Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09- 23] 491 sequences; 33,245,410 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq25 131 2e-25 seq64 116 4e-21 >seq25 Length=313491 Score = 131 bits (144), Expect = 2e-25 Identities = 160/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 41994 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 42053 ||||||||||| |||| || |||||| || || ||||| || | || ||||| | Sbjct 101248 CGCAACACCAAGTGCAGGGTAGACTCCTTCTGGATGTTGTAGTCTGAAAGTGTCCGGCCA 101307 Query 42054 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTG 42113 || || ||||||||||||||||| ||||| ||||||||||| | ||| | || |||||| Sbjct 101308 TCCTCGAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTA 101367 Query 42114 TCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGAT 42172 | | ||| | || | | | ||| | | | ||||| |||||||| |||| || || Sbjct 101368 T-CTTGAATCTTCGACTTAACGTTGTCGATAGTGTCTGAAGATTCCACCTCGAGTGTAAT 101426 Query 42173 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || ||||| || || ||||| ||||| |||||||| Sbjct 101427 TGTCTTGCCGGTAAGTGTCTTCACAAATATTTGCAT 101462 Score = 104 bits (114), Expect = 3e-17 Identities = 142/193 (74%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| || || ||||| || || || || | || || |||||||| || ||||| Sbjct 101500 TCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAG 101559 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 42136 || || ||||||||||||| ||| | || |||||||||| ||| | || | |||| ||| Sbjct 101560 ATCAGGCGCTGCTGGTCGGGTGGGATGCCCTCCTTGTCC-TGAATCTTCGACTTGA-CGT 101617 Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | |||||| ||| || || |||| |||||||| ||||| || | ||||| | Sbjct 101618 TGTCAATCGTGTCCGACGACTCAACCTCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTGA 101677 Query 42196 CAAAGATTTGCAT 42208 | ||||| ||||| Sbjct 101678 CGAAGATCTGCAT 101690 >seq64 Length=168546 Score = 116 bits (128), Expect = 4e-21 Identities = 142/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 42013 TGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAG 42072 ||| | |||| ||||| ||||| || | |||||| || | || || |||||||| || | Sbjct 20802 TGCGCACCTTCTGAATGTTGTAGTCCGACAGAGTGCGGCCATCTTCAAGCTGCTTTCCGG 20743 Query 42073 CGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGA 42132 |||| || | ||||||||||| | ||| | || ||||||||| ||| || |||| Sbjct 20742 CGAAGATCAAACGCTGCTGGTCCGGTGGAATGCCCTCCTTGTCTTGGATCTTGCTCTTGA 20683 Query 42133 GCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192 | | | |||||||| || || || |||| ||||||||| ||||| || || |||| Sbjct 20682 CATTGTCGATGGTGTCGCTAGACTCGACTTCGAGCGTGATGGTCTTGCCAGTGAGGGTCT 20623 Query 42193 TTACAAAGATTTGC 42206 |||| ||| | ||| Sbjct 20622 TTACGAAGCTGTGC 20609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543209466031440