Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09- 23] 491 sequences; 33,245,410 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq25 114 1e-20 seq64 93.3 4e-14 seq12 87.8 2e-12 >seq25 Length=313491 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || || ||||| || || |||| || || || || | | Sbjct 101690 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTTGAGTCGTCG 101631 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | |||| || ||||| ||||||||||| || |||||||| || Sbjct 101630 GACACGATTGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGCATCCCACCCGACCAG 101571 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || |||||||| ||| | |||||| ||||||| || ||| |||||| Sbjct 101570 CAGCGCCTGATCTTCGCCGGCAAGCAGCTTGAGGATGGCCGCACCCTCAGCGACTACAAC 101511 Query 22399 ATTCAAAAAGAATCCACCATACA 22421 || || || |||||||| |||| Sbjct 101510 ATCCAGAAGGAATCCACGCTACA 101488 >seq64 Length=168546 Score = 93.3 bits (102), Expect = 4e-14 Identities = 119/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || || || || |||| || ||||| || | | ||| ||| | ||| || |||| Sbjct 20631 ACTGGCAAGACCATCACGCTCGAAGTCGAGTCTAGCGACACCATCGACAATGTCAAGAGC 20690 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || |||||||||||||| |||||||| || || || ||| | || || ||||| || Sbjct 20691 AAGATCCAAGACAAGGAGGGCATTCCACCGGACCAGCAGCGTTTGATCTTCGCCGGAAAG 20750 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406 ||| | || ||| |||||| | || || ||||||||||| || Sbjct 20751 CAGCTTGAAGATGGCCGCACTCTGTCGGACTACAACATTCAGAA 20794 >seq12 Length=397188 Score = 87.8 bits (96), Expect = 2e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 22311 AGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGA 22370 |||||||||||| || ||||| || || || || || || || |||||||| ||| | || Sbjct 53310 AGACAAGGAGGGGATCCCACCGGACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGA 53251 Query 22371 GGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTAGTTTT 22430 |||| ||||||| |||| || |||||||| || || || |||| | ||| | || | Sbjct 53250 GGATGGCCGCACCCTCTCGGACTACAACATCCAGAAGGAGAGCACCCTCCATCTCGTCCT 53191 Query 22431 GCGATTGCGCGGAGGT 22446 || |||| || ||| Sbjct 53190 CCGTCTGCGTGGTGGT 53175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419725488321415