Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09- 23] 491 sequences; 33,245,410 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq91 113 7e-21 >seq91 Length=107037 Score = 113 bits (124), Expect = 7e-21 Identities = 87/101 (86%), Gaps = 2/101 (2%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| |||| ||| | | || || ||||||||||| ||||||||||||||||| Sbjct 29892 GCCAAGCGTCACCGCAAGATTT-TGCGTGACAACATCCAAGGTATCACCAAGCCAGCTAT 29834 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 ||| ||||| || ||||||||||| ||||||||| |||||| Sbjct 29833 CCGACGTCTCGCACGTCGTGGTGGTGTCAAGCGTATCTCTG 29793 Score = 86.0 bits (94), Expect = 1e-12 Identities = 113/157 (72%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595 || |||| ||||||| |||| ||| | |||| |||||| || ||||||| || | Sbjct 29734 TGATCTACGAAGAGACCCGTGGTGTCCTCAAGACATTCCTCGAGGGTGTTATCCGCGACG 29675 Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655 | || || ||||||||||| || || ||||||||||||||| | || | ||||| | Sbjct 29674 CCGTCACATACACCGAGCACGCCAAGCGCAAGACTGTCACCTCCCTCGACGTTGTCTACG 29615 Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 | | || || |||||||| | | || ||||| || Sbjct 29614 CCCTCAAGCGACAAGGCCGCACCCTGTACGGTTTCGG 29578 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074751075263