Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31]
846 sequences; 44,684,193 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq27 123 2e-23
seq11 93.3 4e-14
>seq27
Length=671268
Score = 123 bits (136), Expect = 2e-23
Identities = 169/234 (72%), Gaps = 4/234 (2%)
Strand=Plus/Plus
Query 41632 ACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTC 41691
||| || || || ||||||||||||| || || ||| ||| || || ||||| |||||
Sbjct 263797 ACCACCACCACGGAGACGTAACACCAAGTGAAGGGTGGACTCTTTTTGGATGTTGTAGTC 263856
Query 41692 GGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC 41751
||| || || || | || || || ||||| || ||||| |||| ||||||||||| |
Sbjct 263857 GGAAAGAGTACGGCCATCCTCAAGTTGCTTTCCAGCGAAGATCAATCGCTGTTGGTCGGG 263916
Query 41752 GGGAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGAC 41809
|| | | |||||||||| ||| || ||| || | || | ||||| |||
Sbjct 263917 TGGGATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG--ATGGTGTCCGAAGAC 263974
Query 41810 TCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
|| ||||| | || || ||||| ||||| || ||||| ||||| |||||||||
Sbjct 263975 TCAACCTCGAGGGTGATGGTTTTGCCCGTAAGGGTCTTGACGAAGATCTGCATG 264028
>seq11
Length=1281110
Score = 93.3 bits (102), Expect = 4e-14
Identities = 130/180 (72%), Gaps = 2/180 (1%)
Strand=Plus/Minus
Query 41672 TCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 41731
||||||||||| || || |||||||||||||| | || || || ||||| ||||||||
Sbjct 151246 TCCTTCTGAATATTGTAATCGGAGAGGGTGCGACCATCCTCAAGTTGCTTTCCGGCGAAG 151187
Query 41732 ATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGAC 41791
|||| || ||||| || | ||||| | |||||||| | ||| | || | | ||||
Sbjct 151186 ATCAAACGTTGTTGATCGGGGGGAATTCCCTCCTTGT-CTTGAATCTTCGACTTAACGTT 151128
Query 41792 GAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850
| | |||||| || || ||||| | ||| || || || || || || ||||| ||
Sbjct 151127 ATCGATAGTGTCAGAAGATTCAACCTCGAGCGTGATGGTCTTTCCGGTGAGTGTCTTAAC 151068
Score = 91.5 bits (100), Expect = 1e-13
Identities = 144/204 (71%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | || ||||| || ||| |||||| |||||||| |||||
Sbjct 150999 CCACCACGAAGACGGAGAACGAGATGGAGAGTGGACTCCTTTTGAATGTTGTAGTCACTC 150940
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
| |||||| | || || || || || |||||||| |||| ||||||||||| | |||
Sbjct 150939 AAGGTGCGACCATCCTCAAGTTGTTTTCCGGCGAAAATCAAACGCTGTTGGTCGGGGGGG 150880
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCA-ACGACGACACAGTGTCGCTCGACTCCAC 41814
| | |||||||||| ||| || ||| | | | | | || ||||||||||| ||
Sbjct 150879 ATTCCCTCCTTGTCCTGGATCTTAGACTTAACATTATCA-ATTGTATCGCTCGACTCGAC 150821
Query 41815 CTCCACCGTTATCGTTTTACCCGT 41838
||| | || || || || || ||
Sbjct 150820 CTCAAGGGTGATGGTCTTGCCAGT 150797
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462299111135200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |