Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09-
23] 491 sequences; 33,245,410 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq31 154 1e-32
seq25 95.1 1e-14
seq64 82.4 8e-11
>seq31
Length=267444
Score = 154 bits (170), Expect = 1e-32
Identities = 361/536 (67%), Gaps = 9/536 (2%)
Strand=Plus/Plus
Query 52305 CTGCTGAATGCGTTCGAGCACGTGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAG 52364
||| | || || |||| || | |||||| | || || |||||| | ||||| ||
Sbjct 238462 CTGTTCAACGCCATCGATAACATCCCGTGCATCCGTAAGAAGGCTGACTGGGCGTTGCGA 238521
Query 52365 TGGATCGAGAGCGACACCGCCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAG 52424
|||||| | | | | |||| | ||| || |||| || |||||| || |||
Sbjct 238522 TGGATCTCGGACAAAAATTCCACATTCGCCCTCCGATTGGTTGCTTTCGCCGCTGTTGAG 238581
Query 52425 GGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATG 52484
|| | || |||||||| ||| ||||||||||| | | || | | || | |||
Sbjct 238582 GGTATCTTCTTTTCCGGTTCCTTCGCCGCCATCTTCTGGCTGAAGAAGCGTGGTCTCATG 238641
Query 52485 CCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTT 52544
| ||||| || ||| |||||| | || || || || || || ||||||| |||||
Sbjct 238642 GCTGGCCTTACATTCTCGAACGAGCTTATCTCCCGTGATGAGGGTATGCACACAGACTTC 238701
Query 52545 GCGTGCCTCTACTACAAGACGCGCGTGACCGAAAAATTGGATTCGGACACGA-TCCTGAG 52603
|| || ||| | | ||| | ||| | || ||| || ||| | | |||
Sbjct 238702 GCCTGTCTCCTGTTCT---CGCACTTGAAGAACAAGCCAGATCAGG-CACTTGTGCAGAG 238757
Query 52604 CATGTTCAAGGAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGA 52663
||| || ||||| || ||||| || ||||||| | || | || ||||| | |
Sbjct 238758 CATCATCGTTGAGGCAGTTGCTATTGAGCAGGAGTTCCTCACAGATGCTCTGCCATGCAA 238817
Query 52664 GCTGCTGGGCATGAACGCGCAGTC-CATGTGCGAGTACATCGAGTTTGTGGCGGATCGTC 52722
||| || ||||||||||| ||| ||||| | ||||||||||| ||||| || || |
Sbjct 238818 GCTTCTCGGCATGAACGC-TGGTCTCATGTCACAATACATCGAGTTCGTGGCCGACCGCC 238876
Query 52723 TGTTGGTGCAGCTCGGGCAGCCA-AAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATG 52781
|| | || ||| |||| | | |||| || |||||| ||| || || || || |||
Sbjct 238877 TGCTTTTGGCACTC-GGCAACAAGAAGTTCTACAACGCCACCAACCCATTCGACTTCATG 238935
Query 52782 AACAACATTTCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837
| ||||| || || | |||||||||||||| ||||||||||| || ||||||||
Sbjct 238936 GAGAACATCTCACTGGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGCGAGTA 238991
>seq25
Length=313491
Score = 95.1 bits (104), Expect = 1e-14
Identities = 125/171 (73%), Gaps = 2/171 (1%)
Strand=Plus/Plus
Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482
|||||| ||||||||||||||||| | || || |||||||| || || || | |
Sbjct 101727 CTCCTTCTGAATGTTGTAGTCGCTGAGGGTGCGACCATCCTCGAGCTGCTTGCCTGCGAA 101786
Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGAT-TTTTTGTTTTAATT 138541
||| | ||||| ||||||||||| ||||| || ||||| ||| || | ||| |||
Sbjct 101787 GATCAAGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCCTGGATCTTGCTCTTTACATT 101846
Query 138542 GTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCA 138592
| || | ||||| | ||||||||||||| || | || || |||||||
Sbjct 101847 G-TCAATCGTGTCAGAAGACTCCACCTCGAGGGTGATTGTCTTGCCAGTCA 101896
Score = 91.5 bits (100), Expect = 1e-13
Identities = 161/231 (70%), Gaps = 4/231 (2%)
Strand=Plus/Plus
Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446
||| || |||| ||||| || || || | | | |||||||| || |||||||||||
Sbjct 101235 GCCACCACGCAGGCGCAACACCAAGTGCAGGGTAGACTCCTTCTGGATGTTGTAGTCTGA 101294
Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
| || || |||||||| || ||||| | |||| |||||||| ||||| || ||
Sbjct 101295 AAGTGTCCGGCCATCCTCGAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGTGG 101354
Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCC 138564
|| || || || || ||| | || | |||| ||| || | ||||| | || |||
Sbjct 101355 GATGCCCTCCTTATC-TTGAATCTTCGACTTAACGTTG-TCGATAGTGTCTGAAGATTCC 101412
Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615
||||||| || | || || || || || || || ||||| || ||||||
Sbjct 101413 ACCTCGAGTGTAATTGTCTTGCCGGTAAGTGTCTTCACAAATATTTGCATG 101463
Score = 82.4 bits (90), Expect = 8e-11
Identities = 138/196 (70%), Gaps = 4/196 (2%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|| ||||| || |||||||||||||| | || || ||||| || || || ||||
Sbjct 101497 GATTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCG 101556
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539
|||| || ||||| ||||| || || || || || ||||| ||| | || | || |
Sbjct 101557 AAGATCAGGCGCTGCTGGTCGGGTGGGATGCCCTCCTTGTC-CTGAATCTTCGACTTGAC 101615
Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598
||| || | ||||| | |||||| ||||||| || | || || || |||| || |
Sbjct 101616 GTTG-TCAATCGTGTCCGACGACTCAACCTCGAGGGTGATGGTCTTGCCGGTCAAGGTCT 101674
Query 138599 TTACAAAAATCTGCAT 138614
| || || ||||||||
Sbjct 101675 TGACGAAGATCTGCAT 101690
>seq64
Length=168546
Score = 82.4 bits (90), Expect = 8e-11
Identities = 129/182 (71%), Gaps = 2/182 (1%)
Strand=Plus/Minus
Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484
|||| |||||||||||||| || ||| || || || || || || |||| |||
Sbjct 20796 CCTTCTGAATGTTGTAGTCCGACAGAGTGCGGCCATCTTCAAGCTGCTTTCCGGCGAAGA 20737
Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGAT-TTTTTGTTTTAATTGT 138543
| | |||||| |||||||| || || || || ||||| ||| || | || ||||
Sbjct 20736 TCAAACGCTGCTGGTCCGGTGGAATGCCCTCCTTGTCTTGGATCTTGCTCTTGACATTG- 20678
Query 138544 TCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACA 138603
|| | ||||||| | ||||| || |||| ||| | || || ||||| || || |||||
Sbjct 20677 TCGATGGTGTCGCTAGACTCGACTTCGAGCGTGATGGTCTTGCCAGTGAGGGTCTTTACG 20618
Query 138604 AA 138605
||
Sbjct 20617 AA 20616
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496259354189520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |