Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09-
23] 491 sequences; 33,245,410 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq91 113 7e-21
>seq91
Length=107037
Score = 113 bits (124), Expect = 7e-21
Identities = 87/101 (86%), Gaps = 2/101 (2%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| |||| ||| | | || || ||||||||||| |||||||||||||||||
Sbjct 29892 GCCAAGCGTCACCGCAAGATTT-TGCGTGACAACATCCAAGGTATCACCAAGCCAGCTAT 29834
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
||| ||||| || ||||||||||| ||||||||| ||||||
Sbjct 29833 CCGACGTCTCGCACGTCGTGGTGGTGTCAAGCGTATCTCTG 29793
Score = 86.0 bits (94), Expect = 1e-12
Identities = 113/157 (72%), Gaps = 0/157 (0%)
Strand=Plus/Minus
Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595
|| |||| ||||||| |||| ||| | |||| |||||| || ||||||| || |
Sbjct 29734 TGATCTACGAAGAGACCCGTGGTGTCCTCAAGACATTCCTCGAGGGTGTTATCCGCGACG 29675
Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655
| || || ||||||||||| || || ||||||||||||||| | || | ||||| |
Sbjct 29674 CCGTCACATACACCGAGCACGCCAAGCGCAAGACTGTCACCTCCCTCGACGTTGTCTACG 29615
Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692
| | || || |||||||| | | || ||||| ||
Sbjct 29614 CCCTCAAGCGACAAGGCCGCACCCTGTACGGTTTCGG 29578
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79074751075263
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |