Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09- 23] 491 sequences; 33,245,410 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq25 96.9 3e-15 seq64 89.7 4e-13 >seq25 Length=313491 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 || ||||| || | ||| || || || | ||||| || || || |||||||| || Sbjct 101236 CCACCACGCAGGCGCAACACCAAGTGCAGGGTAGACTCCTTCTGGATGTTGTAGTCTGAA 101295 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | || || ||| || || || ||||||||| ||||||||||||| ||||| || || Sbjct 101296 AGTGTCCGGCCATCCTCGAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGTGGG 101355 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335 ||||| || || || |||||| || | | || | ||||| | ||||| || Sbjct 101356 ATGCCCTCCTTATCTTGAATCTTCGACTTAACGTTGTCGATAGTGTCTGAAGATTCCACC 101415 Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || | || | || |||||||| || || || ||||| || |||||| Sbjct 101416 TCGAGTGTAATTGTCTTGCCGGTAAGTGTCTTCACAAATATTTGCATG 101463 >seq64 Length=168546 Score = 89.7 bits (98), Expect = 4e-13 Identities = 127/179 (71%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 114195 TTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATG 114254 || ||||||||||| || || ||| || ||||||||| || || || ||| |||| Sbjct 20794 TTCTGAATGTTGTAGTCCGACAGAGTGCGGCCATCTTCAAGCTGCTTTCCGGCGAAGATC 20735 Query 114255 AGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCA 114314 | |||||| |||||||| |||||||| || ||||| ||||| || | | || Sbjct 20734 AAACGCTGCTGGTCCGGTGGAATGCCCTCCTTGTCTTGGATCTTGCTCTTGACATTGTCG 20675 Query 114315 ACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 114373 | ||||||| | || ||||| || | || | || ||||| || || || ||||| || Sbjct 20674 ATGGTGTCGCTAGACTCGACTTCGAGCGTGATGGTCTTGCCAGTGAGGGTCTTTACGAA 20616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420131885889492