Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09- 23] 491 sequences; 33,245,410 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq25 120 3e-22 >seq25 Length=313491 Score = 120 bits (132), Expect = 3e-22 Identities = 156/213 (73%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| |||||||| || ||||||| |||| || |||||||| Sbjct 101690 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTTGAGTCGTCG 101631 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || || | ||| | || | ||| ||||| || || || ||||| ||||| Sbjct 101630 GACACGATTGACAACGTCAAGTCGAAGATTCAG-GACAAGGAGGGCATCCCACCCGACCA 101572 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||||| | || || |||||||| || | || |||| ||||| | |||| ||||| Sbjct 101571 GCAGCGCCTGATCTTCGCCGGCAAGCAGCTTGAGGATGGCCGCACCCTCAGCGACTACAA 101512 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || |||||||||||||| | ||||| Sbjct 101511 CATCCAGAAGGAATCCACGCTACACCTTGTGCT 101479 Score = 86.0 bits (94), Expect = 5e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||||||||| ||||| | ||||| || | || ||| |||| ||||| || || Sbjct 101462 ATGCAAATATTTGTGAAGACACTTACCGGCAAGACAATTACACTCGAGGTGGAATCTTCA 101403 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||||||||| | ||| | || | ||| || || || || || ||||||||||| Sbjct 101402 GACACTATCGACAACGTTAAGTCGAAGATTCA-AGATAAGGAGGGCATCCCACCTGACCA 101344 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||||| | || || || || || || | || |||| || || | || ||||| Sbjct 101343 GCAGCGTCTCATCTTCGCTGGTAAGCAGCTCGAGGATGGCCGGACACTTTCAGACTACAA 101284 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTG 25208 || || || || || || || || || ||| Sbjct 101283 CATCCAGAAGGAGTCTACCCTGCACTTGGTG 101253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433325406938165