Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09-
23] 491 sequences; 33,245,410 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq25 131 2e-25
seq64 116 4e-21
>seq25
Length=313491
Score = 131 bits (144), Expect = 2e-25
Identities = 160/216 (74%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 41994 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 42053
||||||||||| |||| || |||||| || || ||||| || | || ||||| |
Sbjct 101248 CGCAACACCAAGTGCAGGGTAGACTCCTTCTGGATGTTGTAGTCTGAAAGTGTCCGGCCA 101307
Query 42054 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTG 42113
|| || ||||||||||||||||| ||||| ||||||||||| | ||| | || ||||||
Sbjct 101308 TCCTCGAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTA 101367
Query 42114 TCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGAT 42172
| | ||| | || | | | ||| | | | ||||| |||||||| |||| || ||
Sbjct 101368 T-CTTGAATCTTCGACTTAACGTTGTCGATAGTGTCTGAAGATTCCACCTCGAGTGTAAT 101426
Query 42173 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| ||||| || || ||||| ||||| ||||||||
Sbjct 101427 TGTCTTGCCGGTAAGTGTCTTCACAAATATTTGCAT 101462
Score = 104 bits (114), Expect = 3e-17
Identities = 142/193 (74%), Gaps = 4/193 (2%)
Strand=Plus/Plus
Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077
||||| || || ||||| || || || || | || || |||||||| || |||||
Sbjct 101500 TCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAG 101559
Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 42136
|| || ||||||||||||| ||| | || |||||||||| ||| | || | |||| |||
Sbjct 101560 ATCAGGCGCTGCTGGTCGGGTGGGATGCCCTCCTTGTCC-TGAATCTTCGACTTGA-CGT 101617
Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195
| | | |||||| ||| || || |||| |||||||| ||||| || | ||||| |
Sbjct 101618 TGTCAATCGTGTCCGACGACTCAACCTCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTGA 101677
Query 42196 CAAAGATTTGCAT 42208
| ||||| |||||
Sbjct 101678 CGAAGATCTGCAT 101690
>seq64
Length=168546
Score = 116 bits (128), Expect = 4e-21
Identities = 142/194 (73%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 42013 TGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAG 42072
||| | |||| ||||| ||||| || | |||||| || | || || |||||||| || |
Sbjct 20802 TGCGCACCTTCTGAATGTTGTAGTCCGACAGAGTGCGGCCATCTTCAAGCTGCTTTCCGG 20743
Query 42073 CGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGA 42132
|||| || | ||||||||||| | ||| | || ||||||||| ||| || ||||
Sbjct 20742 CGAAGATCAAACGCTGCTGGTCCGGTGGAATGCCCTCCTTGTCTTGGATCTTGCTCTTGA 20683
Query 42133 GCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192
| | | |||||||| || || || |||| ||||||||| ||||| || || ||||
Sbjct 20682 CATTGTCGATGGTGTCGCTAGACTCGACTTCGAGCGTGATGGTCTTGCCAGTGAGGGTCT 20623
Query 42193 TTACAAAGATTTGC 42206
|||| ||| | |||
Sbjct 20622 TTACGAAGCTGTGC 20609
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543209466031440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |