Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09-
23] 491 sequences; 33,245,410 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq25 136 3e-27
seq64 98.7 9e-16
>seq25
Length=313491
Score = 136 bits (150), Expect = 3e-27
Identities = 161/216 (75%), Gaps = 4/216 (2%)
Strand=Plus/Plus
Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTG--CGCGTA 118583
|||||||||||| | |||||||| || || |||||||| | || | |||| || |
Sbjct 101250 CAACACCAAGTGCAGGGTAGACTCCTTCTGGATGTTGTAGT--CTGAAAGTGTCCGGCCA 101307
Query 118584 TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTG 118643
||||||||||| || |||||| |||||||||||||||| || || || |||||||||||
Sbjct 101308 TCCTCGAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTA 101367
Query 118644 TCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACC 118703
||| ||| || ||||| | |||| ||||| | || ||||||| || |
Sbjct 101368 TCTTGAATCTTCGACTTAACGTTGTCGATAGTGTCTGAAGATTCCACCTCGAGTGTAATT 101427
Query 118704 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
|| |||||||| || || || ||||| || ||||||
Sbjct 101428 GTCTTGCCGGTAAGTGTCTTCACAAATATTTGCATG 101463
Score = 118 bits (130), Expect = 9e-22
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||| | ||| | || || || || || |||||||| ||||| | ||||| ||||||
Sbjct 101481 CACAAGGTGTAGCGTGGATTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCATCCTC 101540
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
||||| || || ||| |||| || |||||||| ||||| || ||||||||||||||
Sbjct 101541 AAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGTGGGATGCCCTCCTTGTCCTG 101600
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
||| || || || | || | ||||||| ||| ||||||| ||| | || ||
Sbjct 101601 AATCTTCGACTTGACGTTGTCAATCGTGTCCGACGACTCAACCTCGAGGGTGATGGTCTT 101660
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||||||| || || || || ||||||||
Sbjct 101661 GCCGGTCAAGGTCTTGACGAAGATCTGCAT 101690
Score = 95.1 bits (104), Expect = 1e-14
Identities = 125/171 (73%), Gaps = 2/171 (1%)
Strand=Plus/Plus
Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606
||| || ||||||||||| ||||| | ||||| |||||||||||| || || ||| |
Sbjct 101727 CTCCTTCTGAATGTTGTAGTCGCTGAGGGTGCGACCATCCTCGAGCTGCTTGCCTGCGAA 101786
Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT-CTGTAATTTTTTGTTTAACCT 118665
||| | |||||||| || ||||| || |||||||||| ||| | || | ||| || |
Sbjct 101787 GATCAAGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCCTGGATCTTGCTCTTT-ACAT 101845
Query 118666 GTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCA 118716
|| | ||||| | ||| ||||||| ||| | || ||||| ||||
Sbjct 101846 TGTCAATCGTGTCAGAAGACTCCACCTCGAGGGTGATTGTCTTGCCAGTCA 101896
>seq64
Length=168546
Score = 98.7 bits (108), Expect = 9e-16
Identities = 129/179 (72%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610
|| ||||||||||| || || |||||| ||| || ||||| ||||| ||| ||||
Sbjct 20794 TTCTGAATGTTGTAGTCCGACAGAGTGCGGCCATCTTCAAGCTGCTTTCCGGCGAAGATC 20735
Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCG 118670
| ||||||||| || || || ||||||||||||||| || || || || | |||
Sbjct 20734 AAACGCTGCTGGTCCGGTGGAATGCCCTCCTTGTCTTGGATCTTGCTCTTGACATTGTCG 20675
Query 118671 ACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 118729
| |||||| | |||||| |||| || | || ||||| || || || ||||| ||
Sbjct 20674 ATGGTGTCGCTAGACTCGACTTCGAGCGTGATGGTCTTGCCAGTGAGGGTCTTTACGAA 20616
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433827803931772
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |