Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09- 23] 491 sequences; 33,245,410 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq8 172 7e-38 >seq8 Length=557162 Score = 172 bits (190), Expect = 7e-38 Identities = 452/687 (66%), Gaps = 2/687 (0%) Strand=Plus/Plus Query 71971 AATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTC 72030 || ||||| || ||||| || ||||||| | ||| || | | | || || | | Sbjct 460037 AAGCCAGGGCACTCATTGGGGCACATCAGGGTCCAAGTGCCGTTCTGCTCGACGCGCTCC 460096 Query 72031 ATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTT 72090 || |||||||| || |||||||| || || ||||| | | | ||||| || Sbjct 460097 ATGAAGAGATCTGGGATCCAAAGGGCGTAGAAGAGATCGCGAGCACGGACTTCCTCCTTG 460156 Query 72091 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 72150 || ||||| || || | |||| | | ||| | ||||| || || | ||| Sbjct 460157 CCGTGGTTCTTACGGAGGTCCATGAACTGAAAGACATCGGCGTGCCATGGCTCAAGGTAG 460216 Query 72151 ATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 72210 ||||| | | || || || ||||| || ||||| || | ||| | ||| ||||| || Sbjct 460217 ATGGCAAAGGCACCTGGGCGCTTGTTGCCACCCTGGTCGACGTAGCGAGCAGTGTTGTTG 460276 Query 72211 TAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTT 72270 || ||||||||||| || | || ||| ||||||| || ||||| || ||||||| Sbjct 460277 TACACTCTCAACATCGGTACAAGACCGTTGGATGTGCCGTTGGTGCCACCGATATAGGAA 460336 Query 72271 CCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAAT 72330 ||| | ||||| |||||| || ||||| || || || || | || ||||| | Sbjct 460337 CCAGTAGCACGGATATTGTGAACATGCAGACCAATACCGCCAGCGTTCTTGGAGATCATA 460396 Query 72331 GCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGA 72390 || ||| || | || || |||||||| || || || |||||| ||||| || | Sbjct 460397 GCACATGTCTTGAGGGTGTCGTAGATGCCGTCGATGCTGTCATCCTTCATGGCAATCAAG 460456 Query 72391 AAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGC 72450 || ||| || || ||| | ||||| || | || | || || || || || Sbjct 460457 AAGCAGGAAGCCAACTGGGCTTGCGGTGTTCCAGCGCTGAAAAGCGTTGGCGACGCATGT 460516 Query 72451 GTAAACCATTTTTCAGACA-GTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTG 72509 || || | || |||| |||| ||||| |||||||| || | || ||||| | Sbjct 460517 GTGAAGTACTTCAGCGACATGTAG-TTGTATGTCTCAATCGCAGCCTCAATATCTTCTCC 460575 Query 72510 ATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATT 72569 || || || ||||| |||||||| | ||| ||||| ||||| ||| ||| |||| | Sbjct 460576 GTGGATACCGACCGCCACACGCATGATCATCTGCTGCGGTCTCTCAGCGACCTTGCCGTC 460635 Query 72570 TATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTC 72629 ||| | | | ||| ||| |||| ||| || || || || || | ||| ||||| Sbjct 460636 GATTCTGAGAAGGTATGATCGCTCCAGAGTCTTGAAGCCGAAGTACTGGTAGTTGAAGTC 460695 Query 72630 TCGTTCGTAAATAATAACCGAATTGAG 72656 || ||||| | ||| |||| ||||| Sbjct 460696 GCGGTCGTAGACAATGGCCGAGTTGAG 460722 Score = 93.3 bits (102), Expect = 6e-14 Identities = 303/470 (64%), Gaps = 3/470 (1%) Strand=Plus/Plus Query 70789 TCCTTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATG 70848 |||| ||| | || ||||| || || | || || |||| ||||| || ||||||||| Sbjct 458846 TCCTGGTCGACAGTGAACTGGATAGGTGCCGACGCAGCTTGTGTACGAAGGTAGTACATG 458905 Query 70849 CCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTA 70908 || || || ||||| || |||| || |||||||| ||||| | ||| | | Sbjct 458906 CCAGTCTTGAGACCAAGCTTCCAACCAGCGAAATGCATGCTCGTGATCTTGCCCATGGTT 458965 Query 70909 GGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 70968 || || ||||| ||||||| |||| |||||||||||||| || | ||| ||| Sbjct 458966 GGCTCCTTCATGTGGATATTCAAGCTCTGAGACTGATCGATGAAGGCACCACGGTCAGCA 459025 Query 70969 GCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATA 71028 ||||| | | ||| | || || ||||| | || || |||| | ||| | Sbjct 459026 GCCATCTGGACGATGTTACGCTGGCTGATCTCCCAGACGGTCTTGTAAAGTGCCTTGAGG 459085 Query 71029 TCTTCTGGAAGGTTTGTATT---CTGAATGGATCCACCATCTGCAATAATCCTATTTTTG 71085 || ||||| | ||| | | | ||| ||||| || ||| ||||| || | || || Sbjct 459086 TCATCTGGGATGTTGGGAATGCGCTGGATGGAACCGTTATCGGCAATGATGCGGTTCTTC 459145 Query 71086 ATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACT 71145 || | ||| ||| | | ||| | | | | || || || || || || Sbjct 459146 ATGTTCTCAGACCACAGACCACGGTCGACAAGATCCTTCAGCAGCCATGGGTTGACGACC 459205 Query 71146 TGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGAC 71205 || || || || | ||| || | ||| | ||| || || || || || || || | || Sbjct 459206 TGGAACTCGCCGGCCAAGACACGACGGGAGTAGATGTTGCTCGTGTATGGCTCGAAGCAC 459265 Query 71206 TCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCAC 71255 ||||| |||| || || | || ||||| || ||||||||||| || Sbjct 459266 TCATTGAAGCCCATGATCTGTGAGGTCGATGCGGTAGGCATAGGTGCAAC 459315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671135080883160