Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09-
23] 491 sequences; 33,245,410 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq8 179 5e-40
seq31 96.9 4e-15
>seq8
Length=557162
Score = 179 bits (198), Expect = 5e-40
Identities = 454/688 (66%), Gaps = 2/688 (0%)
Strand=Plus/Plus
Query 63164 CAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTT 63223
||| ||||| || |||| || ||||||| | ||| |||| | || || || |
Sbjct 460036 CAAGCCAGGGCACTCATTGGGGCACATCAGGGTCCAAGTGCCGTTCTGCTCGACGCGCTC 460095
Query 63224 CATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTT 63283
||| |||||||| || |||||||| || || ||||| | | | |||||| ||
Sbjct 460096 CATGAAGAGATCTGGGATCCAAAGGGCGTAGAAGAGATCGCGAGCACGGACTTCCTCCTT 460155
Query 63284 TCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTA 63343
|| ||||| || || | |||| | | ||| | ||||| || || | |||
Sbjct 460156 GCCGTGGTTCTTACGGAGGTCCATGAACTGAAAGACATCGGCGTGCCATGGCTCAAGGTA 460215
Query 63344 TATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATT 63403
||||| | | || || || ||||| || ||||| || | ||| | ||| ||||| ||
Sbjct 460216 GATGGCAAAGGCACCTGGGCGCTTGTTGCCACCCTGGTCGACGTAGCGAGCAGTGTTGTT 460275
Query 63404 ATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCT 63463
|| ||||||||||| || | || |||||| ||| | || ||||| || |||||||
Sbjct 460276 GTACACTCTCAACATCGGTACAAGACCGTTGGATGTGCCGTTGGTGCCACCGATATAGGA 460335
Query 63464 TCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAA 63523
||| | ||||| ||||| || ||||| || || || || | || ||||| |
Sbjct 460336 ACCAGTAGCACGGATATTGTGAACATGCAGACCAATACCGCCAGCGTTCTTGGAGATCAT 460395
Query 63524 TGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAG 63583
|| ||| || | ||||| ||||| || || ||||| ||||| ||||| || |
Sbjct 460396 AGCACATGTCTTGAGGGTGTCGTAGATGCCGTCGATGCTGTCATCCTTCATGGCAATCAA 460455
Query 63584 AAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTG 63643
|| ||| || || ||| | ||||| || | || | || || || || ||
Sbjct 460456 GAAGCAGGAAGCCAACTGGGCTTGCGGTGTTCCAGCGCTGAAAAGCGTTGGCGACGCATG 460515
Query 63644 CGTAAACCATTTTTCAGA-AAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATT 63702
|| || | || || | |||| ||||| |||||||| || | || ||||| |
Sbjct 460516 TGTGAAGTACTTCAGCGACATGTAG-TTGTATGTCTCAATCGCAGCCTCAATATCTTCTC 460574
Query 63703 GATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGT 63762
|| || || || || |||||||| | ||| ||||| ||||| ||| ||| |||| ||
Sbjct 460575 CGTGGATACCGACCGCCACACGCATGATCATCTGCTGCGGTCTCTCAGCGACCTTGCCGT 460634
Query 63763 TTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGT 63822
||| | | | ||| ||| |||| ||| || || || || || | ||| ||||
Sbjct 460635 CGATTCTGAGAAGGTATGATCGCTCCAGAGTCTTGAAGCCGAAGTACTGGTAGTTGAAGT 460694
Query 63823 CTCGTTCGTAAATAATAACCGAGTTGAG 63850
| || ||||| | ||| ||||||||||
Sbjct 460695 CGCGGTCGTAGACAATGGCCGAGTTGAG 460722
>seq31
Length=267444
Score = 96.9 bits (106), Expect = 4e-15
Identities = 295/451 (65%), Gaps = 4/451 (1%)
Strand=Plus/Minus
Query 33000 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTC 33059
||| || ||| |||||||| || || ||||| || ||||| || || || || || |
Sbjct 239010 CATGACACCCGCCTTTTGGTACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCC 238951
Query 33060 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCC 33119
|| ||| || || |||||||| || || || ||||| | || || | || || ||
Sbjct 238950 CAGTGAGATGTTCTCCATGAAGTCGAATGGGTTGGTGGCGTTGTAGAACTTCTTGTTGCC 238891
Query 33120 CAATTCAGAAATCAATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATT 33179
| | | ||| || | || || ||||| || || ||| | ||| | || ||
Sbjct 238890 GAGTGCCAAAAGCAGGCGGTCGGCCACGAACTCGATGTATTGTGACATGAGACCAGCGTT 238831
Query 33180 CATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGC 33239
||| || | ||| || ||| ||||| | || || || || || ||||| | || ||
Sbjct 238830 CATGCCGAGAAGCTTGCATGGCAGAGCATCTGTGAGGAACTCCTGCTCAATAGCAACTGC 238771
Query 33240 ATCTGTTATAATAGATCTA-ACGGTTTCTTCA-CTCGGTGGATGCAATAAATGTTTAAAC 33297
|| || || | ||| || | | | | || | | | | | || || |||
Sbjct 238770 CTCAACGATGAT-GCTCTGCACAAGTGCCTGATCTGGCTTGTT-CTTCAAGTGCGAGAAC 238713
Query 33298 ATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAAC 33357
| | ||| ||||| || ||||| |||||| || | || || ||||| || ||
Sbjct 238712 AGGAGACAGGCGAAGTCTGTGTGCATACCCTCATCACGGGAGATAAGCTCGTTCGAGAAT 238653
Query 33358 GTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAA 33417
|| || || | ||| || |||||||| || ||||| || |||| ||||| || || |||
Sbjct 238652 GTAAGGCCAGCCATGAGACCACGCTTCTTCAGCCAGAAGATGGCGGCGAAGGAACCGGAA 238593
Query 33418 AAGAAGATTCCTTCTACTGCAGCAAAGGCAA 33448
|||||||| || || || || || || ||||
Sbjct 238592 AAGAAGATACCCTCAACAGCGGCGAAAGCAA 238562
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622943376661560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |