Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09- 23] 491 sequences; 33,245,410 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq8 190 3e-43 seq31 120 4e-22 >seq8 Length=557162 Score = 190 bits (210), Expect = 3e-43 Identities = 1119/1769 (63%), Gaps = 47/1769 (3%) Strand=Plus/Plus Query 115526 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 115585 ||||||| || ||| || | || | || || ||||||||||| || |||||||| | Sbjct 458859 TGAACTGGATAGGTGCCGACGCAGCTTGTGTACGAAGGTAGTACATGCCAGTCTTGAGAC 458918 Query 115586 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGTGTTGGACTTTCCATGA 115645 | ||||||| || | |||||| | | |||| | ||||| | |||| Sbjct 458919 CAAGCTTCCAACCAGCGAAATGCATGCTCGTGATCTTGCCCATGGTTGGCTCCTTCATGT 458978 Query 115646 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCA 115705 || |||| || || || |||||||||||| || || || || ||||| | | | Sbjct 458979 GGATATTCAAGCTCTGAGACTGATCGATGAAGGCACCACGGTCAGCAGCCATCTGGACGA 459038 Query 115706 CATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATAT 115765 | | |||| ||||| || || |||| || ||| | ||||||||||| | Sbjct 459039 TGTTACGCTGGCTGATCTCCCAGACGGTCTTGTAAAGTGCCTTGAGGTCATCTGGGATGT 459098 Query 115766 CCACGATATTTTGGATAGAGCC---ACCTGCCTTGACCATGAGATCCTTCATATCCTTTG 115822 || ||||| || || | | || ||| || | | |||||| | || | Sbjct 459099 TGGGAATGCGCTGGATGGAACCGTTATCGGCAATGA---TGCGGTTCTTCATGTTCTCAG 459155 Query 115823 ACCAGAGACCAATCTTCTTGAGATCCTCCACGAGGTGCTTATTGACAACAACAAACTCAC 115882 |||| |||||| | ||||||| || || ||||| || ||||| | Sbjct 459156 ACCACAGACCACGGTCGACAAGATCCTTCAGCAGCCATGGGTTGACGACCTGGAACTCGC 459215 Query 115883 CCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTAC 115942 | || | | || | ||||||||| ||||||||||||| |||||||||||| | Sbjct 459216 CGGCCAAGACACGACGGGAGTAGATGTTGCTCGTGTATGGCTCGAAGCACTCATTGAAGC 459275 Query 115943 CCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGAC 116002 ||| ||| || | || || || || ||||| ||||| | || || |||||| | Sbjct 459276 CCATGATCTGTGAGGTCGATGCGGTAGGCATAGGTGCAACAAGCAGCGAGTTGCGCA--- 459332 Query 116003 CCACCCCCCTAATGCGTTC-----CTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTC 116057 |||| || | ||| || |||||| || ||||||| | || | ||| Sbjct 459333 -CACCATGCTGA-GCGATCTTGGCCTTGAGCTCGGCCCAGTCCCAC---AGGTCTGTAGG 459387 Query 116058 CCCCT---CCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGT 116114 || ||||||| || |||| || ||||| || |||| || |||| | || Sbjct 459388 AGTCTTGCCCCACATGTCGTACTGAAGCTCGCCTTGCGATACTGGAGAGCCCTGGTAAGT 459447 Query 116115 CTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACAT 116174 ||| ||||| || ||| || | ||| | ||||| || || || || || || Sbjct 459448 CTCGTATGGACCAAGCTTCTCGGCAAGCTCGCACGAAGCCTCAAGAGCGGCATGGTAGAT 459507 Query 116175 TGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCA 116234 ||||| || || | || | ||||||||||| || || || | | |||| Sbjct 459508 GGTCTCGAAGATATGGATGTTGAGCTCCTTGGCCTCGGGCGAGTCGAATGGCATACGGAG 459567 Query 116235 CAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATT 116294 | || |||| || ||||| | |||||| || ||||| || || || | | || Sbjct 459568 GGCCAAGAAAGCATCAGCAAGACCGTTGACACCCAGACCAATAGGTCGGTGACGGAAGTT 459627 Query 116295 AGACTTTCGAGCGGTCTCC-ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTT 116353 ||| || || ||| || || ||| | || | ||||| | | || | || Sbjct 459628 GCTCTTCCGTGCC-TCTGGTACTGGGTAATAGTTGATCTCGATGGTCTTGTTCAAGTTGC 459686 Query 116354 TGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATC-AAAACTGCGAGTCTCTTCA 116412 ||||||||||| |||| || |||||||| | | | || ||||| || | ||| Sbjct 459687 GAGTGACAACCTTGGTGACCTCGTGAAGCTTCTTGAAGTCGAAAACCTCG----TTTTCG 459742 Query 116413 TTGACA---TACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTA 116469 || || || | || || || | || |||| || || |||| | |||||| Sbjct 459743 ATGTCAACGTATGTCGGCAGAGCAAGCGAGGCCAAGTTGCAGACAGCGACCTCATCTGGT 459802 Query 116470 TCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTT 116529 ||| |||||| || ||||| || ||||| || ||||| || |||||||| | |||||| Sbjct 459803 GCAGAGTACTCCATGATTTCAGTGCACAAGTTCGAACTTTTGATGGTGCCAAGGTTCTTC 459862 Query 116530 TGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTT 116589 || || ||| ||| ||||||||||| || || | || || || ||||| || Sbjct 459863 TGGTTGCTCTTGCGGTTGGCGGCATCCTTGTACAGGATGAAAGGTGTGCCAGTCTCGGTC 459922 Query 116590 TGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCC 116648 |||| | ||||| || | ||| | | || | ||| | || || | | | | | Sbjct 459923 TGGGCTTCAAGAATTGCATACCAGATCTTCTG-GGCGCGAACGGTCTC-ACGACCCTTAC 459980 Query 116649 CTCCTC-CTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCC 116707 || ||| ||| || |||||| ||| ||||| ||||| | || || | | Sbjct 459981 CTTCTCTCTCATATCGCTCGTAGAGCTCCTTGAACTCATCACCGTAGACGTCAGACAAGC 460040 Query 116708 CTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGA 116767 | || || || || || | || | ||| || || ||| || |||| ||||| Sbjct 460041 CAGGGCACTCATTGGGGCACATCAGGGTCCAAGTGCCGTTCTGCTCGACGCGCTCCATGA 460100 Query 116768 AGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCT 116827 |||| ||||||||||| || || |||||||||| ||| || |||| || | || | Sbjct 460101 AGAGATCTGGGATCCAAAGGGCGTAGAAGAGATCGCGAGCACGGACTTCCTCCTTGCCGT 460160 Query 116828 GATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCG 116887 | || ||| | |||| || | | || ||| |||||||| || || ||||| | | Sbjct 460161 GGTTCTTACGGAGGTCCATGAACTGAAAGACATCGGCGTGCCATGGCTCAAGGTAGATGG 460220 Query 116888 CGATTGACCCCTTGCG---ACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATA 116944 | | | || ||| ||| |||||| || || | || || ||| | | Sbjct 460221 CAAAGGCACCTGGGCGCTTGTTGCCACCCTGGTCGACGTAGCGAGCAGTGTTGTTGTACA 460280 Query 116945 CGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACTT 117002 | | | ||| || | | ||| | ||| ||| || || || |||| ||| || || Sbjct 460281 CTCTCAACATCGGTACAAGACCGTTGGATGTGCCGTTGGTGCCACCGATATAGGA-ACCA 460339 Query 117003 GTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGC 117062 | | || | || || ||| | |||| ||||||||| || || ||| ||||| || Sbjct 460340 G-TAGCACGGATATTGTGAACATGCAGACCAATACCGCCAGCGTTCTTGGAGATCATAGC 460398 Query 117063 GCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAA 117122 || | |||| || ||||||| || ||||| |||| |||| | || || | ||| Sbjct 460399 ACATGTCTTGAGGGTGTCGTAGATGCCGTCGATGCTGTCATCCTTCATGGCAATCAAGAA 460458 Query 117123 GCAGCTCGACATTTGTGGCCT-TGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGA 117181 |||| | || || ||| | ||||| |||||| |||| || ||||| | ||| || Sbjct 460459 GCAGGAAGCCAACTG-GGCTTGCGGTGTTCCAGCGCTGAAAAGCGTTGGCGACGCATGTG 460517 Query 117182 TGAACATACCT-TGGGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCG 117240 |||| ||| | | ||||| | | ||| ||||| | ||| ||| ||||| ||| Sbjct 460518 TGAA-GTACTTCAGCGACATGTAGTTGTATGTCTCAATCGCAGCCTCAATATCTTCTCCG 460576 Query 117241 TGAATACCGATTGAGACCCGCATAAACAT 117269 || ||||||| | || ||||| | ||| Sbjct 460577 TGGATACCGACCGCCACACGCATGATCAT 460605 >seq31 Length=267444 Score = 120 bits (132), Expect = 4e-22 Identities = 296/441 (67%), Gaps = 20/441 (5%) Strand=Plus/Minus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290 ||| || || || ||||||||||||||||| ||||| || | || ||| |||||||| Sbjct 238992 GTACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGTGAGATGTTCTCCAT 238933 Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGTTGGCACC--CCAATCTGTTTGA 127343 || || |||||||| | | ||| | | |||||| | |||| | Sbjct 238932 GAAGTCGAATGGGTTGGTGGCGTTGTAGAACTTCTTGTTGCCGAGTGCCAAA-------A 238880 Query 127344 GGAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGA 127403 | || || || | ||| |||| ||||| | ||||| ||| |||||| |||| | Sbjct 238879 GCAGGCGGTCGGCCACGAACTCGATGTATTGTGACATGAGACCAGCGTTCATGCCGAGAA 238820 Query 127404 GGTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGA 127463 | || ||||| || || || || |||| ||| |||||| | || || || | || Sbjct 238819 GCTTGCATGGCAGAGCATCTGTGAGGAACTCCTGCTCAATAGCAACTGCCTCAACGATGA 238760 Query 127464 TGGCGTGAATA-GTGTCCACCCCAGGTCTATTGCGTAAAGT-CTTGAAGAGTTCCACAG- 127520 || || | | ||| || | || | || | | |||| | ||| || |||| Sbjct 238759 TGCTCTGCACAAGTG-CCTGATCTGGCTTGTT-CTTCAAGTGCGAGAACAGGAG-ACAGG 238703 Query 127521 CAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTG 127580 | || ||| ||| | |||||| ||||||||||| || || |||||||| || || | Sbjct 238702 CGAAGTCTGTGTGCATACCCTCATCACGGGAGATAAGCTCGTTCGAGAATGTAAGGCCAG 238643 Query 127581 GCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCC 127640 ||||||||| |||||||||| |||||| || || || || || || |||||||| | Sbjct 238642 CCATGAGACCACGCTTCTTCAGCCAGAAGATGGCGGCGAAGGAACCGGAAAAGAAGATAC 238583 Query 127641 CCTCCACACACGCGAACGCAA 127661 |||| ||| ||||| |||| Sbjct 238582 CCTCAACAGCGGCGAAAGCAA 238562 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613503434599560