Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09-
23] 491 sequences; 33,245,410 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq31 156 9e-33
>seq31
Length=267444
Score = 156 bits (172), Expect = 9e-33
Identities = 563/869 (65%), Gaps = 19/869 (2%)
Strand=Plus/Plus
Query 229780 ATGTGGGATATGTACAAGAAGGCGGTGGCAACTTTCTGGACCACTGAGGAAGTTCCTCTG 229839
|| ||| | |||||||||||||| | |||| | ||||||||| | ||||| || ||||
Sbjct 238150 ATCTGGCAGATGTACAAGAAGGCCGAGGCATCGTTCTGGACCGCAGAGGAGATTGATCTG 238209
Query 229840 AACGCAGACGTCGTCGACTGGCGTGAGAAACTCAATGACGACGAACGTCATTTCATCAAA 229899
| || | ||| ||| || ||||||||| ||||| || |||||| |
Sbjct 238210 TCCAAGGATCTGCACGATTGGAACAAGCGACTCAATGATGACGAGCGATTCTTCATCTCA 238269
Query 229900 CACATCCTAGGTTTTTTCGCAGGCTCCGATGGTATTGTGATGGAAAATCT-GCAGACCAA 229958
||| | || | ||| ||||||| || || || ||||| | || || || | || |
Sbjct 238270 CACGTTCTCGCTTTCTTCGCAGCATCAGACGGCATTGTCAACGAGAACCTTGTCGAGCG- 238328
Query 229959 CTTTAGTGTGGAAGTAACGGTTCCAGAGGCACGGCAATTTTATGCTTACCAAACATTCAA 230018
||| || || || | | ||||||||||| || |||| || ||| | | |
Sbjct 238329 CTTCAGCTCTGAGGTTCAGATCCCAGAGGCACGATGCTTCTATGGTTTCCAGATCATGAT 238388
Query 230019 CGAATCTATCCATTCTGAACAATATGCTCTGCTTATCGACGCGCTTATTTCCGACGAGC- 230077
|| ||||| || ||| ||| | || ||||| ||| | ||| || | |||||
Sbjct 238389 GGAGAACATCCACTCCGAAACATACTCCCTCCTTATTGACACA--TATATCAG-CGAGCC 238445
Query 230078 -AAGAACGGAACG-AGCTTTTTGATGCCATTGAAAACATCCCGGCGGTTCATAACAAGGC 230135
||| | |||| | || || | ||||| || ||||||||| | | ||| |||||
Sbjct 238446 AAAGCAGCGAACATATCTGTTCAACGCCATCGATAACATCCCGTGCATCCGTAAGAAGGC 238505
Query 230136 AAAGTGGGCTCAGAAATGG--CTAGAACCTGGTAAAT----CGTTTGCCGAGCGTCTCGT 230189
| ||||| | |||| || | || |||| | || ||| || | ||
Sbjct 238506 TGACTGGGCGTTGCGATGGATCTCGGACAA---AAATTCCACATTCGCCCTCCGATTGGT 238562
Query 230190 CGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCGCCATCTTTTGGCT 230249
|| | | |||||| ||||| | |||||||| ||| ||||||||| |||||
Sbjct 238563 TGCTTTCGCCGCTGTTGAGGGTATCTTCTTTTCCGGTTCCTTCGCCGCCATCTTCTGGCT 238622
Query 230250 GCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCATCAGTCGCGACGA 230309
| ||| ||| | ||| ||||||| | || |||||| | ||| || || ||
Sbjct 238623 GAAGAAGCGTGGTCTCATGGCTGGCCTTACATTCTCGAACGAGCTTATCTCCCGTGATGA 238682
Query 230310 GGGTCTCCATCAACAGTTCGGCGAGCTTATGTATTCAAAGCTCCAGAACAAGCTACCATT 230369
|||| | || | | |||| | || ||| || | | ||||||||| | ||
Sbjct 238683 GGGTATGCACACAGACTTCGCCTGTCTCCTGTTCTCGCACTTGAAGAACAAGCCAG-ATC 238741
Query 230370 CGAGACG-GTCAAACAAATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTG 230428
| || || | ||||| || ||||||| | || |||||||| | |
Sbjct 238742 AGGCACTTGTGCAGAGCATCATCGTTGAGGCAGTTGCTATTGAGCAGGAGTTCCTCACAG 238801
Query 230429 ACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAAT 230488
| ||| | ||||| ||| | ||||||||||||| || ||| ||| |||||||| |
Sbjct 238802 ATGCTCTGCCATGCAAGCTTCTCGGCATGAACGCTGGTCTCATGTCACAATACATCGAGT 238861
Query 230489 TCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACC 230548
|||| ||||||||| | || | ||||| || || |||| | |||||| | | ||||
Sbjct 238862 TCGTGGCCGACCGCCTGCTTTTGGCACTCGGCAACAAGAAGTTCTACAACGCCACCAACC 238921
Query 230549 CCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTG 230608
| || | || |||||| ||| || || || ||||||||||||||||| |||||||
Sbjct 238922 CATTCGACTTCATGGAGAACATCTCACTGGGCGGCAAGACCAACTTCTTCGAGAAGCGTG 238981
Query 230609 TCAGTGACTATCAGAGGCCTGGTGTGATG 230637
| | || || || | | | ||||| |||
Sbjct 238982 TTGGCGAGTACCAAAAGGCGGGTGTCATG 239010
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057817345295330
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |