Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09- 23] 491 sequences; 33,245,410 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq31 131 2e-25 >seq31 Length=267444 Score = 131 bits (144), Expect = 2e-25 Identities = 472/725 (65%), Gaps = 14/725 (2%) Strand=Plus/Minus Query 16674 TTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCT 16733 ||||||| |||| ||| || || ||||| ||||| || ||||| | || || || |||| Sbjct 238996 TTTGGTACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGTGAGATGTTCT 238937 Query 16734 CCATGAAATCAAAAGGATTAGTAGC--TGAAAATATTTTAGAGTACCCCAGTTCGGCGAT 16791 ||||||| || || || || || || || | | || | | | || ||| | | Sbjct 238936 CCATGAAGTCGAATGGGTTGGTGGCGTTGTAGAACTTCTTG--TTGCCGAGTGCCAAAAG 238879 Query 16792 TAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAG 16851 | | || || || || || || ||||| |||| | | |||||| || | ||| Sbjct 238878 CAGGCGGTCGGCCACGAACTCGATGTATTGTGACATGAGACCAGCGTTCATGCCGAGAAG 238819 Query 16852 ACGTACC-GGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAA 16910 | | | || ||||| || || | || ||||| ||| |||| || || || | Sbjct 238818 -CTTGCATGGCAGAGCATCTGTGAGGAACTCCTGCTCAATAGCAACTGCCTCAACGATGA 238760 Query 16911 TACTAGCAACTCGTTCCTCGGACGG--TGTATGTTTAAGATGTTTAAACATCAGACATGC 16968 | || || || ||| || ||| | || ||| || |||| ||||| || Sbjct 238759 TGCTCTGCACAAGTGCCTGATCTGGCTTGT-TCTTCAAG-TGCGAGAACAGGAGACAGGC 238702 Query 16969 GAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGG 17028 ||| || || | ||||| || | | |||||| ||||| || ||||| | || | Sbjct 238701 GAAGTCTGTGTGCATACCCTCATCACGGGAGATAAGCTCGTTCGAGAATGTAAGGCCAGC 238642 Query 17029 CATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACC 17088 ||| || || ||||| | ||| || || |||||||| || || |||||||| ||||| Sbjct 238641 CATGAGACCACGCTTCTTCAGCCAGAAGATGGCGGCGAAGGAACCGGAAAAGAAGATACC 238582 Query 17089 CTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGA-ATCC 17147 ||| || | || || || | ||||| |||| | || | | ||||| ||| |||| Sbjct 238581 CTCAACAGCGGCGAAAGCAACCAATCGGAGGGCGAATGTGGAATTTTTGTC-CGAGATCC 238523 Query 17148 ATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATA 17207 || | | |||| || || || | ||||| || | || ||||| || || | Sbjct 238522 ATCGCAACGCCCAGTCAGCCTTCTTACGGATGCACGGGATGTTATCGATGGCGTTGAACA 238463 Query 17208 -ATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCG 17266 || | | | | || | | ||| | ||||| || || || || ||| ||| ||||| Sbjct 238462 GATATGT-TCGCTGCTTTGGCTCGCTGATATATGTGTCAATAAGGAGGGAGTATGTTTCG 238404 Query 17267 GAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGA 17326 ||||| ||||||||||| ||||| || || || |||||||| || || | || ||| Sbjct 238403 GAGTGGATGTTCTCCATCATGATCTGGAAACCATAGAAGCATCGTGCCTCTGGGATCTGA 238344 Query 17327 ACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAA 17386 || || | ||| || || | || || ||||| || |||||||| || ||||| Sbjct 238343 ACCTCAGAGCTGAAGCGCTCGACAAGGTTCTCGTTGACAATGCCGTCTGATGCTGCGAAG 238284 Query 17387 AACGC 17391 || || Sbjct 238283 AAAGC 238279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517542423563880