Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09-
23] 491 sequences; 33,245,410 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq31 145 2e-29
>seq31
Length=267444
Score = 145 bits (160), Expect = 2e-29
Identities = 564/875 (64%), Gaps = 25/875 (3%)
Strand=Plus/Plus
Query 242896 ATGTGGGATATGTATAAGAAGGCAGTGGCAACCTTTTGGACCACCGAGGAAGTTCCTCTG 242955
|| ||| | ||||| |||||||| | |||| | || |||||| | ||||| || ||||
Sbjct 238150 ATCTGGCAGATGTACAAGAAGGCCGAGGCATCGTTCTGGACCGCAGAGGAGATTGATCTG 238209
Query 242956 AACGCAGACGTCGTCGACTGGCGCGAGAAACTCAATGACGACGAACGTCATTTCATCAAA 243015
| || | ||| ||| | || ||||||||| ||||| || |||||| |
Sbjct 238210 TCCAAGGATCTGCACGATTGGAACAAGCGACTCAATGATGACGAGCGATTCTTCATCTCA 238269
Query 243016 CACATTCTAGGTTTTTTCGCAGGCTCCGATGGTATTGTGATGGAAAATCT-GCAGACCAA 243074
||| |||| | ||| ||||||| || || || ||||| | || || || | || |
Sbjct 238270 CACGTTCTCGCTTTCTTCGCAGCATCAGACGGCATTGTCAACGAGAACCTTGTCGAGCG- 238328
Query 243075 CTTTAGTGTGGAAGTAACGGTTCCAGAGGCACGGCAATTTTATGCTTACCAAACATTCAA 243134
||| || || || | | ||||||||||| || |||| || ||| | | |
Sbjct 238329 CTTCAGCTCTGAGGTTCAGATCCCAGAGGCACGATGCTTCTATGGTTTCCAGATCATGAT 238388
Query 243135 CGAATCTATCCATTCTGAACAATATGCTCTTCTTATCGACGCGCTTATTTCAGATGAAC- 243193
|| ||||| || ||| ||| | || ||||| ||| | ||| |||| || |
Sbjct 238389 GGAGAACATCCACTCCGAAACATACTCCCTCCTTATTGACACA--TATATCAGC-GAGCC 238445
Query 243194 -AAG-AGCGAAACGAGCTTTTCGACGCCATCGAAAACATTCCGGCGGTTCATAACAAGGC 243251
||| |||||| | || ||| |||||||||| ||||| ||| | | ||| |||||
Sbjct 238446 AAAGCAGCGAACATATCTGTTCAACGCCATCGATAACATCCCGTGCATCCGTAAGAAGGC 238505
Query 243252 AAAATGGGCTCAGAAGTGGCTA--GAACCCGGT---AAAT----CATTTGCTGAGCGTCT 243302
| ||||| || || | || | ||| |||| |||| || || |
Sbjct 238506 TGACTGGGC------GTTGCGATGGATCTCGGACAAAAATTCCACATTCGCCCTCCGATT 238559
Query 243303 CGTCGCCTGGGTGTGCGTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCGCCATCTTTTG 243362
|| || | | ||||| ||||| | |||||||| ||| ||||||||| ||
Sbjct 238560 GGTTGCTTTCGCCGCTGTTGAGGGTATCTTCTTTTCCGGTTCCTTCGCCGCCATCTTCTG 238619
Query 243363 GCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCATCAGTCGCGA 243422
|||| ||| ||| | ||| ||||||| | || |||||| | ||| || ||
Sbjct 238620 GCTGAAGAAGCGTGGTCTCATGGCTGGCCTTACATTCTCGAACGAGCTTATCTCCCGTGA 238679
Query 243423 CGAGGGCCTTCACCAACAGTTCGGTGAGCTTATGTATTCAAAGCTCCAGAACAAGCTACC 243482
||||| | ||| | | |||| || ||| || | | ||||||||| |
Sbjct 238680 TGAGGGTATGCACACAGACTTCGCCTGTCTCCTGTTCTCGCACTTGAAGAACAAGCCAG- 238738
Query 243483 ATTCGAAACG-GTCAAACAAATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTT 243541
|| | || || | |||||| || ||||||| | || |||| ||| |
Sbjct 238739 ATCAGGCACTTGTGCAGAGCATCATCGTTGAGGCAGTTGCTATTGAGCAGGAGTTCCTCA 238798
Query 243542 GCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCG 243601
|| ||| | |||||| |||| | ||||||||| ||| |||||| ||| |||||||
Sbjct 238799 CAGATGCTCTGCCATGCAAGCTTCTCGGCATGAACGCTGGTCTCATGTCACAATACATCG 238858
Query 243602 AATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGA 243661
| ||||| ||||||||| | | | || || || | |||| | |||||| ||| |
Sbjct 238859 AGTTCGTGGCCGACCGCCTGCTTTTGGCACTCGGCAACAAGAAGTTCTACAACGCCACCA 238918
Query 243662 ACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGC 243721
|||| || | ||| |||||| ||| || || || || || ||||||||||| ||||
Sbjct 238919 ACCCATTCGACTTCATGGAGAACATCTCACTGGGCGGCAAGACCAACTTCTTCGAGAAGC 238978
Query 243722 GTGTCAGTGATTATCAACGCCCTGGTGTGATGAAA 243756
|||| | || || ||| | ||||| ||| ||
Sbjct 238979 GTGTTGGCGAGTACCAAAAGGCGGGTGTCATGGAA 239013
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102873061850850
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |