Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09- 23] 491 sequences; 33,245,410 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq31 156 9e-33 >seq31 Length=267444 Score = 156 bits (172), Expect = 9e-33 Identities = 563/869 (65%), Gaps = 19/869 (2%) Strand=Plus/Plus Query 229780 ATGTGGGATATGTACAAGAAGGCGGTGGCAACTTTCTGGACCACTGAGGAAGTTCCTCTG 229839 || ||| | |||||||||||||| | |||| | ||||||||| | ||||| || |||| Sbjct 238150 ATCTGGCAGATGTACAAGAAGGCCGAGGCATCGTTCTGGACCGCAGAGGAGATTGATCTG 238209 Query 229840 AACGCAGACGTCGTCGACTGGCGTGAGAAACTCAATGACGACGAACGTCATTTCATCAAA 229899 | || | ||| ||| || ||||||||| ||||| || |||||| | Sbjct 238210 TCCAAGGATCTGCACGATTGGAACAAGCGACTCAATGATGACGAGCGATTCTTCATCTCA 238269 Query 229900 CACATCCTAGGTTTTTTCGCAGGCTCCGATGGTATTGTGATGGAAAATCT-GCAGACCAA 229958 ||| | || | ||| ||||||| || || || ||||| | || || || | || | Sbjct 238270 CACGTTCTCGCTTTCTTCGCAGCATCAGACGGCATTGTCAACGAGAACCTTGTCGAGCG- 238328 Query 229959 CTTTAGTGTGGAAGTAACGGTTCCAGAGGCACGGCAATTTTATGCTTACCAAACATTCAA 230018 ||| || || || | | ||||||||||| || |||| || ||| | | | Sbjct 238329 CTTCAGCTCTGAGGTTCAGATCCCAGAGGCACGATGCTTCTATGGTTTCCAGATCATGAT 238388 Query 230019 CGAATCTATCCATTCTGAACAATATGCTCTGCTTATCGACGCGCTTATTTCCGACGAGC- 230077 || ||||| || ||| ||| | || ||||| ||| | ||| || | ||||| Sbjct 238389 GGAGAACATCCACTCCGAAACATACTCCCTCCTTATTGACACA--TATATCAG-CGAGCC 238445 Query 230078 -AAGAACGGAACG-AGCTTTTTGATGCCATTGAAAACATCCCGGCGGTTCATAACAAGGC 230135 ||| | |||| | || || | ||||| || ||||||||| | | ||| ||||| Sbjct 238446 AAAGCAGCGAACATATCTGTTCAACGCCATCGATAACATCCCGTGCATCCGTAAGAAGGC 238505 Query 230136 AAAGTGGGCTCAGAAATGG--CTAGAACCTGGTAAAT----CGTTTGCCGAGCGTCTCGT 230189 | ||||| | |||| || | || |||| | || ||| || | || Sbjct 238506 TGACTGGGCGTTGCGATGGATCTCGGACAA---AAATTCCACATTCGCCCTCCGATTGGT 238562 Query 230190 CGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCGCCATCTTTTGGCT 230249 || | | |||||| ||||| | |||||||| ||| ||||||||| ||||| Sbjct 238563 TGCTTTCGCCGCTGTTGAGGGTATCTTCTTTTCCGGTTCCTTCGCCGCCATCTTCTGGCT 238622 Query 230250 GCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCATCAGTCGCGACGA 230309 | ||| ||| | ||| ||||||| | || |||||| | ||| || || || Sbjct 238623 GAAGAAGCGTGGTCTCATGGCTGGCCTTACATTCTCGAACGAGCTTATCTCCCGTGATGA 238682 Query 230310 GGGTCTCCATCAACAGTTCGGCGAGCTTATGTATTCAAAGCTCCAGAACAAGCTACCATT 230369 |||| | || | | |||| | || ||| || | | ||||||||| | || Sbjct 238683 GGGTATGCACACAGACTTCGCCTGTCTCCTGTTCTCGCACTTGAAGAACAAGCCAG-ATC 238741 Query 230370 CGAGACG-GTCAAACAAATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTG 230428 | || || | ||||| || ||||||| | || |||||||| | | Sbjct 238742 AGGCACTTGTGCAGAGCATCATCGTTGAGGCAGTTGCTATTGAGCAGGAGTTCCTCACAG 238801 Query 230429 ACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAAT 230488 | ||| | ||||| ||| | ||||||||||||| || ||| ||| |||||||| | Sbjct 238802 ATGCTCTGCCATGCAAGCTTCTCGGCATGAACGCTGGTCTCATGTCACAATACATCGAGT 238861 Query 230489 TCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACC 230548 |||| ||||||||| | || | ||||| || || |||| | |||||| | | |||| Sbjct 238862 TCGTGGCCGACCGCCTGCTTTTGGCACTCGGCAACAAGAAGTTCTACAACGCCACCAACC 238921 Query 230549 CCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTG 230608 | || | || |||||| ||| || || || ||||||||||||||||| ||||||| Sbjct 238922 CATTCGACTTCATGGAGAACATCTCACTGGGCGGCAAGACCAACTTCTTCGAGAAGCGTG 238981 Query 230609 TCAGTGACTATCAGAGGCCTGGTGTGATG 230637 | | || || || | | | ||||| ||| Sbjct 238982 TTGGCGAGTACCAAAAGGCGGGTGTCATG 239010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057817345295330