Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09- 23] 491 sequences; 33,245,410 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq40 116 2e-21 >seq40 Length=240523 Score = 116 bits (128), Expect = 2e-21 Identities = 196/284 (69%), Gaps = 0/284 (0%) Strand=Plus/Plus Query 6201 TTCTACCGCTACAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTAAGGGAAACGGTATT 6260 |||||||||||||| ||| ||| ||| ||||||| || || ||||| |||||||| Sbjct 232107 TTCTACCGCTACAAGATGGAGCGTATCCAGTCCAAGGTGGAAGGAAAGGGCAACGGTATC 232166 Query 6261 AAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCCACCTAC 6320 || ||||| | |||||| | | | ||||| | |||| ||||| | | ||| Sbjct 232167 AAGACCGTTGTCGTCAACCTTGCCAATGTCGCCTACCAACTCGCTCGCCCGCCAAGCTAT 232226 Query 6321 CCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACGAG 6380 | ||||| || || | ||| |||||||| ||||| | |||| | ||| |||| Sbjct 232227 GTCATCAAATACTTTGGCTTCGAGCTTGGCGCCCAGACCAACATTGACCCCAAGGACGAT 232286 Query 6381 CGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGCTTT 6440 |||| ||| | ||||| | || | | | |||||||| |||| || || ||||| Sbjct 232287 CGCTGGATCATCAACGGTGCACACGAGGCCACGAAGCTGCAAGACTACCTCGATGGCTTC 232346 Query 6441 ATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGAC 6484 || |||||| || || || |||| ||| | ||||| ||||| Sbjct 232347 ATCAACAAGTTCGTCCTCTGCAGGGACTGCAAGAACCCCGAGAC 232390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334945195655021