Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09- 23] 491 sequences; 33,245,410 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq8 470 1e-127 seq31 163 3e-35 seq25 107 2e-18 >seq8 Length=557162 Score = 470 bits (520), Expect = 1e-127 Identities = 1234/1858 (66%), Gaps = 52/1858 (3%) Strand=Plus/Plus Query 22145 GTGCGAAGATAATACATGCCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGAC 22204 || ||||| || |||||||| ||||| ||||| | |||||| | ||||| || | Sbjct 458888 GTACGAAGGTAGTACATGCCAGTCTTGAGACCAAGCTTCCAACCAGCGAAATGCATGCTC 458947 Query 22205 GTCAATTTTCCATAACTCGGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGATA 22264 || | || || | ||| | ||||| | ||| || |||| ||||||||| Sbjct 458948 GTGATCTTGCCCATGGTTGGCTCCTTCATGTGGATATTCAAGCTCTGAGACTGATCGATG 459007 Query 22265 AACGCTCCTCGATCGGCGGCCATATTTATCAATGT-ACGCATCGACATTTCCCATACGGT 22323 || || || || || || ||||| | | | |||| |||| || ||||| ||||| Sbjct 459008 AAGGCACCACGGTCAGCAGCCATCTGGA-CGATGTTACGCTGGCTGATCTCCCAGACGGT 459066 Query 22324 CTTGTACAGTTGCCTGATCTCTAACGGTATCGATTCGA-TCCTCTGGACGGACCCGTTAT 22382 |||||| ||| | ||| || || || | | || | | ||||| ||| ||||||| Sbjct 459067 CTTGTAAAGTGCCTTGAGGTCATCTGGGAT-GTTGGGAATGCGCTGGATGGAACCGTTAT 459125 Query 22383 TGTGTATGATCAAATTTTTAATCGTATCGTTCCACAAACCGATGGCGGTCAA-ATCTTTG 22441 | ||||| || || || | || ||||| ||| | || | ||| ||| || Sbjct 459126 CGGCAATGATGCGGTTCTTCATGTTCTCAGACCACAGACC-ACGGTCGACAAGATCCTTC 459184 Query 22442 ACCAG--ATGACGGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGT 22499 | ||| ||| |||| || || || |||||||||| |||||| || || ||| |||| Sbjct 459185 AGCAGCCATG--GGTTGACGACCTGGAACTCGCCGGCCAAGACACGACGGGAGTAGATGT 459242 Query 22500 TGGATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCG 22559 || ||| | || ||||| | |||||| |||| ||||| | |||||| ||||| | Sbjct 459243 TGCTCGTGTATGGCTCGAAGCACTCATTGAAGCCCATGATCTGTGAGGTCGATGCGGTAG 459302 Query 22560 GCATCGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCA 22619 |||| || || | || |||||||| | || || |||| | || || ||||||| Sbjct 459303 GCATAGGTGCAACAAGCAGCGAGTTGCGCACACCATGCTGAGCGATCTTGGCCTTGAGCT 459362 Query 22620 TCGACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGC 22679 | |||||||||||| || | || ||| ||| ||||||| ||||| || | | ||| Sbjct 459363 CGGCCCAGTCCCACAGGTCTGTAGGAGTC---TTGCCCCACATGTCGTACTGAAGCTCGC 459419 Query 22680 C--GCGACTCGCCGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTC 22737 | |||| | || ||| | ||| || ||||| |||||| || ||||||| || Sbjct 459420 CTTGCGATACT--GGAGAGCCCTGGTAAGTCTCGTATGGACCAAGCTTCTCGGCAAGCTC 459477 Query 22738 GCAGCTCGCCTCCAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGC 22797 ||| ||||| | ||| | | || || ||||||||||| | |||| | || Sbjct 459478 GCACGAAGCCTCAAGAGCGGCATGGTAGATGGTCTCGAAGATATGGATGTTGAGCTCCTT 459537 Query 22798 GGC----GGCGACGCTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCT 22853 ||| ||||| ||| | |||||||| | || ||| || || || | ||| | Sbjct 459538 GGCCTCGGGCGAG----TCGAATGGCATACGGAGGGCCAAGAAAGCATCAGCAAGACCGT 459593 Query 22854 GAACGCCTATACCGATCGGTCGGTTTTTCAGATTCGACACTTT--TGCCTCGGGCAAAGG 22911 || || | ||| || ||||||| | || | ||| |||||| || | || Sbjct 459594 TGACACCCAGACCAATAGGTCGGTGACGGAAGTTG--CTCTTCCGTGCCTCTGGTACTGG 459651 Query 22912 ATACCAATTCGAATCGATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNN 22971 || | || ||||| || |||||||||| | || |||| || || | Sbjct 459652 GTAATAGTTGATCTCGATGGTCTTGTTCAAGTTGCGAGTGACAACCTTGGTGACCTCGTG 459711 Query 22972 NNNNNNNTCAAAGTCGTAAACGCC-----CGATTGTACAACAAACTTGTTGACGGCG--A 23024 | |||||| |||| | |||| || |||| | ||| | | | | | Sbjct 459712 AAGCTTCTTGAAGTCGAAAACCTCGTTTTCGAT-GT-CAACGTA--TGTCGGCAGAGCAA 459767 Query 23025 TCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTAC 23084 |||||| | ||||| || || ||||| ||| | | |||||| | ||||| || | Sbjct 459768 GCGAGGCCAAGTTGCAGACAGCGACCTCATCTGGTGCAGAGTACTCCATGATTTCAGTGC 459827 Query 23085 ATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAAT 23144 | | || || || || ||||| | || |||||||||| || || ||| | || Sbjct 459828 ACAAGTTCGAACTTTTGATGGTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTGGCGGCAT 459887 Query 23145 CCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACA 23204 ||||||| || ||| | || ||||| |||||| ||| | || | || || ||| | Sbjct 459888 CCTTGTACAGGATGAAAGGTGTGCCAGTCTCGGTCTGGGCTTCAAGAATTGCATACCAGA 459947 Query 23205 TAGTCTGAGCGTGAACACGTCGCACGTACCTG-CCTTCTTCCTCGTACTTTTGGTACAAC 23263 | |||| ||| |||| ||| |||| ||| |||||| ||| || | ||| | | Sbjct 459948 TCTTCTGGGCGCGAACG-GTCTCACGACCCTTACCTTCTCTCTCATATCGCTCGTAGAGC 460006 Query 23264 GCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGA 23323 | | || || ||||||| ||| | || ||| || | | | || ||||| || Sbjct 460007 TCCTTGAACTCATCACCGTAGACGTCAGACAAGCCAGGGCACTCATTGGGGCACATCAGG 460066 Query 23324 CTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAG 23383 |||| | || | || ||||| ||| || ||||| || ||||| || |||||| Sbjct 460067 GTCCAAGTGCCGTTCTGCTCGACGCGCTCCATGAAGAGATCTGGGATCCAAAGGGCGTAG 460126 Query 23384 AACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCC 23443 || || ||||| || || || ||||| |||||| |||||| | |||| || | Sbjct 460127 AAGAGATCGCGAGCACGGACTTCCTCCTTGCCGTGGTTCTTACGGAGGTCCATGAACTGA 460186 Query 23444 AACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCG 23503 || || || || ||||| ||||| ||||| | |||||| || || || | ||| ||||| Sbjct 460187 AAGACATCGGCGTGCCATGGCTCAAGGTAGATGGCAAAGGCACCTGGGCGCTTGTTGCCA 460246 Query 23504 CCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTG 23563 ||||| |||||||| || || ||||||||||||||||| | |||||| || ||||||||| Sbjct 460247 CCCTGGTCGACGTAGCGAGCAGTGTTGTTGTACACTCTCAACATCGGTACAAGACCGTTG 460306 Query 23564 GACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAA 23623 || | |||| ||| | | | ||||| | || || | |||||||| || | | Sbjct 460307 GATGTGCCGTTGGTGCCACCGATATAGGAACCAGTAGCACGGATATTGTGAACATGCAGA 460366 Query 23624 CCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCC 23683 || || || || | || || ||||| || ||| || || |||||||||||||| Sbjct 460367 CCAATACCGCCAGCGTTCTTGGAGATCATAGCACATGTCTTGAGGGTGTCGTAGATGCCG 460426 Query 23684 TCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTA 23743 ||||||||||| || || | || | |||||| || |||| || || |||| || || Sbjct 460427 TCGATGCTGTCATCCTTCATGGCAATCAAGAAGCAGGAAGCCAACTGGGCTTGCGGTGTT 460486 Query 23744 GCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTA-TCCATTCGACAT-TAGATTGT 23801 | || ||| || || || || || || ||||| | || |||||| ||| |||| Sbjct 460487 CCAGCGCTGAAAAGCGTTGGCGACGCATGTGTGAAGTACTTCA-GCGACATGTAG-TTGT 460544 Query 23802 ACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCA 23861 | || || || || || ||||| || |||||||| ||||||| || || ||||| |||| Sbjct 460545 ATGTCTCAATCGCAGCCTCAATATCTTCTCCGTGGATACCGACCGCCACACGCATGATCA 460604 Query 23862 TGTATTGAGGTCTCT---CGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCA 23918 | | || ||||||| ||||| | ||||| ||| ||| || ||||| || | || Sbjct 460605 TCTGCTGCGGTCTCTCAGCGACCTT---GCCGTCGATTCTGAGAAGGTATGATCGCTCCA 460661 Query 23919 TCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATT 23976 || || || || || || | ||||| ||||| || |||| || |||||||| || Sbjct 460662 GAGTCTTGAAGCCGAAGTACTGGTAGTTGAAGTCGCGGTCGTAGACAATGGCCGAGTT 460719 >seq31 Length=267444 Score = 163 bits (180), Expect = 3e-35 Identities = 564/862 (65%), Gaps = 31/862 (4%) Strand=Plus/Plus Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 || ||| | |||||||| ||||| || |||||||| ||||||| || || | || ||| Sbjct 238150 ATCTGGCAGATGTACAAGAAGGCCGAGGCATCGTTCTGGACCGCAGAGGAGATTGATCTG 238209 Query 57630 TCTAAGGATCTGAGCGATTGGGATTCCC---TCAAAGAATCTGAGAGAAATTTTATTAAA 57686 || ||||||||| ||||||| | | |||| || ||| || || || | Sbjct 238210 TCCAAGGATCTGCACGATTGGAACAAGCGACTCAATGATGACGAGCGATTCTTCATCTCA 238269 Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746 ||||| | || || ||||| ||||| || || ||||| |||||||| | ||||| | Sbjct 238270 CACGTTCTCGCTTTCTTCGCAGCATCAGACGGCATTGTCAACGAGAACCTTGTCGAGCGC 238329 Query 57747 TTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATT 57806 || || || || | | ||||| ||||||| || || || || | || Sbjct 238330 TTCAGCTCTGAGGTTCAGATCCCAGAGGCACGATGCTTCTATGGTTTCCAGATCATGATG 238389 Query 57807 GAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGA--CAACG 57864 || ||| | || || |||| || || || || || || || || | | || ||| | Sbjct 238390 GAGAACATCCACTCCGAAACATACTCCCTCCTTATTGACACATATATCAGCGAGCCAAAG 238449 Query 57865 ACGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCG-ATCGCCAAGAAGGCA 57923 | ||| | || ||||||||||| ||||| | || |||| | ||| |||||||| Sbjct 238450 CAGCGAA-CATAT-CTGTTCAACGCCATCGATAACAT-CCCGTGCATCCGTAAGAAGGCT 238506 Query 57924 GAGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCG 57983 || ||| | | |||||| | | |||| |||||| | | | || Sbjct 238507 GACTGGGCGTTGCGATGGATCTCGGACAAAAATTCCACATTCGCCCTCCGATTGGTTGCT 238566 Query 57984 TTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAG 58043 |||||||| || || ||||| |||||||| || ||| || || || || ||| ||||| Sbjct 238567 TTCGCCGCTGTTGAGGGTATCTTCTTTTCCGGTTCCTTCGCCGCCATCTTCTGGCTGAAG 238626 Query 58044 AAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGT 58103 || || || || ||| | ||||| || || |||||| | || || || || |||||| Sbjct 238627 AAGCGTGGTCTCATGGCTGGCCTTACATTCTCGAACGAGCTTATCTCCCGTGATGAGGGT 238686 Query 58104 CTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGCGGGAT 58163 | || || || || || || || ||| ||| ||| ||| || || | || ||| Sbjct 238687 ATGCACACAGACTTCGCCTGTCTCCTGTTCTCGCAC-TTG--AAGAA---CAAGCCAGAT 238740 Query 58164 C--GCATCTTG----GA-CATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCAC 58216 | ||| |||| || ||| ||| ||||| || || || || | ||||| |||| Sbjct 238741 CAGGCA-CTTGTGCAGAGCATCATCGTTGAGGCAGTTGCTATTGAGCAGGAGTTCCTCAC 238799 Query 58217 CGAAGCCCTACC--GGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATT 58274 || || || || | || | ||||| |||||| || | | |||||| | ||||| Sbjct 238800 AGATGCTCTGCCATGCAAGC--TTCTCGGCATGAACGCTGGTCTCATGTCACAATACATC 238857 Query 58275 GAGTTTGTTGCCGACAGACTTTTGCTCGAACT--GATTGGAGAGCGTCATTACAACACGA 58332 ||||| || |||||| | || | | | ||| | ||| || |||||| | | Sbjct 238858 GAGTTCGTGGCCGACCGCCTGCTTTTGGCACTCGGCAACAAGAAGTTC--TACAACGCCA 238915 Query 58333 AAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGaaa 58392 || || || || || ||| | ||||| || | |||||||| ||||| ||||| | Sbjct 238916 CCAACCCATTCGACTTCATGGAGAACATCTCACTGGGCGGCAAGACCAACTTCTTCGAGA 238975 Query 58393 aaaaaGTTAGCGAATATCAAAA 58414 | ||| |||| || ||||| Sbjct 238976 AGCGTGTTGGCGAGTACCAAAA 238997 >seq25 Length=313491 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| |||| ||||| || |||||| |||| ||||| |||| Sbjct 101690 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTTGAGTCGTCG 101631 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | ||||| || || ||||||||| ||| | || ||||||||| Sbjct 101630 GACACGATTGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGCATCCCACCCGACCAG 101571 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || ||||| ||||| ||| | || || || | ||||| || ||| Sbjct 101570 CAGCGCCTGATCTTCGCCGGCAAGCAGCTTGAGGATGGCCGCACCCTCAGCGACTACAAC 101511 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || || ||||| || || || || || || Sbjct 101510 ATCCAGAAGGAATCCACGCTACACCTTGTGCT 101479 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| || || ||||| || || ||||| || || || |||| || ||| | || Sbjct 101463 CATGCAAATATTTGTGAAGACACTTACCGGCAAGACAATTACACTCGAGGTGGAATCTTC 101404 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | |||| | || || || || || ||||| ||| | || || ||||| Sbjct 101403 AGACACTATCGACAACGTTAAGTCGAAGATTCAAGATAAGGAGGGCATCCCACCTGACCA 101344 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 ||||||||| || |||||||| || ||| | || || Sbjct 101343 GCAGCGTCTCATCTTCGCTGGTAAGCAGCTCGAGGA 101308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445763664108720