Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09-
23] 491 sequences; 33,245,410 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq31 255 9e-63
>seq31
Length=267444
Score = 255 bits (282), Expect = 9e-63
Identities = 587/866 (68%), Gaps = 31/866 (4%)
Strand=Plus/Plus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| | |||||||| ||||| |||| || || ||||| | || ||| | ||||||
Sbjct 238150 ATCTGGCAGATGTACAAGAAGGCCGAGGCATCGTTCTGGACCGCAGAGGAGATTGATCTG 238209
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
|||||||| ||| |||||||| | | || | | ||| |||||| || || ||
Sbjct 238210 TCCAAGGATCTGCACGATTGGAACAAGCGACTCAATGATGACGAGCGATTCTTCATCTCA 238269
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197
||| || | || ||||| || | || || || || |||||||| || || || || ||
Sbjct 238270 CACGTTCTCGCTTTCTTCGCAGCATCAGACGGCATTGTCAACGAGAACCTTGTCGAG-CG 238328
Query 125198 ATTCT-CTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGA 125256
||| ||| ||| | || ||||||| ||||| || || ||||| |||||||
Sbjct 238329 CTTCAGCTCTGAGGTTCAG-ATCCCAGAGGCACGATGCTTCTATGGTTTCCAGATCATGA 238387
Query 125257 TTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCC-- 125314
| |||||| | ||||| |||| ||||| || ||||||| || || |||| ||
Sbjct 238388 TGGAGAACATCCACTCCGAAACATACTCCCTCCTTATTGACACATATATCAGCGAGCCAA 238447
Query 125315 -GCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGG 125373
||| || |||| || || || ||||| ||||| | | |||| || ||||| ||||
Sbjct 238448 AGCAGCG--AACATAT-CTGTTCAACGCCATCGATAACATCCCGTGCATCCGTAAGAAGG 238504
Query 125374 CTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGG 125433
|| | |||| | | || |||||| ||| | || || | | |||| | || |||| |
Sbjct 238505 CTGACTGGGCGTTGCGATGGATCTCGGACAAAAATTCCACATTCGCCCTCCGATTGGTTG 238564
Query 125434 CATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCA 125493
| |||||||| || ||||| ||||||||||| ||| || || |||||||| ||||| |
Sbjct 238565 CTTTCGCCGCTGTTGAGGGTATCTTCTTTTCCGGTTCCTTCGCCGCCATCTTCTGGCTGA 238624
Query 125494 AGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGG 125553
||||||| || |||||| | || || || | |||||| |||| || || || ||||
Sbjct 238625 AGAAGCGTGGTCTCATGGCTGGCCTTACATTCTCGAACGAGCTTATCTCCCGTGATGAGG 238684
Query 125554 GCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACTATCTGCGTCCCGAGTGCAGA 125612
| | ||| ||||| ||| ||| ||||| |||| ||| || | || ||||
Sbjct 238685 GTATGCACACAGACTTCGCCTGTCTCCTGTTCTCGC-ACT---TGAAGAACAAG-CCAGA 238739
Query 125613 TCCAGC-GATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGTT 125671
|| || || || ||||| | || || || || || || || |||||
Sbjct 238740 TCAGGCACTTGTGCAGAGCATCATCGTT------GAGGCAGTTGCTATTGAGCAGGAGTT 238793
Query 125672 TCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAG-CTAATGTGCGAGT 125730
|| || || | || || || | | ||||||||| || | || |||| | |
Sbjct 238794 CCTCACAGATGCTCTGCCATGCAAGCTTCTCGGCATGAAC-GCTGGTCTCATGTCACAAT 238852
Query 125731 ACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGCAAGA---TTTACA 125787
|||| ||||| ||||| || || || || | | | ||| ||||| | ||||
Sbjct 238853 ACATCGAGTTCGTGGCCGACCGCCTGCTTT---TGGCACTCGGCAACAAGAAGTTCTACA 238909
Query 125788 ACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTTT 125847
|||||| || || || || |||||| | ||| ||||| | || ||||||||||| |
Sbjct 238910 ACGCCACCAACCCATTCGACTTCATGGAGAACATCTCACTGGGCGGCAAGACCAACTTCT 238969
Query 125848 TCGAGAAGAAGGTCAGCGAGTACAAA 125873
|||||||| || |||||||| ||
Sbjct 238970 TCGAGAAGCGTGTTGGCGAGTACCAA 238995
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741054651749160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |