Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09-
23] 491 sequences; 33,245,410 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq25 114 1e-20
seq64 93.3 4e-14
seq12 87.8 2e-12
>seq25
Length=313491
Score = 114 bits (126), Expect = 1e-20
Identities = 147/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || || || ||||| || || |||| || || || || | |
Sbjct 101690 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTTGAGTCGTCG 101631
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| | |||| || ||||| ||||||||||| || |||||||| ||
Sbjct 101630 GACACGATTGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGCATCCCACCCGACCAG 101571
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || || || || |||||||| ||| | |||||| ||||||| || ||| ||||||
Sbjct 101570 CAGCGCCTGATCTTCGCCGGCAAGCAGCTTGAGGATGGCCGCACCCTCAGCGACTACAAC 101511
Query 22399 ATTCAAAAAGAATCCACCATACA 22421
|| || || |||||||| ||||
Sbjct 101510 ATCCAGAAGGAATCCACGCTACA 101488
>seq64
Length=168546
Score = 93.3 bits (102), Expect = 4e-14
Identities = 119/164 (73%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302
|| || || || |||| || ||||| || | | ||| ||| | ||| || ||||
Sbjct 20631 ACTGGCAAGACCATCACGCTCGAAGTCGAGTCTAGCGACACCATCGACAATGTCAAGAGC 20690
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|| || |||||||||||||| |||||||| || || || ||| | || || ||||| ||
Sbjct 20691 AAGATCCAAGACAAGGAGGGCATTCCACCGGACCAGCAGCGTTTGATCTTCGCCGGAAAG 20750
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406
||| | || ||| |||||| | || || ||||||||||| ||
Sbjct 20751 CAGCTTGAAGATGGCCGCACTCTGTCGGACTACAACATTCAGAA 20794
>seq12
Length=397188
Score = 87.8 bits (96), Expect = 2e-12
Identities = 101/136 (74%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 22311 AGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGA 22370
|||||||||||| || ||||| || || || || || || || |||||||| ||| | ||
Sbjct 53310 AGACAAGGAGGGGATCCCACCGGACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGA 53251
Query 22371 GGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTAGTTTT 22430
|||| ||||||| |||| || |||||||| || || || |||| | ||| | || |
Sbjct 53250 GGATGGCCGCACCCTCTCGGACTACAACATCCAGAAGGAGAGCACCCTCCATCTCGTCCT 53191
Query 22431 GCGATTGCGCGGAGGT 22446
|| |||| || |||
Sbjct 53190 CCGTCTGCGTGGTGGT 53175
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419725488321415
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |