Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09- 23] 491 sequences; 33,245,410 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq25 95.1 1e-14 >seq25 Length=313491 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 139535 TGGCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCG 139594 ||||| || || | ||||| || ||||| | |||||||| || || ||||| || || Sbjct 101233 TGGCCACCACGCAGGCGCAACACCAAGTGCAGGGTAGACTCCTTCTGGATGTTGTAGTCT 101292 Query 139595 CTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 139654 | ||| | || |||||||| |||||||| |||| ||||| ||||| || || Sbjct 101293 GAAAGTGTCCGGCCATCCTCGAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGT 101352 Query 139655 GGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGT-TCCACTGTGTCGGTGGGCTC 139713 || ||||| || || || ||| | || | ||| | | || | ||||| | | || Sbjct 101353 GGGATGCCCTCCTTATCT-TGAATCTTCGACTTAACGTTGTCGATAGTGTCTGAAGATTC 101411 Query 139714 CACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||||| | || | ||||||||||| | || || || ||||||||||| Sbjct 101412 CACCTCGAGTGTAATTGTCTTGCCGGTAAGTGTCTTCACAAATATTTGCAT 101462 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/206 (70%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 139561 GTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTG 139620 ||| | ||| || || || || ||||| || ||||| | |||| || || ||||| Sbjct 101487 GTGTAGCGTGGATTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCATCCTCAAGCTG 101546 Query 139621 TTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTT 139680 || || || ||||||| || ||||| ||||| || ||||| || ||||| ||| | | Sbjct 101547 CTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGTGGGATGCCCTCCTTGTCC-TGAATCT 101605 Query 139681 TTGTTTTAGCTGTTCCACT-GTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGG 139739 | | || | | || | ||||| | | ||| ||||| | ||| | |||||||||| Sbjct 101606 TCGACTTGACGTTGTCAATCGTGTCCGACGACTCAACCTCGAGGGTGATGGTCTTGCCGG 101665 Query 139740 TCAACGTTTTTACGAATATTTGCATA 139765 |||| || || ||||| || |||||| Sbjct 101666 TCAAGGTCTTGACGAAGATCTGCATA 101691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496060955407200