Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09- 23] 491 sequences; 33,245,410 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq31 132 5e-26 seq25 123 2e-23 seq8 118 1e-21 seq64 96.9 3e-15 seq12 96.9 3e-15 >seq31 Length=267444 Score = 132 bits (146), Expect = 5e-26 Identities = 347/517 (67%), Gaps = 13/517 (3%) Strand=Plus/Plus Query 46084 ATGCCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCG 46143 || |||||| | || ||||| | ||||||||| || |||||| || | | Sbjct 238483 ATCCCGTGCATCCGTAAGAAGGCTGACTGGGCGTTGCGATGGATCTCGGACAAAAATTCC 238542 Query 46144 ACTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGT 46203 || |||||| || |||| || || || ||| ||||| |||| ||||| || Sbjct 238543 ACATTCGCCCTCCGATTGGTTGCTTTCGCCGCTGTTGAGGGTATCTTCTTTTCCGGTTCC 238602 Query 46204 TTTGCCGCCATCTTTTACATCAA-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAA 46262 || ||||||||||| | | || || | || | ||||| | ||||| || || || Sbjct 238603 TTCGCCGCCATCTTCTGGCTGAAGAAGCGTGGTC-TCATGGCTGGCCTTACATTCTCGAA 238661 Query 46263 CGAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACAC 46322 |||||| || || || || ||||| |||| || ||||| || |||||| || | | | Sbjct 238662 CGAGCTTATCTCCCGTGATGAGGGTATGCACACAGACTTCGCCTGTCTC--CTGTT-CTC 238718 Query 46323 TCGCGTGCACGACAAGCTTGCGCCCGACACC-GTGCTGAGCATGTTCAAGGAGGCGGTGG 46381 | | || | |||||| | | | ||| |||| |||||| || ||||| || | Sbjct 238719 GCACTTGAAGAACAAGCCAGATCAGG-CACTTGTGCAGAGCATCATCGTTGAGGCAGTTG 238777 Query 46382 CCATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCC--CTGCTGGGCATGAACGC 46439 | |||||| ||||||| | || | || ||||| ||| || || ||||||||||| Sbjct 238778 CTATTGAGCAGGAGTTCCTCACAGATGCTCTGCCA--TGCAAGCTTCTCGGCATGAACGC 238835 Query 46440 ACAGTC-AATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACC 46498 ||| |||| | ||||||||||| || || ||||| ||||| || || | Sbjct 238836 -TGGTCTCATGTCACAATACATCGAGTTCGTGGCCGACCGCCTGCTTTTGGCACTCGGCA 238894 Query 46499 AGCCGAAGCATTTTCACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGG 46558 | |||| | |||| ||| ||||| || || ||| | |||||||| |||| | Sbjct 238895 ACAAGAAGTTCTACAACGCCACCAACCCATTCGACTTCATGGAGAACATCTCACTGGGCG 238954 Query 46559 GCAAAACTAATTTTTTCGAAAAGCGCGTCGGCGAGTA 46595 |||| || || || ||||| ||||| || |||||||| Sbjct 238955 GCAAGACCAACTTCTTCGAGAAGCGTGTTGGCGAGTA 238991 >seq25 Length=313491 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | || ||||| | |||| || || ||||| || |||||||| ||||| Sbjct 101463 GCCACCACGGAGGCGGAGCACAAGGTGTAGCGTGGATTCCTTCTGGATGTTGTAGTCGCT 101522 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | |||||| ||||| ||||||||||| ||| |||| | ||||||||||| || || Sbjct 101523 GAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGTGG 101582 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || ||||| || ||| ||||| | || | || || | ||||| | Sbjct 101583 GATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCAATCGTGTCCGACGACTCAAC 101642 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||| | ||| || ||||| | || || ||||| |||||||| Sbjct 101643 CTCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 101690 Score = 116 bits (128), Expect = 3e-21 Identities = 106/134 (79%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| || || | || | ||| |||||| ||||||||||| ||||| Sbjct 101692 CCACCACGCAGACGAAGGACAAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTG 101751 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| ||||||||||||||| |||| || ||||||||||||||||| Sbjct 101752 AGGGTGCGACCATCCTCGAGCTGCTTGCCTGCGAAGATCAAGCGCTGCTGGTCCGGAGGA 101811 Query 131128 ATTCCTTCTTTGTC 131141 || || || ||||| Sbjct 101812 ATACCCTCCTTGTC 101825 Score = 98.7 bits (108), Expect = 9e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| |||| |||| ||| || || | ||| |||||||| || |||||||| || Sbjct 101235 GCCACCACGCAGGCGCAACACCAAGTGCAGGGTAGACTCCTTCTGGATGTTGTAGTCTGA 101294 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | || || ||||| |||||||| || ||| |||| | |||||||||||| || || Sbjct 101295 AAGTGTCCGGCCATCCTCGAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGTGG 101354 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || || || || ||| ||| | | || | ||| || | || || | Sbjct 101355 GATGCCCTCCTTATCTTGAATCTTCGACTTAACGTTGTCGATAGTGTCTGAAGATTCCAC 101414 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| |||| || || ||||| || || || || || || |||||| Sbjct 101415 CTCGAGTGTAATTGTCTTGCCGGTAAGTGTCTTCACAAATATTTGCATG 101463 >seq8 Length=557162 Score = 118 bits (130), Expect = 1e-21 Identities = 604/946 (64%), Gaps = 34/946 (4%) Strand=Plus/Plus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||||||||||| |||||||||||||| |||||||| | || | ||| |||| | || Sbjct 459197 TTGACGACCTGGAACTCGCCGGCCAAGACACGACGGGAGTAGATGTTGCTCGTGTATGGC 459256 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 || || |||| || ||||| ||| || | ||||| |||||| ||||| || || Sbjct 459257 TCGAAGCACTCATTGAAGCCCATGATCTGTGAGGTCGATGCGGTAGGCATAGGTGCAACA 459316 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 | | || ||||||| || |||| ||| | |||| ||| |||| ||||| Sbjct 459317 AGCAGCGAGTTGCGCACACCATGCTGAGCGATCTTGGCCTTGAGCTCGGCCCAGTCCCAC 459376 Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCT-CGCTGGCGGGGCT 145296 || || || || | |||||||||||||||| | ||| | || | || | Sbjct 459377 AGGTCTGTAGGAGTCTTGCCCCACATGTCGTACTGAAGCTCGCCTTGCGATACTGGAGAG 459436 Query 145297 GCCTTGAAAGGAACTGTAACTGCCCCAAG--TTTTGGCGAGCTCGCAACTCGCCTCCAGA 145354 ||| | ||| | ||| || ||||| | | ||| |||||||| ||||| ||| Sbjct 459437 CCCTGGTAAGTCTC-GTA--TGGACCAAGCTTCTCGGCAAGCTCGCACGAAGCCTCAAGA 459493 Query 145355 GCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCG 145414 ||| | || || |||||| || || |||||||| | | || || ||| Sbjct 459494 GCGGCATGGTAGATGGTCTCGAAGATATGGATGTTGAGCTCCTTGGCCTCGGGCGAGTCG 459553 Query 145415 TACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGC 145474 | ||||| || || | |||||||| || || || | | |||| || || || Sbjct 459554 AATGGCATACGGAGGGCCAAGAAAGCATCAGCAAGACCGTTGACACCCAGACCAATAGGT 459613 Query 145475 CGATGTTTCATGTTGCTCATCCTCGCCGACTCG-ATAGGATATCGATTACGGTCGATAAT 145533 || || | ||||||| ||| ||| || | | || || || ||||| | Sbjct 459614 CGGTGACGGAAGTTGCTCTTCCGTGCC-TCTGGTACTGGGTAATAGTTGATCTCGATGGT 459672 Query 145534 TTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAACCG 145593 || |||||||| || || ||||| || | | | | ||| | ||||| || Sbjct 459673 CTTGTTCAAGTTGCGAGTGACAACCTTGGTGACCTCGTGAAGCTTCTTGAAGTCGAA--- 459729 Query 145594 AGCCTCGTCAACGACCACACAGCTATTGACG-----GCGATCGACGCCAAATTACAAACT 145648 | |||||| ||| || | || || || || | ||| ||||| || || || Sbjct 459730 AACCTCGTTTTCGATGTCA-ACGTA-TGTCGGCAGAGCAAGCGAGGCCAAGTTGCAGACA 459787 Query 145649 GCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATG 145708 || ||| || | | ||| | | ||| || | |||||| || || ||||||| Sbjct 459788 GCGACCTCATCTGGTGCAGAGTACTCCATGATTTCAGTGCACAAGTTCGAACTTTTGATG 459847 Query 145709 GTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGT 145768 || || || || | ||| || || || | |||| || |||||||| || ||| | ||| Sbjct 459848 GTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTGGCGGCATCCTTGTACAGGATGAAAGGT 459907 Query 145769 CCGCCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGCAAGTC--CTGCGCACGCACCT 145826 ||||||||| ||| | || || || | | || || ||| || || || Sbjct 459908 GTGCCAGTCTCGGTCTG-GGCTTCAAGA-ATTGCATACCAGATCTTCTGGGCGCGAAC-- 459963 Query 145827 GCTGCTGGTAGCGGCCCT---CTTCT---TCGTATTTCCTGTAGAGCTCCTCAAACGCGG 145880 | | | || |||| ||||| || ||| | ||||||||||| ||| | Sbjct 459964 GGT----CTCACGACCCTTACCTTCTCTCTCATATCGCTCGTAGAGCTCCTTGAACTCAT 460019 Query 145881 AACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGT 145940 ||||||| || |||| ||| || |||| ||||| |||||||| | ||| ||||| Sbjct 460020 CACCGTAGACGTCAGACAAGCCAGGGCACTCATTGGGGCACATCAGGGTCCAAGTGCCGT 460079 Query 145941 TGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTA 145986 | | |||||||||||| || | |||||| | ||| || ||||| Sbjct 460080 TCTGCTCGACGCGCTCCATGAAGAGATCTGGGATCCAAAGGGCGTA 460125 >seq64 Length=168546 Score = 96.9 bits (106), Expect = 3e-15 Identities = 130/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| ||||||||||| || || ||||| || || |||||||| || ||| ||| Sbjct 20796 CCTTCTGAATGTTGTAGTCCGACAGAGTGCGGCCATCTTCAAGCTGCTTTCCGGCGAAGA 20737 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | ||||||||||||||||| || || || || ||||| ||| || ||||| | | Sbjct 20736 TCAAACGCTGCTGGTCCGGTGGAATGCCCTCCTTGTCTTGGATCTTGCTCTTGACATTGT 20677 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | || ||| | ||||||| |||| || | ||| || || || || || ||||||| Sbjct 20676 CGATGGTGTCGCTAGACTCGACTTCGAGCGTGATGGTCTTGCCAGTGAGGGTCTTTACGA 20617 Query 131225 A 131225 | Sbjct 20616 A 20616 >seq12 Length=397188 Score = 96.9 bits (106), Expect = 3e-15 Identities = 104/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| || || | ||| | ||| |||||| || |||||||| || Sbjct 53176 CCACCACGCAGACGGAGGACGAGATGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAG 53235 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| ||||||||||| ||| |||| | |||||||||||||| ||| Sbjct 53236 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGTGGG 53295 Query 131128 ATTCCTTCTTTGTCGGTG 131145 || || || ||||| ||| Sbjct 53296 ATCCCCTCCTTGTCTGTG 53313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472009903021440