Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09-
23] 491 sequences; 33,245,410 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq31 132 5e-26
seq25 123 2e-23
seq8 118 1e-21
seq64 96.9 3e-15
seq12 96.9 3e-15
>seq31
Length=267444
Score = 132 bits (146), Expect = 5e-26
Identities = 347/517 (67%), Gaps = 13/517 (3%)
Strand=Plus/Plus
Query 46084 ATGCCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCG 46143
|| |||||| | || ||||| | ||||||||| || |||||| || | |
Sbjct 238483 ATCCCGTGCATCCGTAAGAAGGCTGACTGGGCGTTGCGATGGATCTCGGACAAAAATTCC 238542
Query 46144 ACTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGT 46203
|| |||||| || |||| || || || ||| ||||| |||| ||||| ||
Sbjct 238543 ACATTCGCCCTCCGATTGGTTGCTTTCGCCGCTGTTGAGGGTATCTTCTTTTCCGGTTCC 238602
Query 46204 TTTGCCGCCATCTTTTACATCAA-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAA 46262
|| ||||||||||| | | || || | || | ||||| | ||||| || || ||
Sbjct 238603 TTCGCCGCCATCTTCTGGCTGAAGAAGCGTGGTC-TCATGGCTGGCCTTACATTCTCGAA 238661
Query 46263 CGAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACAC 46322
|||||| || || || || ||||| |||| || ||||| || |||||| || | | |
Sbjct 238662 CGAGCTTATCTCCCGTGATGAGGGTATGCACACAGACTTCGCCTGTCTC--CTGTT-CTC 238718
Query 46323 TCGCGTGCACGACAAGCTTGCGCCCGACACC-GTGCTGAGCATGTTCAAGGAGGCGGTGG 46381
| | || | |||||| | | | ||| |||| |||||| || ||||| || |
Sbjct 238719 GCACTTGAAGAACAAGCCAGATCAGG-CACTTGTGCAGAGCATCATCGTTGAGGCAGTTG 238777
Query 46382 CCATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCC--CTGCTGGGCATGAACGC 46439
| |||||| ||||||| | || | || ||||| ||| || || |||||||||||
Sbjct 238778 CTATTGAGCAGGAGTTCCTCACAGATGCTCTGCCA--TGCAAGCTTCTCGGCATGAACGC 238835
Query 46440 ACAGTC-AATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACC 46498
||| |||| | ||||||||||| || || ||||| ||||| || || |
Sbjct 238836 -TGGTCTCATGTCACAATACATCGAGTTCGTGGCCGACCGCCTGCTTTTGGCACTCGGCA 238894
Query 46499 AGCCGAAGCATTTTCACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGG 46558
| |||| | |||| ||| ||||| || || ||| | |||||||| |||| |
Sbjct 238895 ACAAGAAGTTCTACAACGCCACCAACCCATTCGACTTCATGGAGAACATCTCACTGGGCG 238954
Query 46559 GCAAAACTAATTTTTTCGAAAAGCGCGTCGGCGAGTA 46595
|||| || || || ||||| ||||| || ||||||||
Sbjct 238955 GCAAGACCAACTTCTTCGAGAAGCGTGTTGGCGAGTA 238991
>seq25
Length=313491
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
|||||| || | || ||||| | |||| || || ||||| || |||||||| |||||
Sbjct 101463 GCCACCACGGAGGCGGAGCACAAGGTGTAGCGTGGATTCCTTCTGGATGTTGTAGTCGCT 101522
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| |||||| ||||| ||||||||||| ||| |||| | ||||||||||| || ||
Sbjct 101523 GAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGTGG 101582
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
||| || || ||||| || ||| ||||| | || | || || | ||||| |
Sbjct 101583 GATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCAATCGTGTCCGACGACTCAAC 101642
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| ||| | ||| || ||||| | || || ||||| ||||||||
Sbjct 101643 CTCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 101690
Score = 116 bits (128), Expect = 3e-21
Identities = 106/134 (79%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| ||| || || | || | ||| |||||| ||||||||||| |||||
Sbjct 101692 CCACCACGCAGACGAAGGACAAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTG 101751
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| ||||| ||||||||||||||| |||| || |||||||||||||||||
Sbjct 101752 AGGGTGCGACCATCCTCGAGCTGCTTGCCTGCGAAGATCAAGCGCTGCTGGTCCGGAGGA 101811
Query 131128 ATTCCTTCTTTGTC 131141
|| || || |||||
Sbjct 101812 ATACCCTCCTTGTC 101825
Score = 98.7 bits (108), Expect = 9e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
|||||| |||| |||| ||| || || | ||| |||||||| || |||||||| ||
Sbjct 101235 GCCACCACGCAGGCGCAACACCAAGTGCAGGGTAGACTCCTTCTGGATGTTGTAGTCTGA 101294
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| || || ||||| |||||||| || ||| |||| | |||||||||||| || ||
Sbjct 101295 AAGTGTCCGGCCATCCTCGAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGTGG 101354
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
||| || || || || || ||| ||| | | || | ||| || | || || |
Sbjct 101355 GATGCCCTCCTTATCTTGAATCTTCGACTTAACGTTGTCGATAGTGTCTGAAGATTCCAC 101414
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235
|||| |||| || || ||||| || || || || || || ||||||
Sbjct 101415 CTCGAGTGTAATTGTCTTGCCGGTAAGTGTCTTCACAAATATTTGCATG 101463
>seq8
Length=557162
Score = 118 bits (130), Expect = 1e-21
Identities = 604/946 (64%), Gaps = 34/946 (4%)
Strand=Plus/Plus
Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117
||||||||||| |||||||||||||| |||||||| | || | ||| |||| | ||
Sbjct 459197 TTGACGACCTGGAACTCGCCGGCCAAGACACGACGGGAGTAGATGTTGCTCGTGTATGGC 459256
Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177
|| || |||| || ||||| ||| || | ||||| |||||| ||||| || ||
Sbjct 459257 TCGAAGCACTCATTGAAGCCCATGATCTGTGAGGTCGATGCGGTAGGCATAGGTGCAACA 459316
Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237
| | || ||||||| || |||| ||| | |||| ||| |||| |||||
Sbjct 459317 AGCAGCGAGTTGCGCACACCATGCTGAGCGATCTTGGCCTTGAGCTCGGCCCAGTCCCAC 459376
Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCT-CGCTGGCGGGGCT 145296
|| || || || | |||||||||||||||| | ||| | || | || |
Sbjct 459377 AGGTCTGTAGGAGTCTTGCCCCACATGTCGTACTGAAGCTCGCCTTGCGATACTGGAGAG 459436
Query 145297 GCCTTGAAAGGAACTGTAACTGCCCCAAG--TTTTGGCGAGCTCGCAACTCGCCTCCAGA 145354
||| | ||| | ||| || ||||| | | ||| |||||||| ||||| |||
Sbjct 459437 CCCTGGTAAGTCTC-GTA--TGGACCAAGCTTCTCGGCAAGCTCGCACGAAGCCTCAAGA 459493
Query 145355 GCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCG 145414
||| | || || |||||| || || |||||||| | | || || |||
Sbjct 459494 GCGGCATGGTAGATGGTCTCGAAGATATGGATGTTGAGCTCCTTGGCCTCGGGCGAGTCG 459553
Query 145415 TACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGC 145474
| ||||| || || | |||||||| || || || | | |||| || || ||
Sbjct 459554 AATGGCATACGGAGGGCCAAGAAAGCATCAGCAAGACCGTTGACACCCAGACCAATAGGT 459613
Query 145475 CGATGTTTCATGTTGCTCATCCTCGCCGACTCG-ATAGGATATCGATTACGGTCGATAAT 145533
|| || | ||||||| ||| ||| || | | || || || ||||| |
Sbjct 459614 CGGTGACGGAAGTTGCTCTTCCGTGCC-TCTGGTACTGGGTAATAGTTGATCTCGATGGT 459672
Query 145534 TTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAACCG 145593
|| |||||||| || || ||||| || | | | | ||| | ||||| ||
Sbjct 459673 CTTGTTCAAGTTGCGAGTGACAACCTTGGTGACCTCGTGAAGCTTCTTGAAGTCGAA--- 459729
Query 145594 AGCCTCGTCAACGACCACACAGCTATTGACG-----GCGATCGACGCCAAATTACAAACT 145648
| |||||| ||| || | || || || || | ||| ||||| || || ||
Sbjct 459730 AACCTCGTTTTCGATGTCA-ACGTA-TGTCGGCAGAGCAAGCGAGGCCAAGTTGCAGACA 459787
Query 145649 GCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATG 145708
|| ||| || | | ||| | | ||| || | |||||| || || |||||||
Sbjct 459788 GCGACCTCATCTGGTGCAGAGTACTCCATGATTTCAGTGCACAAGTTCGAACTTTTGATG 459847
Query 145709 GTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGT 145768
|| || || || | ||| || || || | |||| || |||||||| || ||| | |||
Sbjct 459848 GTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTGGCGGCATCCTTGTACAGGATGAAAGGT 459907
Query 145769 CCGCCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGCAAGTC--CTGCGCACGCACCT 145826
||||||||| ||| | || || || | | || || ||| || || ||
Sbjct 459908 GTGCCAGTCTCGGTCTG-GGCTTCAAGA-ATTGCATACCAGATCTTCTGGGCGCGAAC-- 459963
Query 145827 GCTGCTGGTAGCGGCCCT---CTTCT---TCGTATTTCCTGTAGAGCTCCTCAAACGCGG 145880
| | | || |||| ||||| || ||| | ||||||||||| ||| |
Sbjct 459964 GGT----CTCACGACCCTTACCTTCTCTCTCATATCGCTCGTAGAGCTCCTTGAACTCAT 460019
Query 145881 AACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGT 145940
||||||| || |||| ||| || |||| ||||| |||||||| | ||| |||||
Sbjct 460020 CACCGTAGACGTCAGACAAGCCAGGGCACTCATTGGGGCACATCAGGGTCCAAGTGCCGT 460079
Query 145941 TGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTA 145986
| | |||||||||||| || | |||||| | ||| || |||||
Sbjct 460080 TCTGCTCGACGCGCTCCATGAAGAGATCTGGGATCCAAAGGGCGTA 460125
>seq64
Length=168546
Score = 96.9 bits (106), Expect = 3e-15
Identities = 130/181 (72%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104
|||| ||||||||||| || || ||||| || || |||||||| || ||| |||
Sbjct 20796 CCTTCTGAATGTTGTAGTCCGACAGAGTGCGGCCATCTTCAAGCTGCTTTCCGGCGAAGA 20737
Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164
| ||||||||||||||||| || || || || ||||| ||| || ||||| | |
Sbjct 20736 TCAAACGCTGCTGGTCCGGTGGAATGCCCTCCTTGTCTTGGATCTTGCTCTTGACATTGT 20677
Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224
| | || ||| | ||||||| |||| || | ||| || || || || || |||||||
Sbjct 20676 CGATGGTGTCGCTAGACTCGACTTCGAGCGTGATGGTCTTGCCAGTGAGGGTCTTTACGA 20617
Query 131225 A 131225
|
Sbjct 20616 A 20616
>seq12
Length=397188
Score = 96.9 bits (106), Expect = 3e-15
Identities = 104/138 (75%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| ||| || || | ||| | ||| |||||| || |||||||| ||
Sbjct 53176 CCACCACGCAGACGGAGGACGAGATGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAG 53235
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| ||||| ||||||||||| ||| |||| | |||||||||||||| |||
Sbjct 53236 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGTGGG 53295
Query 131128 ATTCCTTCTTTGTCGGTG 131145
|| || || ||||| |||
Sbjct 53296 ATCCCCTCCTTGTCTGTG 53313
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472009903021440
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