Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09- 23] 491 sequences; 33,245,410 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq8 235 5e-57 >seq8 Length=557162 Score = 235 bits (260), Expect = 5e-57 Identities = 611/925 (66%), Gaps = 10/925 (1%) Strand=Plus/Minus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | ||||| | |||||| ||||||||| || ||||| |||| || || ||| Sbjct 460689 AACTACCAGTACTTCGGCTTCAAGACTCTGGAGCGATCATACCTTCTCAGAATCGACGGC 460630 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | ||| | ||| ||||||| ||| || | ||||| || || |||| || ||||| | Sbjct 460629 AAGGTCGCTGAGAGACCGCAGCAGATGATCATGCGTGTGGCGGTCGGTATCCACGGAGAA 460570 Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATAC-CATGGC 93893 || || | || | | | | || ||||| | ||| | || |||| | Sbjct 460569 GATATTGAGGCTGCGATTGAGACATACAACTACATGTCGCTGAAGTACTTCACACATG-C 460511 Query 93894 CACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT 93953 | || || || |||| ||| || || ||| | ||| || |||| || ||| |||| Sbjct 460510 GTCGCCAACGCTTTTCAGCGCTGGAACACCGCAAGCCCAGTTGGCTTCCTGCTTCTTGAT 460451 Query 93954 GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCAT 94013 | | |||| ||| |||| ||| || | ||||| ||||||| ||||| | || Sbjct 460450 TGCCATGAAGGATGACAGCATCGACGGCATCTACGACACCCTCAAGACATGTGCTATGAT 460391 Query 94014 CTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTA 94073 ||| || |||| || || || || | ||| ||| | | ||||| | |||||||| Sbjct 460390 CTCCAAGAACGCTGGCGGTATTGGTCTGCATGTTCACAATATCCGTGCTACTGGTTCCTA 460331 Query 94074 CATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAA 94133 ||| | || ||||| ||||| |||||||| || || || ||| | | || | |||||| Sbjct 460330 TATCGGTGGCACCAACGGCACATCCAACGGTCTTGTACCGATGTTGAGAGTGTACAACAA 460271 Query 94134 CGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCT 94193 | | || |||||||| ||||||||||| | | | ||| | || || |||| || Sbjct 460270 CACTGCTCGCTACGTCGACCAGGGTGGCAACAAGCGCCCAGGTGCCTTTGCCATCTACCT 460211 Query 94194 CGAGCCCTGGCACGCGGA---CGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAA 94250 ||||| |||||||| || | | ||| ||||| ||||| || |||||||||||||| Sbjct 460210 TGAGCCATGGCACGCCGATGTCTTTCAG---TTCATGGACCTCCGTAAGAACCACGGCAA 460154 Query 94251 CGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAA 94310 || | | || | || ||||||||||| || ||| | ||||| || || ||| | Sbjct 460153 GGAGGAAGTCCGTGCTCGCGATCTCTTCTACGCCCTTTGGATCCCAGATCTCTTCATGGA 460094 Query 94311 ACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTC 94370 ||||||||| | ||| | | |||| || | || |||||||| || || || |||| Sbjct 460093 GCGCGTCGAGCAGAACGGCACTTGGACCCTGATGTGCCCCAATGAGTGCCCTGGCTTGTC 460034 Query 94371 CGACGTTTGTGGATCGCGTTTTGAA-GACTTGTATGCTCGTTACGAATCGCAGGGCAAGG 94429 ||||| | || | | || || || | || | || || || | || |||| Sbjct 460033 TGACGTCTACGG-TGATGAGTTCAAGGAGCTCTACGAGCGATATGAGAGAGAAGGTAAGG 459975 Query 94430 CCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGA 94489 | || | || |||| | ||| || || | || | ||| |||| Sbjct 459974 GTCGTGAGACCGTTCGCGCCCAGAAGATCTGGTATGCAATTCTTGAAGCCCAGACCGAGA 459915 Query 94490 CGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACC 94549 | || || || | |||| ||| |||||| | | |||| |||| ||||||| || ||| Sbjct 459914 CTGGCACACCTTTCATCCTGTACAAGGATGCCGCCAACCGCAAGAGCAACCAGAAGAACC 459855 Query 94550 TCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACG 94609 | || ||||| || ||||| ||||||| || || | ||||| || | || || | Sbjct 459854 TTGGCACCATCAAAAGTTCGAACTTGTGCACTGAAATCATGGAGTACTCTGCACCAGATG 459795 Query 94610 AGATTGCTGTGTGTAACCTGGGCTC 94634 || | ||||| || ||| ||| ||| Sbjct 459794 AGGTCGCTGTCTGCAACTTGGCCTC 459770 Score = 100 bits (110), Expect = 3e-16 Identities = 202/297 (68%), Gaps = 2/297 (1%) Strand=Plus/Minus Query 95077 CACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATC 95136 || |||||| ||| |||||||||| || || ||||| || || || || | |||||| Sbjct 459339 CATGGTGTGCGCAACTCGCTGCTTGTTGCACCTATGCCTACCGCATCGACCTCACAGATC 459280 Query 95137 CTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTC 95196 | ||| ||| |||| ||||| || | ||| |||| | ||| | | || || | Sbjct 459279 ATGGGCTTCAATGAGTGCTTCGAGCCATACACGAGCAACATCTACTCCCGTCGTGTCTTG 459220 Query 95197 GCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCT-GACGTCTCTGGGTGT 95255 ||||| || |||| ||| ||||| || || ||| || | || | ||| | | Sbjct 459219 GCCGGCGAGTTCCAGGTCGTCAACCCATGGCTGCTGAAGGATCTTGTCGACCGTGG-TCT 459161 Query 95256 GTGGGGTGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCC 95315 |||| ||| || | ||||||| | | || ||||| ||| ||||| ||| || Sbjct 459160 GTGGTCTGAGAACATGAAGAACCGCATCATTGCCGATAACGGTTCCATCCAGCGCATTCC 459101 Query 95316 GCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCG 95372 | || || || ||| ||||||| || ||||||||||| ||||||||| ||||| Sbjct 459100 CAACATCCCAGATGACCTCAAGGCACTTTACAAGACCGTCTGGGAGATCAGCCAGCG 459044 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494720163636360