Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monilinia_20fructicola_20[genbank_20GCA_5F002162545.1_202017-05-31] 846 sequences; 44,684,193 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq27 123 2e-23 seq11 93.3 4e-14 >seq27 Length=671268 Score = 123 bits (136), Expect = 2e-23 Identities = 169/234 (72%), Gaps = 4/234 (2%) Strand=Plus/Plus Query 41632 ACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTC 41691 ||| || || || ||||||||||||| || || ||| ||| || || ||||| ||||| Sbjct 263797 ACCACCACCACGGAGACGTAACACCAAGTGAAGGGTGGACTCTTTTTGGATGTTGTAGTC 263856 Query 41692 GGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC 41751 ||| || || || | || || || ||||| || ||||| |||| ||||||||||| | Sbjct 263857 GGAAAGAGTACGGCCATCCTCAAGTTGCTTTCCAGCGAAGATCAATCGCTGTTGGTCGGG 263916 Query 41752 GGGAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGAC 41809 || | | |||||||||| ||| || ||| || | || | ||||| ||| Sbjct 263917 TGGGATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG--ATGGTGTCCGAAGAC 263974 Query 41810 TCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || ||||| | || || ||||| ||||| || ||||| ||||| ||||||||| Sbjct 263975 TCAACCTCGAGGGTGATGGTTTTGCCCGTAAGGGTCTTGACGAAGATCTGCATG 264028 >seq11 Length=1281110 Score = 93.3 bits (102), Expect = 4e-14 Identities = 130/180 (72%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 41672 TCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 41731 ||||||||||| || || |||||||||||||| | || || || ||||| |||||||| Sbjct 151246 TCCTTCTGAATATTGTAATCGGAGAGGGTGCGACCATCCTCAAGTTGCTTTCCGGCGAAG 151187 Query 41732 ATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGAC 41791 |||| || ||||| || | ||||| | |||||||| | ||| | || | | |||| Sbjct 151186 ATCAAACGTTGTTGATCGGGGGGAATTCCCTCCTTGT-CTTGAATCTTCGACTTAACGTT 151128 Query 41792 GAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850 | | |||||| || || ||||| | ||| || || || || || || ||||| || Sbjct 151127 ATCGATAGTGTCAGAAGATTCAACCTCGAGCGTGATGGTCTTTCCGGTGAGTGTCTTAAC 151068 Score = 91.5 bits (100), Expect = 1e-13 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || ||||| || ||| |||||| |||||||| ||||| Sbjct 150999 CCACCACGAAGACGGAGAACGAGATGGAGAGTGGACTCCTTTTGAATGTTGTAGTCACTC 150940 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | |||||| | || || || || || |||||||| |||| ||||||||||| | ||| Sbjct 150939 AAGGTGCGACCATCCTCAAGTTGTTTTCCGGCGAAAATCAAACGCTGTTGGTCGGGGGGG 150880 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCA-ACGACGACACAGTGTCGCTCGACTCCAC 41814 | | |||||||||| ||| || ||| | | | | | || ||||||||||| || Sbjct 150879 ATTCCCTCCTTGTCCTGGATCTTAGACTTAACATTATCA-ATTGTATCGCTCGACTCGAC 150821 Query 41815 CTCCACCGTTATCGTTTTACCCGT 41838 ||| | || || || || || || Sbjct 150820 CTCAAGGGTGATGGTCTTGCCAGT 150797 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462299111135200