Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09-
23] 491 sequences; 33,245,410 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq25 136 9e-27
seq64 104 6e-17
seq31 87.8 4e-12
>seq25
Length=313491
Score = 136 bits (150), Expect = 9e-27
Identities = 170/232 (73%), Gaps = 1/232 (0%)
Strand=Plus/Plus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| ||||| ||||| | || || || || | |||| ||| || ||||| || ||||
Sbjct 101460 CATG-CCACCACGGAGGCGGAGCACAAGGTGTAGCGTGGATTCCTTCTGGATGTTGTAGT 101518
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
|| ||| ||||| || || || | || || || ||||||||||| ||||| ||
Sbjct 101519 CGCTGAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGG 101578
Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421
|||||| || || || ||||| || |||| || ||||| || || | || ||| |
Sbjct 101579 GTGGGATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCAATCGTGTCCGACGACT 101638
Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
| || ||||| ||||| ||||| ||||||| ||||||||||| ||||||||
Sbjct 101639 CAACCTCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 101690
>seq64
Length=168546
Score = 104 bits (114), Expect = 6e-17
Identities = 141/194 (73%), Gaps = 2/194 (1%)
Strand=Plus/Minus
Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345
|| || || || ||||| | || ||||| || ||||| | || ||||| |||||||||
Sbjct 20794 TTCTGAATGTTGTAGTCCGACAGAGTGCGGCCATCTTCAAGCTGCTTTCCGGCGAAGATC 20735
Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTC 288404
| |||||| || ||| || || || || || ||||| || ||| || || || ||
Sbjct 20734 AAACGCTGCTGGTCCGGTGGAATGCCCTCCTTGTCTTGGATCTT-GCTCTTGACATTGTC 20676
Query 288405 TATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464
|| | ||||| || || |||||||||||||| ||||| || || || ||||| |||||
Sbjct 20675 GATGGTGTCGCTAGACTCGACTTCGAGCGTGATGGTCTTGCCAGTGAGGGTCTTTACGAA 20616
Query 288465 TATCTGCATTATGT 288478
| ||| |||||
Sbjct 20615 GCTGTGCGATATGT 20602
>seq31
Length=267444
Score = 87.8 bits (96), Expect = 4e-12
Identities = 123/173 (71%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 269153 TCGGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTCA 269212
|||| ||||| || | ||||||| ||||| ||||| |||||||| || || | |
Sbjct 238823 TCGGCATGAACGCTGGTCTCATGTCACAATACATCGAGTTCGTGGCCGACCGCCTGCTTT 238882
Query 269213 CGGCACTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAACTAA 269272
||||||||| | |||| | ||||| | | || || |||| ||| ||||| |
Sbjct 238883 TGGCACTCGGCAACAAGAAGTTCTACAACGCCACCAACCCATTCGACTTCATGGAGAACA 238942
Query 269273 TTTCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTCAGCGACTATCAA 269325
| || || | || ||||| ||||||||||| |||||||| |||| || |||
Sbjct 238943 TCTCACTGGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGCGAGTACCAA 238995
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179646978867898
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |