Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09- 23] 491 sequences; 33,245,410 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq8 378 2e-99 seq50 84.2 6e-11 >seq8 Length=557162 Score = 378 bits (418), Expect = 2e-99 Identities = 1175/1789 (66%), Gaps = 40/1789 (2%) Strand=Plus/Minus Query 363391 TTCGGATATAAGACGATGGAGAAATCCTACCTATCTC-GTATCAATGGTGATATTGTTGA 363449 ||||| | ||||| ||||| ||| ||||| |||| | ||| | || | | | ||| Sbjct 460677 TTCGGCTTCAAGACTCTGGAGCGATCATACCT-TCTCAGAATCGACGGCAAGGTCGCTGA 460619 Query 363450 ACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGC 363509 | |||||||| ||| | |||||||| || | |||||||| | ||| |||| || Sbjct 460618 GAGACCGCAGCAGATGATCATGCGTGTGGCGGTCGGTATCCACGGAGAAGATATTGAGGC 460559 Query 363510 CGCGATTGAAACATATAAGCTTCTAAGT-GCTCGTGTA-TTCACGCACGCCACGCCAACA 363567 |||||||| ||||| || || | | || ||| ||| ||||| || || ||||||| Sbjct 460558 TGCGATTGAGACATACAA-CTAC-ATGTCGCTGAAGTACTTCACACATGCGTCGCCAACG 460501 Query 363568 ATGTACAATGCTGGAACTC-GTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAA 363626 | | || |||||||| | | || || ||| || |||| ||||| | | ||||| Sbjct 460500 CTTTTCAGCGCTGGAACACCGCAAGCC-CAGTTGGCTTCCTGCTTCTTGATTGCCATGAA 460442 Query 363627 GGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAA 363686 ||| || |||||| || |||| ||||| || |||| |||||| | || |||||||| Sbjct 460441 GGATGACAGCATCGACGGCATCTACGACACCCTCAAGACATGTGCTATGATCTCCAAGAA 460382 Query 363687 TGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTAC---ATTC 363742 || ||||| |||||| | | |||||| | ||||| || | ||| | || Sbjct 460381 CGCTGGCGGTATTGGTCTGCATGTTCACAATATCCGTGCTACTG----GTTCCTATATCG 460326 Query 363743 GCGGCAC-AGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACT 363801 | ||||| | || | | || || || || || || ||| | | |||| |||| ||| Sbjct 460325 GTGGCACCAACGGCACA-TCCAACGGTCTTGTACCGATGTTGAGAGTGTACAACAACACT 460267 Query 363802 GCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAG 363861 || | ||||||||||||||||| |||||| ||| || ||||| || || || ||| Sbjct 460266 GCTCGCTACGTCGACCAGGGTGGCAACAAGCGCCCAGGTGCCTTTGCCATCTACCTTGAG 460207 Query 363862 CCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAA 363921 || || |||||| | ||| |||| | || ||||| || ||| || || |||||| Sbjct 460206 CCATGGCACGCCGATGTCTTTCAGTTCATGGACCTCCGTAAGAACCACGGCAAGGAGGAA 460147 Query 363922 TTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTG 363981 | ||||| || ||||| ||||| || |||||| | | || | || ||| ||||||| Sbjct 460146 GTCCGTGCTCGCGATCTCTTCTACGCCCTTTGGATCCCAGATCTCTTCATGGAGCGCGTC 460087 Query 363982 GAGGCAGGTAAG-AATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGT 364040 || |||| | | |||| | || | ||||| | || || || || | || || || Sbjct 460086 GA-GCAGAACGGCACTTGGACCCTGATGTGCCCCAATGAGTGCCCTGGCTTGTCTGACGT 460028 Query 364041 ATGGGGTGACGACT--ATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGT 364098 | ||||| || | | | |||| ||||| ||||| || || |||| |||| Sbjct 460027 CTACGGTGATGAGTTCAAGGAGCTC--TACGAGCGATATGAGAGAGAAGGTAAGGGTCGT 459970 Query 364099 AAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGA 364158 |||| ||| ||| |||||| | |||| ||| || | || | |||| ||||| || Sbjct 459969 GAGACCGTTCGCGCCCAGAAGATCTGGTATGCAATTCTTGAAGCCCAGACCGAGACTGGC 459910 Query 364159 ACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGT 364218 ||||| | || ||||||| ||| | |||||||||| ||||||| || ||||||| Sbjct 459909 ACACCTTTCATCCTGTACAAGGATGCCGCCAACCGCAAGAGCAACCAGAAGAACCTTGGC 459850 Query 364219 ACAATTCAGCAGAGC-AACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGAC 364277 || | ||| || | ||| | || || || || || || ||| | || || || ||| Sbjct 459849 ACCA-TCAAAAGTTCGAACTTGTGCACTGAAATCATGGAGTACTCTGCACCAGATGAGGT 459791 Query 364278 TGCCGTATGTAACCTTGCGTCGATCGCGCTTCCG----GCGTT----TGTAAAAGATGGT 364329 || || || ||| | || ||| | || || ||| |||| | |||| ||| Sbjct 459790 CGCTGTCTGCAACTTGGCCTCGCTTGCTCTGCCGACATACGTTGACATCGAAAACGAGGT 459731 Query 364330 ACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAG 364389 ||| ||| | || | ||| | || || ||| | || ||| |||| | ||||| Sbjct 459730 --TTTCGACTTCAAGAAGCTTCACGAGGTCACCAAGGTTGTCACTCGCAACTTGAACAAG 459673 Query 364390 GTTATCGACAAGAATTATTATCCAATTCCTGAAGC-CGAGCGTTCTAATATGCGTCATCG 364448 ||||| | || ||||| ||| | || || || || | | || | ||||| || Sbjct 459672 ACCATCGAGATCAACTATTACCCAGTACCAGAGGCACGGAAGAGC-AACTTCCGTCACCG 459614 Query 364449 CCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATT 364508 || |||||||| ||||| | || || ||||| | ||| || ||| ||| |||| Sbjct 459613 ACCTATTGGTCTGGGTGTCAACGGTCTTGCTGATGCTTTCTTGGCCCTCCGTATGCCATT 459554 Query 364509 TGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGC 364568 || ||||| || || | || || | | ||||| || || || || |||||| Sbjct 459553 CGACTCGCCCGAGGCCAAGGAGCTCAACATCCATATCTTCGAGACCATCTACCATGCCGC 459494 Query 364569 AATGACTGCTTCGTGTGA-TTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGT 364627 | |||||||| || ||| | | || | || | ||| ||||| |||| | Sbjct 459493 TCTTGAGGCTTCGTGCGAGCTTGCCGAGAAGCTTGGTCCA-TACGAGACTTACCAGGGCT 459435 Query 364628 CCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGAT 364687 | || | ||||| || | | |||| || | ||| || || | | || | Sbjct 459434 CTCCAGTATCGCAAGGCGAGCTTCAGTACGACATGTGGGGCAAGACTCCTACAGACCTGT 459375 Query 364688 GGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTA 364747 || |||||| ||| |||| | |||||||| |||||||| || || Sbjct 459374 GGGACTGGGCCGAGCTCAAGGCCAAGATCGCTCAGCATGGTGTGCGCAACTCGCTGCTTG 459315 Query 364748 CAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAAC 364807 || || ||||| || || || || |||||||| | || ||| ||||||||||| | Sbjct 459314 TTGCACCTATGCCTACCGCATCGACCTCACAGATCATGGGCTTCAATGAGTGCTTCGAGC 459255 Query 364808 CGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATA 364867 | | || ||||| | || || || || || | |||| || || | ||| || || Sbjct 459254 CATACACGAGCAACATCTACTCCCGTCGTGTCTTGGCCGGCGAGTTCCAGGTCGTCAACC 459195 Query 364868 AGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATA 364927 | || | ||||||||| |||||| || |||||| ||| | |||||||||| | Sbjct 459194 CATGGCTGCTGAAGGATCTTGTCGACCGTGGTCTGTGGTCTGAGAACATGAAGAACCGCA 459135 Query 364928 TCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTA 364987 |||| |||| ||| ||||| | ||| |||||| | ||||| || || ||| | Sbjct 459134 TCATTGCCGATAACGGTTCCATCCAGCGCATTCCCAACATCCCAGATGACCTCAAGGCAC 459075 Query 364988 TTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCG 365047 ||||||| ||||| ||||| || | ||| | || | | ||||| || || || | Sbjct 459074 TTTACAAGACCGTCTGGGAGATCAGCCAGCGTAACATCGTCCAGATGGCTGCTGACCGTG 459015 Query 365048 GTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCA 365107 |||| || ||| |||| ||| || || | ||||| |||||||| | || Sbjct 459014 GTGCCTTCATCGATCAGTCTCAGAGCTTGAATATCCACATGAAGGAGCCAACCATGGGCA 458955 Query 365108 AGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 || | || |||||||||| || ||||| ||||| ||||| || Sbjct 458954 AGATCACGAGCATGCATTTCGCTGGTTGGAAGCTTGGTCTCAAGACTGG 458906 >seq50 Length=206302 Score = 84.2 bits (92), Expect = 6e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 65871 GTTACGAATCGTTCCGTCATAATTGCACATATTATCTTCACTTGCCTTTACAAGACAACG 65930 |||||||| || | |||||| ||| ||| || || ||||| ||||||| ||| Sbjct 20235 GTTACGAACAGTACTGTCATACTTGATCATGACTTCCTCCAAAGCCTTCACAAGACGACG 20294 Query 65931 CTGGATGTAACCACTGTTTGCAGTTTTTACCGCGGTATCAACGAGACCTTCACGCCCGGA 65990 ||| ||||||||| | | |||||| || || || || |||| |||||||||||| || Sbjct 20295 CTGAATGTAACCAGTCTCTGCAGTCTTGACAGCAGTGTCAATGAGACCTTCACGACCTCC 20354 Query 65991 CATTGCAGAAAAGAAAAACTC 66011 ||| || ||||| ||||| Sbjct 20355 CATGGCGTGGAAGAAGAACTC 20375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303345400683962