Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09- 23] 491 sequences; 33,245,410 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq31 91.5 1e-13 >seq31 Length=267444 Score = 91.5 bits (100), Expect = 1e-13 Identities = 254/385 (66%), Gaps = 10/385 (3%) Strand=Plus/Plus Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTG 22809 || || || |||||||| || || | ||||| || || || || ||||| ||||||||| Sbjct 238564 GCTTTCGCCGCTGTTGAGGGTATCTTCTTTTCCGGTTCCTTCGCCGCCATCTTCTGGCTG 238623 Query 22810 AAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGAA 22869 ||||| ||| |||||| | || | | || || |||||| | || |||||| || Sbjct 238624 AAGAAGCGTGGTCTCATGGCTGGCCTTACATTCTCGAACGAGCTTATCTCCCGTGATGAG 238683 Query 22870 GGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAACCGTGTCAG 22929 ||| | ||| ||||| || ||| | ||||| ||| || ||||| || |||| Sbjct 238684 GGTATGCACACAGACTTCGCCTGTCTCCTGTTCTCGCACTTGAAGAACAAGCCAGATCAG 238743 Query 22930 G-AC-GATGCACATCAAATCATATCTGATGCCGTTGACATTGAGACGGCTTTCTTCCAAG 22987 | || |||| | | ||||| ||| || |||| |||||| || ||| || || Sbjct 238744 GCACTTGTGCAGAGC--ATCATCGTTGAGGCAGTTGCTATTGAGCAGGAGTTCCTCACAG 238801 Query 22988 AGGCACTAAAGACACCC---CTACTTGGTATGAATAGTGACAGTATGAGACTGTACATAC 23044 | || || | || | || || || ||||| || ||| || ||||| Sbjct 238802 ATGCTCT---GCCATGCAAGCTTCTCGGCATGAACGCTGGTCTCATGTCACAATACATCG 238858 Query 23045 AGTTTGTTGCAGATCGCCTGCTCGATGCCCTGGGTTATGCAAAGATGTATAACGTTGCCA 23104 |||| || || || |||||||| || || || | ||| | || |||| ||| Sbjct 238859 AGTTCGTGGCCGACCGCCTGCTTTTGGCACTCGGCAACAAGAAGTTCTACAACGCCACCA 238918 Query 23105 ATCCATTTGATTTCATGGATAACAT 23129 | ||||| || |||||||| ||||| Sbjct 238919 ACCCATTCGACTTCATGGAGAACAT 238943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356231468275873