Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09-
23] 491 sequences; 33,245,410 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq8 89.7 1e-12
seq92 86.0 1e-11
>seq8
Length=557162
Score = 89.7 bits (98), Expect = 1e-12
Identities = 103/136 (76%), Gaps = 2/136 (1%)
Strand=Plus/Plus
Query 94392 ACCTTTGCCTTCAGCCTCATATTTCTCGTACAACGCCTTAAACTCTTCGCCATGGACGTC 94451
||| || ||||| ||||||| |||||| | | |||| ||||| || || | ||||||
Sbjct 459973 ACCCTTACCTTCTCTCTCATATCGCTCGTAGAGCTCCTTGAACTCATCACCGTAGACGTC 460032
Query 94452 GGAAAGGCCAGGGCACTCGTGGGGGCACATCAGGGACCAA-TTCTTCCCAGCCTTCACTC 94510
|| | |||||||||||| | |||||||||||||| |||| | | | | || || |
Sbjct 460033 AGACAAGCCAGGGCACTCATTGGGGCACATCAGGGTCCAAGTGCCGTTCTG-CTCGACGC 460091
Query 94511 TCTCCATGAAGAGATC 94526
|||||||||||||||
Sbjct 460092 GCTCCATGAAGAGATC 460107
>seq92
Length=106135
Score = 86.0 bits (94), Expect = 1e-11
Identities = 203/306 (66%), Gaps = 2/306 (1%)
Strand=Plus/Minus
Query 35316 CCAAGA--AGAAGATACACATCTGGAACGCTAATGGGTCGCGGGAATTTTTGGACAGTAG 35373
|||||| |||| ||||||| ||| ||| || || ||||| |||| | |||
Sbjct 83433 CCAAGATCAGAACGTACACATATGGGACGGCAACGGCTCGCGAGAATACCTCGACTCCGT 83374
Query 35374 AGGGTTATACGATAGAGCAGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCA 35433
||| || | | |||| | |||||| |||||||| || ||||| || |||||||||||
Sbjct 83373 AGGACTAGGCTACAGAGAAACGGGAGACTTGGGACCAGTCTACGGCTTTCAATGGCGTCA 83314
Query 35434 TTTTGGTGCTGAATATGATACCTGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATT 35493
||| || || ||||| | |||| | ||| || || || | || |||| ||| |
Sbjct 83313 TTTCGGAGCGGAATACAAGACCTCTCACGACGACTACACAGGTCAAGGAGTTGACCAACT 83254
Query 35494 GGCCAATATACTAAAGACCCTGAGAGAAAATCCAGATGATAGAAGGATGATTATGACGGC 35553
||| | | | | | |||| | |||||| | ||| | |||| || | | ||
Sbjct 83253 AGCCGAAGTCATCCACAAACTGAAGCATAATCCATACGATCGGCGGATTATCCTTTCAGC 83194
Query 35554 ATGGAATCCTATGGATCTTCACCTTATGGCTCTTCCTCCATGCCACATGACTGCTCAATT 35613
||||||||| || || | ||||| || || || ||||||||| || |||||
Sbjct 83193 ATGGAATCCCGCAGACCTCAAAAAGATGGCCCTCCCGCCCTGCCACATGTTCGCGCAATT 83134
Query 35614 TTATGT 35619
|| ||
Sbjct 83133 CTACGT 83128
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989577774588905
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |