Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09-
23] 491 sequences; 33,245,410 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq40 116 2e-21
>seq40
Length=240523
Score = 116 bits (128), Expect = 2e-21
Identities = 196/284 (69%), Gaps = 0/284 (0%)
Strand=Plus/Plus
Query 6201 TTCTACCGCTACAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTAAGGGAAACGGTATT 6260
|||||||||||||| ||| ||| ||| ||||||| || || ||||| ||||||||
Sbjct 232107 TTCTACCGCTACAAGATGGAGCGTATCCAGTCCAAGGTGGAAGGAAAGGGCAACGGTATC 232166
Query 6261 AAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCCACCTAC 6320
|| ||||| | |||||| | | | ||||| | |||| ||||| | | |||
Sbjct 232167 AAGACCGTTGTCGTCAACCTTGCCAATGTCGCCTACCAACTCGCTCGCCCGCCAAGCTAT 232226
Query 6321 CCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACGAG 6380
| ||||| || || | ||| |||||||| ||||| | |||| | ||| ||||
Sbjct 232227 GTCATCAAATACTTTGGCTTCGAGCTTGGCGCCCAGACCAACATTGACCCCAAGGACGAT 232286
Query 6381 CGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGCTTT 6440
|||| ||| | ||||| | || | | | |||||||| |||| || || |||||
Sbjct 232287 CGCTGGATCATCAACGGTGCACACGAGGCCACGAAGCTGCAAGACTACCTCGATGGCTTC 232346
Query 6441 ATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGAC 6484
|| |||||| || || || |||| ||| | ||||| |||||
Sbjct 232347 ATCAACAAGTTCGTCCTCTGCAGGGACTGCAAGAACCCCGAGAC 232390
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334945195655021
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |