Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09- 23] 491 sequences; 33,245,410 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq8 174 2e-38 >seq8 Length=557162 Score = 174 bits (192), Expect = 2e-38 Identities = 453/688 (66%), Gaps = 2/688 (0%) Strand=Plus/Plus Query 66008 CAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTT 66067 ||| ||||| || |||| || ||||||| | ||| |||| | || || || | Sbjct 460036 CAAGCCAGGGCACTCATTGGGGCACATCAGGGTCCAAGTGCCGTTCTGCTCGACGCGCTC 460095 Query 66068 CATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTT 66127 ||| |||||||| || |||||||| || || | ||| | | | |||||| || Sbjct 460096 CATGAAGAGATCTGGGATCCAAAGGGCGTAGAAGAGATCGCGAGCACGGACTTCCTCCTT 460155 Query 66128 TCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTA 66187 || ||||| || || | |||| | | ||| ||||| || || | ||| Sbjct 460156 GCCGTGGTTCTTACGGAGGTCCATGAACTGAAAGACATCGGCGTGCCATGGCTCAAGGTA 460215 Query 66188 TATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATT 66247 ||||| | | || || || ||||| || ||||| || | ||| | ||| ||||| || Sbjct 460216 GATGGCAAAGGCACCTGGGCGCTTGTTGCCACCCTGGTCGACGTAGCGAGCAGTGTTGTT 460275 Query 66248 ATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCT 66307 || ||||||||||| || | || ||| |||||||| || ||||| || ||||||| Sbjct 460276 GTACACTCTCAACATCGGTACAAGACCGTTGGATGTGCCGTTGGTGCCACCGATATAGGA 460335 Query 66308 TCCACTTGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAA 66367 ||| | ||||| ||||| || ||||| || || || || | || ||||| | Sbjct 460336 ACCAGTAGCACGGATATTGTGAACATGCAGACCAATACCGCCAGCGTTCTTGGAGATCAT 460395 Query 66368 TGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAG 66427 || ||| || | || || |||||||| || || || |||||| ||||| || | Sbjct 460396 AGCACATGTCTTGAGGGTGTCGTAGATGCCGTCGATGCTGTCATCCTTCATGGCAATCAA 460455 Query 66428 AAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTG 66487 || ||| || || ||| | ||||| || | || | || || || || || Sbjct 460456 GAAGCAGGAAGCCAACTGGGCTTGCGGTGTTCCAGCGCTGAAAAGCGTTGGCGACGCATG 460515 Query 66488 CGTAAACCATTTTTCAGA-AAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATT 66546 || || | || || | |||| ||||| |||||||| || | || ||||| | Sbjct 460516 TGTGAAGTACTTCAGCGACATGTAG-TTGTATGTCTCAATCGCAGCCTCAATATCTTCTC 460574 Query 66547 GATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGT 66606 || || || || || |||||||| | ||| ||||| ||||| ||| ||| |||| || Sbjct 460575 CGTGGATACCGACCGCCACACGCATGATCATCTGCTGCGGTCTCTCAGCGACCTTGCCGT 460634 Query 66607 TTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGT 66666 ||| | | | ||| ||| |||| ||| || || || || || | ||| |||| Sbjct 460635 CGATTCTGAGAAGGTATGATCGCTCCAGAGTCTTGAAGCCGAAGTACTGGTAGTTGAAGT 460694 Query 66667 CTCGTTCGTAAATAATAACCGAGTTGAG 66694 | || ||||| | ||| |||||||||| Sbjct 460695 CGCGGTCGTAGACAATGGCCGAGTTGAG 460722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658168760464440