Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09- 23] 491 sequences; 33,245,410 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq8 181 1e-40 >seq8 Length=557162 Score = 181 bits (200), Expect = 1e-40 Identities = 452/684 (66%), Gaps = 2/684 (0%) Strand=Plus/Plus Query 63023 CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 63082 ||||| || |||| || ||||||| | ||| |||| | || || || | ||| Sbjct 460040 CCAGGGCACTCATTGGGGCACATCAGGGTCCAAGTGCCGTTCTGCTCGACGCGCTCCATG 460099 Query 63083 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCT 63142 |||||||| || |||||||| || || ||||| | | | |||||| || || Sbjct 460100 AAGAGATCTGGGATCCAAAGGGCGTAGAAGAGATCGCGAGCACGGACTTCCTCCTTGCCG 460159 Query 63143 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 63202 ||||| || || | |||| | | ||| | ||||| || || | ||| ||| Sbjct 460160 TGGTTCTTACGGAGGTCCATGAACTGAAAGACATCGGCGTGCCATGGCTCAAGGTAGATG 460219 Query 63203 GCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 63262 || | | || || || ||||| || ||||| || | ||| | ||| ||||| || || Sbjct 460220 GCAAAGGCACCTGGGCGCTTGTTGCCACCCTGGTCGACGTAGCGAGCAGTGTTGTTGTAC 460279 Query 63263 ACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCA 63322 ||||||||||| || | || ||| |||||||| || ||||| || ||||||| ||| Sbjct 460280 ACTCTCAACATCGGTACAAGACCGTTGGATGTGCCGTTGGTGCCACCGATATAGGAACCA 460339 Query 63323 CTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCG 63382 | ||||| ||||| || ||||| || || || || | || ||||| | || Sbjct 460340 GTAGCACGGATATTGTGAACATGCAGACCAATACCGCCAGCGTTCTTGGAGATCATAGCA 460399 Query 63383 CATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAA 63442 ||| || | || || |||||||| || || || |||||| ||||| || | || Sbjct 460400 CATGTCTTGAGGGTGTCGTAGATGCCGTCGATGCTGTCATCCTTCATGGCAATCAAGAAG 460459 Query 63443 CAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTA 63502 ||| || || ||| | ||||| || | || | || || || || || || Sbjct 460460 CAGGAAGCCAACTGGGCTTGCGGTGTTCCAGCGCTGAAAAGCGTTGGCGACGCATGTGTG 460519 Query 63503 AACCATTTTTCAGA-AAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATG 63561 || | || || | |||| ||||| |||||||| || | || ||||| | || Sbjct 460520 AAGTACTTCAGCGACATGTAG-TTGTATGTCTCAATCGCAGCCTCAATATCTTCTCCGTG 460578 Query 63562 AATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTAT 63621 || || || || |||||||| | ||| ||||| ||||| ||| ||| |||| || || Sbjct 460579 GATACCGACCGCCACACGCATGATCATCTGCTGCGGTCTCTCAGCGACCTTGCCGTCGAT 460638 Query 63622 TTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCG 63681 | | | | ||| ||| |||| ||| || || || || || | ||| ||||| || Sbjct 460639 TCTGAGAAGGTATGATCGCTCCAGAGTCTTGAAGCCGAAGTACTGGTAGTTGAAGTCGCG 460698 Query 63682 TTCGTAAATAATAACCGAGTTGAG 63705 ||||| | ||| |||||||||| Sbjct 460699 GTCGTAGACAATGGCCGAGTTGAG 460722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633628111083600