Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09-
23] 491 sequences; 33,245,410 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq25 93.3 4e-14
>seq25
Length=313491
Score = 93.3 bits (102), Expect = 4e-14
Identities = 153/219 (70%), Gaps = 4/219 (2%)
Strand=Plus/Plus
Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGT--TGG 94850
|||||||||||||||| ||||| ||||| || | ||| || | || | ||||| |
Sbjct 101248 CGCAACACCAAGTGCAGGGTAGACTCCTTCTGGATGTTGTAGT--CTGAAAGTGTCCGGC 101305
Query 94851 AATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTT 94910
|||||| ||||| || || | ||||| | | ||||| || || || || || || |
Sbjct 101306 CATCCTCGAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGTGGGATGCCCTCCT 101365
Query 94911 TGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGA 94970
| || | ||| || | ||| ||| | ||| |||||| | || || || | || |
Sbjct 101366 TATCTTGAATCTTCGACTTAACGTTGTCGATAGTGTCTGAAGATTCCACCTCGAGTGTAA 101425
Query 94971 TGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009
| || || || ||||| || |||||||| || |||||||
Sbjct 101426 TTGTCTTGCCGGTAAGTGTCTTCACAAATATTTGCATGC 101464
Score = 82.4 bits (90), Expect = 7e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857
||| | ||| | || |||||||| || | ||| || ||||| | ||| | ||||||
Sbjct 101481 CACAAGGTGTAGCGTGGATTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCATCCTC 101540
Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917
||||| || ||| | ||||| | | ||||| || || || || || || ||||| |
Sbjct 101541 AAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGTGGGATGCCCTCCTTGTCCTG 101600
Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977
||| || | ||||||| | | | ||||| | || || || | |||||||| ||
Sbjct 101601 AATCTTCGACTTGACGTTGTCAATCGTGTCCGACGACTCAACCTCGAGGGTGATGGTCTT 101660
Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || | || || || |||||||||||
Sbjct 101661 GCCGGTCAAGGTCTTGACGAAGATCTGCAT 101690
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448288448612760
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |