Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31] 846 sequences; 44,684,193 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq27 154 4e-32 seq11 143 6e-29 seq54 129 1e-24 >seq27 Length=671268 Score = 154 bits (170), Expect = 4e-32 Identities = 158/205 (77%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || || || || ||||| |||||||||||||| || || ||| Sbjct 264024 CAGATCTTCGTCAAGACCCTTACGGGCAAAACCATCACCCTCGAGGTTGAGTCTTCGGAC 263965 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| ||||| |||||||| || |||||||| || ||||| || Sbjct 263964 ACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATCCCACCCGACCAACAG 263905 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | |||||||| ||||| || || || ||||| | |||||| |||| || ||| || Sbjct 263904 CGATTGATCTTCGCTGGAAAGCAACTTGAGGATGGCCGTACTCTTTCCGACTACAACATC 263845 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 |||||||| || || || || |||| Sbjct 263844 CAAAAAGAGTCCACCCTTCA-CTTG 263821 >seq11 Length=1281110 Score = 143 bits (158), Expect = 6e-29 Identities = 148/194 (76%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || ||| | || ||||| || ||||| | ||||| || || || Sbjct 151287 CAGATTTTCGTCAAGACTTTAACCGGAAAGACCATCACTTTGGAGGTTGAGTCGTCGGAT 151346 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || || || |||||||| ||||| || |||||||| || ||||| ||| Sbjct 151347 ACCATCGATAATGTAAAGTCTAAGATTCAAGACAAGGAGGGAATCCCACCCGACCAACAA 151406 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||||||||| || ||||| || |||||||| | || ||| | ||||| ||| || Sbjct 151407 CGTCTTATCTTCGCTGGTAAACAACTTGAAGATGGCCGCACCCTTTCGGATTACAACATC 151466 Query 178104 CAAAAAGAATCAAC 178117 ||||| ||||| || Sbjct 151467 CAAAAGGAATCTAC 151480 Score = 125 bits (138), Expect = 2e-23 Identities = 146/196 (74%), Gaps = 1/196 (1%) Strand=Plus/Plus Query 177933 GTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAG 177992 || || || ||||| ||||| || ||||| |||||||| ||| || ||||| ||||| Sbjct 151068 GTTAAGACACTCACCGGAAAGACCATCACGCTCGAGGTTGAATCTTCTGACACTATCGAT 151127 Query 177993 AACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATC 178052 ||||| || |||||||| ||||| || ||||| || || || || ||||| | ||| Sbjct 151128 AACGTTAAGTCGAAGATTCAAGACAAGGAGGGAATTCCCCCCGATCAACAACGTTTGATC 151187 Query 178053 TTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAA 178112 ||||||||||| || || || ||||| | || || ||||||| || | || || ||| Sbjct 151188 TTCGCCGGAAAGCAACTTGAGGATGGTCGCACCCTCTCCGATTACAATATTCAGAAGGAA 151247 Query 178113 TCAACACTGCATCTTG 178128 || || || || |||| Sbjct 151248 TCTACCCTCCA-CTTG 151262 Score = 102 bits (112), Expect = 2e-16 Identities = 136/189 (72%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || ||| | || || || || || || | || || ||| ||||| Sbjct 151515 CAAATCTTTGTTAAGACTTTGACTGGGAAGACAATTACATTAGAAGTTGAATCGTCAGAT 151574 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || ||||| |||||||||||| || || || ||||| || ||||| || Sbjct 151575 ACTATTGATAATGTCAAGTCAAAGATTCAGGATAAGGAGGGTATCCCCCCTGACCAACAG 151634 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| || ||||| ||| | || ||||| || || ||| |||| || ||| | Sbjct 151635 AGATTGATCTTTGCAGGAAAGCAGTTGGAGGATGGTAGAACACTTTCCGACTACAACATT 151694 Query 178104 CAAAAAGAA 178112 ||||| ||| Sbjct 151695 CAAAAGGAA 151703 Score = 89.7 bits (98), Expect = 1e-12 Identities = 136/190 (72%), Gaps = 8/190 (4%) Strand=Plus/Plus Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACACCATCGAGAACGTCAAA 178001 || || || || |||||||| ||||| || ||| || || || || || || || Sbjct 150797 ACTGGCAAGACCATCACCCTTGAGGTCGAGTCGAGC---GATACAATTGATAATGTTAAG 150853 Query 178002 CAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGA 178061 ||||| |||||||| || |||||||| || ||||| || || | || ||||||||| Sbjct 150854 TCTAAGATCCAGGACAAGGAGGGAATCCCCCCCGACCAACAGCGTTTGATTTTCGCCGGA 150913 Query 178062 AAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGTCCAAAAAGAATCAACACT 178120 ||||| || || ||||| | || |||| || || ||| | ||||| || || || || Sbjct 150914 AAACAACTTGAGGATGGTCGCAC-CTTGAGTGACTACAACATTCAAAAGGAGTCCACTCT 150972 Query 178121 GCATCTTGTT 178130 ||||| ||| Sbjct 150973 CCATCTCGTT 150982 >seq54 Length=188590 Score = 129 bits (142), Expect = 1e-24 Identities = 136/179 (76%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989 ||||| || || || || || || || |||||||| ||||| || ||| ||||||||| Sbjct 62621 TTCGTCAAGACCCTTACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCTGACACCATC 62562 Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049 || || ||||| ||||| |||||||| || ||||| ||||| ||||| ||||| | Sbjct 62561 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCTCCCGACCAACAACGCTTG 62502 Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108 |||||||| ||||| || || || || ||| | ||||| | || || ||| ||||||| Sbjct 62501 ATCTTCGCTGGAAAGCAACTTGAGGACGGACGTACTCTCTCAGACTACAACATCCAAAA 62443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203718152306124