Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09-
23] 491 sequences; 33,245,410 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq25 95.1 1e-14
>seq25
Length=313491
Score = 95.1 bits (104), Expect = 1e-14
Identities = 161/231 (70%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 139535 TGGCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCG 139594
||||| || || | ||||| || ||||| | |||||||| || || ||||| || ||
Sbjct 101233 TGGCCACCACGCAGGCGCAACACCAAGTGCAGGGTAGACTCCTTCTGGATGTTGTAGTCT 101292
Query 139595 CTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 139654
| ||| | || |||||||| |||||||| |||| ||||| ||||| || ||
Sbjct 101293 GAAAGTGTCCGGCCATCCTCGAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGT 101352
Query 139655 GGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGT-TCCACTGTGTCGGTGGGCTC 139713
|| ||||| || || || ||| | || | ||| | | || | ||||| | | ||
Sbjct 101353 GGGATGCCCTCCTTATCT-TGAATCTTCGACTTAACGTTGTCGATAGTGTCTGAAGATTC 101411
Query 139714 CACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
|||||| | || | ||||||||||| | || || || |||||||||||
Sbjct 101412 CACCTCGAGTGTAATTGTCTTGCCGGTAAGTGTCTTCACAAATATTTGCAT 101462
Score = 89.7 bits (98), Expect = 5e-13
Identities = 145/206 (70%), Gaps = 2/206 (1%)
Strand=Plus/Plus
Query 139561 GTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTG 139620
||| | ||| || || || || ||||| || ||||| | |||| || || |||||
Sbjct 101487 GTGTAGCGTGGATTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCATCCTCAAGCTG 101546
Query 139621 TTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTT 139680
|| || || ||||||| || ||||| ||||| || ||||| || ||||| ||| | |
Sbjct 101547 CTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGTGGGATGCCCTCCTTGTCC-TGAATCT 101605
Query 139681 TTGTTTTAGCTGTTCCACT-GTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGG 139739
| | || | | || | ||||| | | ||| ||||| | ||| | ||||||||||
Sbjct 101606 TCGACTTGACGTTGTCAATCGTGTCCGACGACTCAACCTCGAGGGTGATGGTCTTGCCGG 101665
Query 139740 TCAACGTTTTTACGAATATTTGCATA 139765
|||| || || ||||| || ||||||
Sbjct 101666 TCAAGGTCTTGACGAAGATCTGCATA 101691
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496060955407200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |