Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09-
23] 491 sequences; 33,245,410 total letters
Query= NC_004117.1
Length=158482
Score E
Sequences producing significant alignments: (Bits) Value
seq25 87.8 2e-12
seq31 86.0 6e-12
>seq25
Length=313491
Score = 87.8 bits (96), Expect = 2e-12
Identities = 138/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047
|| ||||| || || |||||||| ||||| | |||| || || || || || ||
Sbjct 101494 GTGGATTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCATCCTCAAGCTGCTTGCCG 101553
Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107
|| ||||||| || ||||| ||||| || ||||| || ||||| ||| || ||
Sbjct 101554 GCGAAGATCAGGCGCTGCTGGTCGGGTGGGATGCCCTCCTTGTCCTGAATCTTCGACTTG 101613
Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167
| | || | |||||||| | || || || | || | |||||||||||||| ||
Sbjct 101614 ACGTTGTCAATCGTGTCCGACGACTCAACCTCGAGGGTGATGGTCTTGCCGGTCAAGGTC 101673
Query 143168 TTTACGAATATTTGCATA 143185
|| ||||| || ||||||
Sbjct 101674 TTGACGAAGATCTGCATA 101691
Score = 82.4 bits (90), Expect = 8e-11
Identities = 156/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 142955 TGGCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCG 143014
||||| || || | ||||| || || || | ||||| || || || |||||||| ||
Sbjct 101233 TGGCCACCACGCAGGCGCAACACCAAGTGCAGGGTAGACTCCTTCTGGATGTTGTAGTCT 101292
Query 143015 CTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 143074
| ||| | || ||||| || |||||||| |||| ||||| ||||| || ||
Sbjct 101293 GAAAGTGTCCGGCCATCCTCGAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGT 101352
Query 143075 GGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCT 143134
|| ||||| || || || ||| || || | | || | ||||| | | |||
Sbjct 101353 GGGATGCCCTCCTTATCTTGAATCTTCGACTTAACGTTGTCGATAGTGTCTGAAGATTCC 101412
Query 143135 ACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
|| || | || | ||||||||||| | ||| || || |||||||||||
Sbjct 101413 ACCTCGAGTGTAATTGTCTTGCCGGTAAGTGTCTTCACAAATATTTGCAT 101462
>seq31
Length=267444
Score = 86.0 bits (94), Expect = 6e-12
Identities = 350/541 (65%), Gaps = 17/541 (3%)
Strand=Plus/Plus
Query 50327 TCAACGCTTTCGATAATATTTCGTGTGTGCGTAAAAAGGACGATTGGGCATTGAAATGGA 50386
||||||| ||||||| || |||| | ||||| |||| || ||||| ||| |||||
Sbjct 238466 TCAACGCCATCGATAACATCCCGTGCATCCGTAAGAAGGCTGACTGGGCGTTGCGATGGA 238525
Query 50387 CTaaaaacaaaaaaCTTACTTTGGCCGAACGTTTAGTGGCGTTTGCCATAGTTGAAGGTG 50446
||||||| || || ||| || || || || || ||| ||||| |||
Sbjct 238526 TCTCGGACAAAAATTCCACATTCGCCCTCCGATTGGTTGCTTTCGCCGCTGTTGAGGGTA 238585
Query 50447 TGtttttttCCGGTAGCTTTGCAGCCATATTTTACATTAA-AACCTTAGGCATAATGCCC 50505
| || ||||||||| ||| || ||||| || | | || || | | | | | ||| |
Sbjct 238586 TCTTCTTTTCCGGTTCCTTCGCCGCCATCTTCTGGCTGAAGAAGCGTGGTC-TCATGGCT 238644
Query 50506 GGCCTCACGTTTAGCAACGAGTTGATTTCGCGCGACGAAGGAATGCACACAGACTTTGCG 50565
||||| || || |||||| | || || || || || || |||||||||||||| ||
Sbjct 238645 GGCCTTACATTCTCGAACGAGCTTATCTCCCGTGATGAGGGTATGCACACAGACTTCGCC 238704
Query 50566 TGTTTGTACTACAATACGCGCGTAAATGAAAAATTA-TCATACGAAACAATTTTGGA--- 50621
||| || | | | ||| | |||| || | || | | || || || |
Sbjct 238705 TGT-----CTCCTGTTCTCGC--ACTTGAAGAACAAGCCAGATCAGGCACTTGTGCAGAG 238757
Query 50622 CATGTTCAAAGAAGCCGTCGACATCGAAAAAGAGTTTTTCACGGACGCTTTACCCGTGGC 50681
||| || || || || | || || | ||||| |||| || ||| | || ||
Sbjct 238758 CATCATCGTTGAGGCAGTTGCTATTGAGCAGGAGTTCCTCACAGATGCTCT-GCCATGCA 238816
Query 50682 A-TTGTTGGGCATGAACGCAGACATGATGTGCGAGTACATTGAGTTTGTTGCAGACAGAT 50740
| | | ||||||||||| | | |||| | ||||| ||||| || || ||| |
Sbjct 238817 AGCTTCTCGGCATGAACGCTGGTCTCATGTCACAATACATCGAGTTCGTGGCCGACCGCC 238876
Query 50741 TGTTGTTGCAGCTGGGACAAC-CGAAATACTATAATGCACGTAACCCCTTTCCGTTTATG 50799
|| | ||| || || |||| ||| | ||| || || ||||| || || |||
Sbjct 238877 TGCTTTTGGCACTCGG-CAACAAGAAGTTCTACAACGCCACCAACCCATTCGACTTCATG 238935
Query 50800 AATAACATATCGTTGGAGGGCAAAACAAACTTTTTCGAAAGACGTGTAGGCGAATACAAA 50859
| ||||| || ||| ||||| || ||||| ||||| | ||||| ||||| ||| ||
Sbjct 238936 GAGAACATCTCACTGGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGCGAGTACCAA 238995
Query 50860 A 50860
|
Sbjct 238996 A 238996
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 507011288199120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |