Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09- 23] 491 sequences; 33,245,410 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq8 212 7e-50 seq31 127 2e-24 >seq8 Length=557162 Score = 212 bits (234), Expect = 7e-50 Identities = 1126/1770 (64%), Gaps = 49/1770 (3%) Strand=Plus/Plus Query 113565 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 113624 ||||||| || ||| || | || | || || ||||||||||| || |||||||| | Sbjct 458859 TGAACTGGATAGGTGCCGACGCAGCTTGTGTACGAAGGTAGTACATGCCAGTCTTGAGAC 458918 Query 113625 CCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACTTTCCATGA 113684 | ||||||| || | |||||| | | |||| | ||||| | |||| Sbjct 458919 CAAGCTTCCAACCAGCGAAATGCATGCTCGTGATCTTGCCCATGGTTGGCTCCTTCATGT 458978 Query 113685 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATATCAATCA 113744 || |||| || || || |||||||||||| ||||| || || ||||| | | | Sbjct 458979 GGATATTCAAGCTCTGAGACTGATCGATGAAGGCACCACGGTCAGCAGCCATCTGGACGA 459038 Query 113745 CATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATAT 113804 | | |||| ||||| || || |||| || ||| | ||||||||||| | Sbjct 459039 TGTTACGCTGGCTGATCTCCCAGACGGTCTTGTAAAGTGCCTTGAGGTCATCTGGGATGT 459098 Query 113805 CCACGATATTTTGGATGGAGCC---ACCCGCCTTGACCATGAGATCCTTCATATCCTTTG 113861 || |||||||| || | | || ||| || | | |||||| | || | Sbjct 459099 TGGGAATGCGCTGGATGGAACCGTTATCGGCAATGA---TGCGGTTCTTCATGTTCTCAG 459155 Query 113862 ACCAGAGACCAATCTTTTTGAGATCCTCCACGAG--ATGCTTATTGACAACAACAAACTC 113919 |||| |||||| | ||||||| || || ||| | |||| || ||||| Sbjct 459156 ACCACAGACCACGGTCGACAAGATCCTTCAGCAGCCATGGGT--TGACGACCTGGAACTC 459213 Query 113920 ACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTT 113979 || || | | || | ||||| ||| ||||||||||||| |||||||||||| Sbjct 459214 GCCGGCCAAGACACGACGGGAGTAGATGTTGCTCGTGTATGGCTCGAAGCACTCATTGAA 459273 Query 113980 ACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAG 114039 |||| ||| || | ||| || || || ||||| ||||| | || || ||| || | Sbjct 459274 GCCCATGATCTGTGAGGTCGATGCGGTAGGCATAGGTGCAACAAGCAGCGAGTTGCGCAC 459333 Query 114040 ACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTT----GTCT 114095 ||| | | || ||||||| || ||||||| | | || | |||| Sbjct 459334 ACCATGCTGAGCGATCTTGGCCTTGAGCTCGGCCCAGTCCCACAGGT-CTGTAGGAGTCT 459392 Query 114096 CCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCT 114155 ||| ||||| || |||| || ||||| || |||| || |||| | |||| Sbjct 459393 TGCCC---CACATGTCGTACTGAAGCTCGCCTTGCGATACTGGAGAGCCCTGGTAAGTCT 459449 Query 114156 CGTATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTG 114215 ||||||| || ||| || | ||| | ||||| || || || || || || | Sbjct 459450 CGTATGGACCAAGCTTCTCGGCAAGCTCGCACGAAGCCTCAAGAGCGGCATGGTAGATGG 459509 Query 114216 TCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACA 114275 |||| || || | || | ||||||||||| || || || | | ||| Sbjct 459510 TCTCGAAGATATGGATGTTGAGCTCCTTGGCCTCGGGCGAGTCGAATGGCATACGGAGGG 459569 Query 114276 AAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAG 114335 | || |||| || ||||| | |||||| || ||||| || || || | | || Sbjct 459570 CCAAGAAAGCATCAGCAAGACCGTTGACACCCAGACCAATAGGTCGGTGACGGAAGTTGC 459629 Query 114336 ACTTTCGAGCGGTCTCC-ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTG 114394 ||| || || ||| || || ||| | || | ||||| | | || | || Sbjct 459630 TCTTCCGTGCC-TCTGGTACTGGGTAATAGTTGATCTCGATGGTCTTGTTCAAGTTGCGA 459688 Query 114395 GTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATC-AAAACTGCGAGTCTCTTCATT 114453 ||||||||||| |||| || |||||||| | | | || ||||| || | ||| | Sbjct 459689 GTGACAACCTTGGTGACCTCGTGAAGCTTCTTGAAGTCGAAAACCTCG----TTTTCGAT 459744 Query 114454 GACA---TACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATC 114510 | || || | || || || | || |||| || || |||| | |||||| | Sbjct 459745 GTCAACGTATGTCGGCAGAGCAAGCGAGGCCAAGTTGCAGACAGCGACCTCATCTGGTGC 459804 Query 114511 AGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTG 114570 || |||||| || ||||| || ||||| || ||||| || |||||||| | |||||| || Sbjct 459805 AGAGTACTCCATGATTTCAGTGCACAAGTTCGAACTTTTGATGGTGCCAAGGTTCTTCTG 459864 Query 114571 ATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTG 114630 || ||| ||| ||||||||||| || ||| | || || || ||||| || || Sbjct 459865 GTTGCTCTTGCGGTTGGCGGCATCCTTGTACAGGATGAAAGGTGTGCCAGTCTCGGTCTG 459924 Query 114631 GGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCT 114689 || | ||||| || | ||||| | || | ||| | || || | | | | ||| Sbjct 459925 GGCTTCAAGAATTGCATACCAGATCTTCTG-GGCGCGAACGGTCTC-ACGACCCTTACCT 459982 Query 114690 CCTC-CTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCT 114748 ||| ||| || |||||| | | ||||| ||||| | | || || | || Sbjct 459983 TCTCTCTCATATCGCTCGTAGAGCTCCTTGAACTCATCACCGTAGACGTCAGACAAGCCA 460042 Query 114749 GGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAG 114808 || || || ||||| | || | ||| || || ||| || |||| ||||||| Sbjct 460043 GGGCACTCATTGGGGCACATCAGGGTCCAAGTGCCGTTCTGCTCGACGCGCTCCATGAAG 460102 Query 114809 AGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGA 114868 || ||||||||||| || || |||||||||| ||| || |||| || | || || Sbjct 460103 AGATCTGGGATCCAAAGGGCGTAGAAGAGATCGCGAGCACGGACTTCCTCCTTGCCGTGG 460162 Query 114869 TTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCG 114928 || ||| | |||| || | | || ||| |||||||| || || ||||| | || Sbjct 460163 TTCTTACGGAGGTCCATGAACTGAAAGACATCGGCGTGCCATGGCTCAAGGTAGATGGC- 460221 Query 114929 ATTGACCCCTTACGACG------ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAAT 114982 | | | ||| | || ||| |||||| || || | || ||| || | Sbjct 460222 AAAGGCACCT--GGGCGCTTGTTGCCACCCTGGTCGACGTAGCGAGCAGTGTTGTTGTAC 460279 Query 114983 ACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACT 115040 || | | ||| || | | ||| | ||| ||| || || || |||| ||| || || Sbjct 460280 ACTCTCAACATCGGTACAAGACCGTTGGATGTGCCGTTGGTGCCACCGATATAGGA-AC- 460337 Query 115041 TATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCG 115100 | | || | || || || | |||| ||||||||| || || ||| ||||| | Sbjct 460338 CAGTAGCACGGATATTGTGAACATGCAGACCAATACCGCCAGCGTTCTTGGAGATCATAG 460397 Query 115101 CGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGA 115160 | || | |||| || ||||||| |||||||| |||| |||| | || || | || Sbjct 460398 CACATGTCTTGAGGGTGTCGTAGATGCCGTCGATGCTGTCATCCTTCATGGCAATCAAGA 460457 Query 115161 AGCAGCTCGACATTTGTGGCCT-TGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGG 115219 ||||| | || || ||| | ||||| |||||| |||| || ||||| | ||| || Sbjct 460458 AGCAGGAAGCCAACTG-GGCTTGCGGTGTTCCAGCGCTGAAAAGCGTTGGCGACGCATGT 460516 Query 115220 ATGAACATACCT-TGGGACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCC 115278 |||| ||| | | ||||| | | ||| ||||| | | || ||| ||||| || Sbjct 460517 GTGAA-GTACTTCAGCGACATGTAGTTGTATGTCTCAATCGCAGCCTCAATATCTTCTCC 460575 Query 115279 GTGAATACCGATCGAGACCCGCATAAACAT 115308 ||| ||||||| || || ||||| | ||| Sbjct 460576 GTGGATACCGACCGCCACACGCATGATCAT 460605 >seq31 Length=267444 Score = 127 bits (140), Expect = 2e-24 Identities = 299/447 (67%), Gaps = 32/447 (7%) Strand=Plus/Minus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817 ||| || ||||| ||||||||||||||||| ||||| ||| ||| ||| |||||||| Sbjct 238992 GTACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGTGAGATGTTCTCCAT 238933 Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGTTGGCACC--CCAATCTGTTTGA 125870 || || |||||||| | | ||| | | |||||| | |||| | Sbjct 238932 GAAGTCGAATGGGTTGGTGGCGTTGTAGAACTTCTTGTTGCCGAGTGCCAAA-------A 238880 Query 125871 GGAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGA 125930 | || || || | ||| |||| ||||| | ||||| ||| |||||| |||| | Sbjct 238879 GCAGGCGGTCGGCCACGAACTCGATGTATTGTGACATGAGACCAGCGTTCATGCCGAGAA 238820 Query 125931 GGTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGA 125990 | || ||||| || || || || |||| ||| |||||| | || || || |||| Sbjct 238819 GCTTGCATGGCAGAGCATCTGTGAGGAACTCCTGCTCAATAGCAACTGCCTCA---ACGA 238763 Query 125991 TGGCGTGAATGGTGTCCACC----CCAGGTCTA--TTGCGCA--AAGT-CTTGAAGAGTT 126041 || ||| | | ||| || | ||| ||| | |||| | ||| || Sbjct 238762 TG------ATGCTCTGCACAAGTGCCTGATCTGGCTTGTTCTTCAAGTGCGAGAACAGGA 238709 Query 126042 CCACGGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACA 126101 ||| || ||| ||| | |||||| ||||||||||| || || |||||||| | Sbjct 238708 GACAGGCGAAGTCTGTGTGCATACCCTCATCACGGGAGATAAGCTCGTTCGAGAATGTAA 238649 Query 126102 GTCCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGA 126161 | || | ||||||||| |||||||||| |||||| || || || ||||| || |||| Sbjct 238648 GGCCAGCCATGAGACCACGCTTCTTCAGCCAGAAGATGGCGGCGAAGGAACCGGAAAAGA 238589 Query 126162 AGATTCCCTCCACACACGCGAACGCAA 126188 |||| ||||| ||| ||||| |||| Sbjct 238588 AGATACCCTCAACAGCGGCGAAAGCAA 238562 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597349933742280