Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09- 23] 491 sequences; 33,245,410 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq31 284 2e-71 seq8 187 5e-42 >seq31 Length=267444 Score = 284 bits (314), Expect = 2e-71 Identities = 577/850 (68%), Gaps = 10/850 (1%) Strand=Plus/Plus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| |||||||||||||| || || ||||||||| ||||||||||| ||| Sbjct 238150 ATCTGGCAGATGTACAAGAAGGCCGAGGCATCGTTCTGGACCGCAGAGGAGATTGATCTG 238209 Query 42360 GCCAAGGACACGGCCGGCTGGGA---GTCACTGTCTGAGAACGAAAAGTTTTTCCTCAAA 42416 ||||||| | || ||| | | ||| ||| |||| || ||| || | Sbjct 238210 TCCAAGGATCTGCACGATTGGAACAAGCGACTCAATGATGACGAGCGATTCTTCATCTCA 238269 Query 42417 AACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGG 42476 || | || || |||||||| || || |||||||| ||||| |||||||| | | | Sbjct 238270 CACGTTCTCGCTTTCTTCGCAGCATCAGACGGCATTGTCAACGAGAACCTTGTCGAGCGC 238329 Query 42477 TTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATA 42536 |||| ||||| ||| | ||||| || |||||||| || |||||||| || Sbjct 238330 TTCAGCTCTGAGGTTCAGATCCCAGAGGCACGATGCTTCTATGGTTTCCAGATCATGATG 238389 Query 42537 GAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTC 42596 |||||| | ||||| || ||| || || | |||| || ||| || || Sbjct 238390 GAGAACATCCACTCCGAAACATACTCCCTCCTTATTGACACATATATCAGCGAGCCAAAG 238449 Query 42597 GAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGAC 42656 |||| | |||||||| ||||| || | || || |||||| |||||||| ||| Sbjct 238450 CAGCGAACATATCTGTTCAACGCCATCGATAACATCCCGTGCATCCGTAAGAAGGCTGAC 238509 Query 42657 TGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTT 42716 |||||| | |||||| | | | || |||| | | |||| || || Sbjct 238510 TGGGCGTTGCGATGGATCTCGGACAAAAATTCCACATTCGCCCTCCGATTGGTTGCTTTC 238569 Query 42717 ACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG 42776 |||| || ||||| |||||||| || || |||||||| ||||||||||||| ||| || Sbjct 238570 GCCGCTGTTGAGGGTATCTTCTTTTCCGGTTCCTTCGCCGCCATCTTCTGGCTGAAGAAG 238629 Query 42777 -AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCT 42835 ||| || ||| | || || || ||||||||||| || ||| | | || ||||| | Sbjct 238630 CGTGGTCTC-ATGGCTGGCCTTACATTCTCGAACGAGCTTATCTCCCGTGATGAGGGTAT 238688 Query 42836 GCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGA 42895 ||| | ||||| ||||| |||||||||||| ||| | | | ||||||| ||| Sbjct 238689 GCACACAGACTTCGCCTGTCTCCTGTTCTCG---CACTTGAAGAACAAGCCAGATCAGGC 238745 Query 42896 GCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTC 42955 | || | | ||||||| ||||| || | || ||| ||||||||||||| | | Sbjct 238746 ACTTGTGCAGAGCATCATCGTTGAGGCAGTTGCTATTGAGCAGGAGTTCCTCACAGATGC 238805 Query 42956 GCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGT 43015 ||||| || ||||||||||| | ||||||| | |||||| ||| ||| Sbjct 238806 TCTGCCATGCAAGCTTCTCGGCATGAACGCTGGTCTCATGTCACAATACATCGAGTTCGT 238865 Query 43016 CGCCGACCATCT-CCTGTGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTGCCCCT 43074 ||||||| || | | || || | || || |||||||| | | ||| | Sbjct 238866 GGCCGACCGCCTGCTTTTGGCA-CTCGGCAACAAGAAGTTCTACAACGCCACCAACCCAT 238924 Query 43075 TCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCG 43134 ||||||| |||||||||||||| ||| |||||||||||||| ||||||||||| || | Sbjct 238925 TCGACTTCATGGAGAACATCTCACTGGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTG 238984 Query 43135 CCGACTACCA 43144 ||| ||||| Sbjct 238985 GCGAGTACCA 238994 >seq8 Length=557162 Score = 187 bits (206), Expect = 5e-42 Identities = 1005/1589 (63%), Gaps = 58/1589 (4%) Strand=Plus/Plus Query 244090 GTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGG 244149 ||| || ||||| ||||| || | || || || || ||||| |||||| || || Sbjct 459196 GTTGACGACCTGGAACTCGCCGGCCAAGACACGACGGGAGTAGATGTTGCTCGTGTATGG 459255 Query 244150 CTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACAC 244209 ||||| || ||| || ||||| ||||| | || || || ||||| || | || Sbjct 459256 CTCGAAGCACTCATTGAAGCCCATGATCTGTGAGGTCGATGCGGTAGGCATAGGTGCAAC 459315 Query 244210 CAGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCA 244269 ||||| ||| | ||| || ||| ||| | |||||||| ||||||||| Sbjct 459316 AAGCAGCGAGTTGCGCACACCATGCTGAGCGATCTTGGCCTTGAGCTCGGCCCAGTCCCA 459375 Query 244270 CATGCCCG-AGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGC 244328 || | | | || ||| | |||||||||||| |||| ||| | |||||| Sbjct 459376 CAGGTCTGTAGGAGTCTT----------GCCCCACATGTCGTACTGAAGCT-CGCCTTGC 459424 Query 244329 TG-ACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTC 244387 || || ||||| ||| ||| ||| ||||| || ||| |||| || Sbjct 459425 GATACTGGAGAGCCCTGGTAAGTCTCGTATGGACCAAGCTTCTCGGCAAGCTCGCACGAA 459484 Query 244388 TCGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTG 244447 | || || ||||| | |||||||||||||||||| |||| | || ||||| | Sbjct 459485 GCCTCAAGAGCGGCATGGTAGATGGTCTCGAAGATATGGATGTTGAGCTCCTTGGCCTCG 459544 Query 244448 CCGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATG 244507 || ||| || || | | || ||| | || || || || | || || | Sbjct 459545 GGCGAGTCGAATGGCATACGGAGGGCCAAGAAAGCATCAGCAAGACCGTTGACACCCAGA 459604 Query 244508 CCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCG 244567 || || |||| ||| || |||| | || || || || |||||| ||||| Sbjct 459605 CCAATAGGTCGGTGACGGAAGTTGCTCTTCCGTGCCTCTGGTACTGGGTAATAGTTGATC 459664 Query 244568 TCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAG 244627 ||||| |||||| | |||||| |||| | | ||| ||| ||| || ||| Sbjct 459665 TCGATGGTCTTGTTCAAGTTGCGAGTGACAACCTTGGTGACCTCGTGAAGCTTCTTGAAG 459724 Query 244628 TCGTACTCGTAGGGATCCTCGG---CGATGGTGATCCTCACAAACTCGTTGAGGGCGACG 244684 ||| | | ||||| ||||| | | | | | ||| || || | Sbjct 459725 TCGAA---------AACCTCGTTTTCGATG-TCAACGT----ATGTCGGC-AGAGCAAGC 459769 Query 244685 CTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAG 244744 ||||| ||||||||| || ||||| || | | ||||| | || || ||||| Sbjct 459770 GAGGCCAAGTTGCAGACAGCGACCTCATCTGGTGCAGAGTACTCCATGATTTCAGTGCAC 459829 Query 244745 AGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCC 244804 | ||| | ||||||||||| |||| || || ||| |||| |||| ||| ||| Sbjct 459830 AAGTTCGAACTTTTGATGGTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTGGCGGCATCC 459889 Query 244805 TTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGG 244864 ||||| || ||||| || || |||||| |||||| | || | | ||||| Sbjct 459890 TTGTACAGGATGAAAGGTGTGCCAGTCTCGGTCTGGGCTTCAAGAATTGCATACCAGATC 459949 Query 244865 TCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCC 244924 | | || || ||| ||| |||| || ||| ||| || || ||| || || Sbjct 459950 TTCTGGGCGCGAACGGTCTCACGACCCTTACCTTCTCTCTCATATCGCTCGTAGAGCTCC 460009 Query 244925 TCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTC 244984 | |||||| || |||| || | ||| |||||| |||||||| || || Sbjct 460010 TTGAACTCATCACCGTAGACGTCAGACAAGCCAGGGCACTCATTGGGGCACATCAGGGTC 460069 Query 244985 CACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAG 245044 || |||| | || ||| | || ||||||||| || |||||||| ||||| | |||| Sbjct 460070 CAAGTGCCGTTCTGCTCGACGCGCTCCATGAAGAGATCTGGGATCCAAAGGGCGTAGAAG 460129 Query 245045 AGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAG 245104 || || | | | || ||| ||| |||||| | || |||| || | |||| Sbjct 460130 AGATCGCGAGCACGGACTTCCTCCTTGCCGTGGTTCTTACGGAGGTCCATGAACTGAAAG 460189 Query 245105 ACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCC 245164 || ||| ||||||| ||||| | ||||| || | ||| || || ||||||||||| ||| Sbjct 460190 ACATCGGCGTGCCATGGCTCAAGGTAGATGGCAAAGGCACCTGGGCGCTTGTTGCCACCC 460249 Query 245165 TGGTCCACCATCCTCTCGAGC----GCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTT 245220 ||||| | | | ||||| |||| | | | || | || || | ||||| Sbjct 460250 TGGTCGA----CGTAGCGAGCAGTGTTGTTGTACACTCTCAACATCGGTACAAGACCGTT 460305 Query 245221 AGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACAT 245280 || |||||||||||| ||| |||| || | | | || ||| || |||| Sbjct 460306 GGATGTGCCGTTGGTGCCACCGATATAGGAACCAGTAGCACGGATATTG----TGAACAT 460361 Query 245281 G----CCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTA 245336 | || | ||||| |||| ||||||||| | || || |||||| |||||| | Sbjct 460362 GCAGACCAATACCGCCAGCGTTCTTGGAGATCATAGCACATGTCTTGAGGGTGTCGTAGA 460421 Query 245337 TGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTG- 245395 |||| || |||||||| ||||||| | || |||||||| | || || ||||||| Sbjct 460422 TGCCGTCGATGCTGTCATCCTTCATGGCAATCAAGAAGCAGGAAGCCAACT-GGGCTTGC 460480 Query 245396 GGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGAGAGGAAC 245455 || | | | | |||| || || || || || || ||||| ||| | | | Sbjct 460481 GGTGTTCCAGCGCTGAAAAGCGTTGGCGACGCATGTGTGAAGTACTTCAGCGACATGTAG 460540 Query 245456 CCGTACGTCTGGAGCAGAGCGTCGATGTTGTCGCCGTGGAT-CTGCAGGGCGCACCTCAT 245514 ||| |||| | | ||| || || | || |||||||| | | | | || | ||| Sbjct 460541 TTGTATGTCTCAATCGCAGCCTCAATATCTTCTCCGTGGATACCGACCGCCACA-CGCAT 460599 Query 245515 GAGGGTGTGCTGGGGCGTCTCGATGGGTCCCTCGGGTCCCT--TGAGCATGTAGGAGCGC 245572 || | ||||| | ||||| | | || | ||| | |||| | ||| || ||| Sbjct 460600 GATCATCTGCTGCG--GTCTCTCAGCGACCTTGCCGTCGATTCTGAGAAGGTATGATCGC 460657 Query 245573 TCGAGCGTCTTGAACCCAAAGTACGAGTAGCCAAAGTCGGCGTGGTGCCTGACGGCTGCG 245632 || || |||||||| || |||||| |||| |||||| || || | ||| | | Sbjct 460658 TCCAGAGTCTTGAAGCCGAAGTACTGGTAGTTGAAGTCGCGGTCGTAGACAATGGCCGAG 460717 Query 245633 TCGAGTCTC-TCGGCGTGCTTC-TGACTG 245659 | ||| ||| || | ||||||| |||||| Sbjct 460718 TTGAG-CTCGTCCGAGTGCTTCATGACTG 460745 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944333404118160