Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09-
23] 491 sequences; 33,245,410 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq8 172 7e-38
>seq8
Length=557162
Score = 172 bits (190), Expect = 7e-38
Identities = 452/687 (66%), Gaps = 2/687 (0%)
Strand=Plus/Plus
Query 71971 AATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTC 72030
|| ||||| || ||||| || ||||||| | ||| || | | | || || | |
Sbjct 460037 AAGCCAGGGCACTCATTGGGGCACATCAGGGTCCAAGTGCCGTTCTGCTCGACGCGCTCC 460096
Query 72031 ATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTT 72090
|| |||||||| || |||||||| || || ||||| | | | ||||| ||
Sbjct 460097 ATGAAGAGATCTGGGATCCAAAGGGCGTAGAAGAGATCGCGAGCACGGACTTCCTCCTTG 460156
Query 72091 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 72150
|| ||||| || || | |||| | | ||| | ||||| || || | |||
Sbjct 460157 CCGTGGTTCTTACGGAGGTCCATGAACTGAAAGACATCGGCGTGCCATGGCTCAAGGTAG 460216
Query 72151 ATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 72210
||||| | | || || || ||||| || ||||| || | ||| | ||| ||||| ||
Sbjct 460217 ATGGCAAAGGCACCTGGGCGCTTGTTGCCACCCTGGTCGACGTAGCGAGCAGTGTTGTTG 460276
Query 72211 TAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTT 72270
|| ||||||||||| || | || ||| ||||||| || ||||| || |||||||
Sbjct 460277 TACACTCTCAACATCGGTACAAGACCGTTGGATGTGCCGTTGGTGCCACCGATATAGGAA 460336
Query 72271 CCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAAT 72330
||| | ||||| |||||| || ||||| || || || || | || ||||| |
Sbjct 460337 CCAGTAGCACGGATATTGTGAACATGCAGACCAATACCGCCAGCGTTCTTGGAGATCATA 460396
Query 72331 GCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGA 72390
|| ||| || | || || |||||||| || || || |||||| ||||| || |
Sbjct 460397 GCACATGTCTTGAGGGTGTCGTAGATGCCGTCGATGCTGTCATCCTTCATGGCAATCAAG 460456
Query 72391 AAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGC 72450
|| ||| || || ||| | ||||| || | || | || || || || ||
Sbjct 460457 AAGCAGGAAGCCAACTGGGCTTGCGGTGTTCCAGCGCTGAAAAGCGTTGGCGACGCATGT 460516
Query 72451 GTAAACCATTTTTCAGACA-GTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTG 72509
|| || | || |||| |||| ||||| |||||||| || | || ||||| |
Sbjct 460517 GTGAAGTACTTCAGCGACATGTAG-TTGTATGTCTCAATCGCAGCCTCAATATCTTCTCC 460575
Query 72510 ATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATT 72569
|| || || ||||| |||||||| | ||| ||||| ||||| ||| ||| |||| |
Sbjct 460576 GTGGATACCGACCGCCACACGCATGATCATCTGCTGCGGTCTCTCAGCGACCTTGCCGTC 460635
Query 72570 TATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTC 72629
||| | | | ||| ||| |||| ||| || || || || || | ||| |||||
Sbjct 460636 GATTCTGAGAAGGTATGATCGCTCCAGAGTCTTGAAGCCGAAGTACTGGTAGTTGAAGTC 460695
Query 72630 TCGTTCGTAAATAATAACCGAATTGAG 72656
|| ||||| | ||| |||| |||||
Sbjct 460696 GCGGTCGTAGACAATGGCCGAGTTGAG 460722
Score = 93.3 bits (102), Expect = 6e-14
Identities = 303/470 (64%), Gaps = 3/470 (1%)
Strand=Plus/Plus
Query 70789 TCCTTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATG 70848
|||| ||| | || ||||| || || | || || |||| ||||| || |||||||||
Sbjct 458846 TCCTGGTCGACAGTGAACTGGATAGGTGCCGACGCAGCTTGTGTACGAAGGTAGTACATG 458905
Query 70849 CCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTA 70908
|| || || ||||| || |||| || |||||||| ||||| | ||| | |
Sbjct 458906 CCAGTCTTGAGACCAAGCTTCCAACCAGCGAAATGCATGCTCGTGATCTTGCCCATGGTT 458965
Query 70909 GGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 70968
|| || ||||| ||||||| |||| |||||||||||||| || | ||| |||
Sbjct 458966 GGCTCCTTCATGTGGATATTCAAGCTCTGAGACTGATCGATGAAGGCACCACGGTCAGCA 459025
Query 70969 GCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATA 71028
||||| | | ||| | || || ||||| | || || |||| | ||| |
Sbjct 459026 GCCATCTGGACGATGTTACGCTGGCTGATCTCCCAGACGGTCTTGTAAAGTGCCTTGAGG 459085
Query 71029 TCTTCTGGAAGGTTTGTATT---CTGAATGGATCCACCATCTGCAATAATCCTATTTTTG 71085
|| ||||| | ||| | | | ||| ||||| || ||| ||||| || | || ||
Sbjct 459086 TCATCTGGGATGTTGGGAATGCGCTGGATGGAACCGTTATCGGCAATGATGCGGTTCTTC 459145
Query 71086 ATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACT 71145
|| | ||| ||| | | ||| | | | | || || || || || ||
Sbjct 459146 ATGTTCTCAGACCACAGACCACGGTCGACAAGATCCTTCAGCAGCCATGGGTTGACGACC 459205
Query 71146 TGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGAC 71205
|| || || || | ||| || | ||| | ||| || || || || || || || | ||
Sbjct 459206 TGGAACTCGCCGGCCAAGACACGACGGGAGTAGATGTTGCTCGTGTATGGCTCGAAGCAC 459265
Query 71206 TCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCAC 71255
||||| |||| || || | || ||||| || ||||||||||| ||
Sbjct 459266 TCATTGAAGCCCATGATCTGTGAGGTCGATGCGGTAGGCATAGGTGCAAC 459315
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671135080883160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |