAAGGAATCTAC 151480
Score = 125 bits (138), Expect = 2e-23
Identities = 146/196 (74%), Gaps = 1/196 (1%)
Strand=Plus/Plus
Query 177933 GTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAG 177992
|| || || ||||| ||||| || ||||| |||||||| ||| || ||||| |||||
Sbjct 151068 GTTAAGACACTCACCGGAAAGACCATCACGCTCGAGGTTGAATCTTCTGACACTATCGAT 151127
Query 177993 AACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATC 178052
||||| || |||||||| ||||| || ||||| || || || || ||||| | |||
Sbjct 151128 AACGTTAAGTCGAAGATTCAAGACAAGGAGGGAATTCCCCCCGATCAACAACGTTTGATC 151187
Query 178053 TTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAA 178112
||||||||||| || || || ||||| | || || ||||||| || | || || |||
Sbjct 151188 TTCGCCGGAAAGCAACTTGAGGATGGTCGCACCCTCTCCGATTACAATATTCAGAAGGAA 151247
Query 178113 TCAACACTGCATCTTG 178128
|| || || || ||||
Sbjct 151248 TCTACCCTCCA-CTTG 151262
Score = 102 bits (112), Expect = 2e-16
Identities = 136/189 (72%), Gaps = 0/189 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || || || ||| | || || || || || || | || || ||| |||||
Sbjct 151515 CAAATCTTTGTTAAGACTTTGACTGGGAAGACAATTACATTAGAAGTTGAATCGTCAGAT 151574
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || ||||| |||||||||||| || || || ||||| || ||||| ||
Sbjct 151575 ACTATTGATAATGTCAAGTCAAAGATTCAGGATAAGGAGGGTATCCCCCCTGACCAACAG 151634
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||| || ||||| ||| | || ||||| || || ||| |||| || ||| |
Sbjct 151635 AGATTGATCTTTGCAGGAAAGCAGTTGGAGGATGGTAGAACACTTTCCGACTACAACATT 151694
Query 178104 CAAAAAGAA 178112
||||| |||
Sbjct 151695 CAAAAGGAA 151703
Score = 89.7 bits (98), Expect = 1e-12
Identities = 136/190 (72%), Gaps = 8/190 (4%)
Strand=Plus/Plus
Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACACCATCGAGAACGTCAAA 178001
|| || || || |||||||| ||||| || ||| || || || || || || ||
Sbjct 150797 ACTGGCAAGACCATCACCCTTGAGGTCGAGTCGAGC---GATACAATTGATAATGTTAAG 150853
Query 178002 CAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGA 178061
||||| |||||||| || |||||||| || ||||| || || | || |||||||||
Sbjct 150854 TCTAAGATCCAGGACAAGGAGGGAATCCCCCCCGACCAACAGCGTTTGATTTTCGCCGGA 150913
Query 178062 AAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGTCCAAAAAGAATCAACACT 178120
||||| || || ||||| | || |||| || || ||| | ||||| || || || ||
Sbjct 150914 AAACAACTTGAGGATGGTCGCAC-CTTGAGTGACTACAACATTCAAAAGGAGTCCACTCT 150972
Query 178121 GCATCTTGTT 178130
||||| |||
Sbjct 150973 CCATCTCGTT 150982
>seq54
Length=188590
Score = 129 bits (142), Expect = 1e-24
Identities = 136/179 (76%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989
||||| || || || || || || || |||||||| ||||| || ||| |||||||||
Sbjct 62621 TTCGTCAAGACCCTTACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCTGACACCATC 62562
Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049
|| || ||||| ||||| |||||||| || ||||| ||||| ||||| ||||| |
Sbjct 62561 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCTCCCGACCAACAACGCTTG 62502
Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108
|||||||| ||||| || || || || ||| | ||||| | || || ||| |||||||
Sbjct 62501 ATCTTCGCTGGAAAGCAACTTGAGGACGGACGTACTCTCTCAGACTACAACATCCAAAA 62443
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203718152306124
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |