Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09- 23] 491 sequences; 33,245,410 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq8 89.7 1e-12 seq92 86.0 1e-11 >seq8 Length=557162 Score = 89.7 bits (98), Expect = 1e-12 Identities = 103/136 (76%), Gaps = 2/136 (1%) Strand=Plus/Plus Query 94392 ACCTTTGCCTTCAGCCTCATATTTCTCGTACAACGCCTTAAACTCTTCGCCATGGACGTC 94451 ||| || ||||| ||||||| |||||| | | |||| ||||| || || | |||||| Sbjct 459973 ACCCTTACCTTCTCTCTCATATCGCTCGTAGAGCTCCTTGAACTCATCACCGTAGACGTC 460032 Query 94452 GGAAAGGCCAGGGCACTCGTGGGGGCACATCAGGGACCAA-TTCTTCCCAGCCTTCACTC 94510 || | |||||||||||| | |||||||||||||| |||| | | | | || || | Sbjct 460033 AGACAAGCCAGGGCACTCATTGGGGCACATCAGGGTCCAAGTGCCGTTCTG-CTCGACGC 460091 Query 94511 TCTCCATGAAGAGATC 94526 ||||||||||||||| Sbjct 460092 GCTCCATGAAGAGATC 460107 >seq92 Length=106135 Score = 86.0 bits (94), Expect = 1e-11 Identities = 203/306 (66%), Gaps = 2/306 (1%) Strand=Plus/Minus Query 35316 CCAAGA--AGAAGATACACATCTGGAACGCTAATGGGTCGCGGGAATTTTTGGACAGTAG 35373 |||||| |||| ||||||| ||| ||| || || ||||| |||| | ||| Sbjct 83433 CCAAGATCAGAACGTACACATATGGGACGGCAACGGCTCGCGAGAATACCTCGACTCCGT 83374 Query 35374 AGGGTTATACGATAGAGCAGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCA 35433 ||| || | | |||| | |||||| |||||||| || ||||| || ||||||||||| Sbjct 83373 AGGACTAGGCTACAGAGAAACGGGAGACTTGGGACCAGTCTACGGCTTTCAATGGCGTCA 83314 Query 35434 TTTTGGTGCTGAATATGATACCTGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATT 35493 ||| || || ||||| | |||| | ||| || || || | || |||| ||| | Sbjct 83313 TTTCGGAGCGGAATACAAGACCTCTCACGACGACTACACAGGTCAAGGAGTTGACCAACT 83254 Query 35494 GGCCAATATACTAAAGACCCTGAGAGAAAATCCAGATGATAGAAGGATGATTATGACGGC 35553 ||| | | | | | |||| | |||||| | ||| | |||| || | | || Sbjct 83253 AGCCGAAGTCATCCACAAACTGAAGCATAATCCATACGATCGGCGGATTATCCTTTCAGC 83194 Query 35554 ATGGAATCCTATGGATCTTCACCTTATGGCTCTTCCTCCATGCCACATGACTGCTCAATT 35613 ||||||||| || || | ||||| || || || ||||||||| || ||||| Sbjct 83193 ATGGAATCCCGCAGACCTCAAAAAGATGGCCCTCCCGCCCTGCCACATGTTCGCGCAATT 83134 Query 35614 TTATGT 35619 || || Sbjct 83133 CTACGT 83128 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989577774588905