Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09- 23] 491 sequences; 33,245,410 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq25 123 6e-23 seq64 111 4e-19 seq12 87.8 4e-12 >seq25 Length=313491 Score = 123 bits (136), Expect = 6e-23 Identities = 148/201 (74%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485 ||| || || |||||||| |||| ||||||||| | | |||| ||||| || ||||| Sbjct 101259 GTGCAGGGTAGACTCCTTCTGGATGTTGTAGTCTGAAAGTGTCCGGCCATCCTCGAGCTG 101318 Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545 ||| || ||||||||||||||||||||||| || || || || || |||||||| Sbjct 101319 CTTACCAGCGAAGATGAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTATCTTGAATCTT 101378 Query 199546 TTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605 ||| ||| |||| ||||||| | ||| || || | || || ||||| || || Sbjct 101379 CGACTTAACGTTGTCGATAGTGTCTGAAGATTCCACCTCGAGTGTAATTGTCTTGCCGGT 101438 Query 199606 GAGAGTTTTCACAAAAATTTG 199626 || || |||||||| ||||| Sbjct 101439 AAGTGTCTTCACAAATATTTG 101459 Score = 93.3 bits (102), Expect = 1e-13 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || |||||||| || || || ||||| |||| ||||||||| | || | ||||| Sbjct 101479 AGCACAAGGTGTAGCGTGGATTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCATCC 101538 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| ||||||||||| || ||||||||||| || || || || ||| Sbjct 101539 TCAAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGTGGGATGCCCTCCTTGTCC 101598 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||| ||| || | ||||| | | || || || | ||||| ||| Sbjct 101599 TGAATCTTCGACTTGACGTTGTCAATCGTGTCCGACGACTCAACCTCGAGGGTGATGGTC 101658 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || | || || || || || || Sbjct 101659 TTGCCGGTCAAGGTCTTGACGAAGATCTG 101687 Score = 87.8 bits (96), Expect = 4e-12 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 |||||||||||||| || |||||| || | ||||||||| | || | ||||| Sbjct 101707 AGGACAAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTGAGGGTGCGACCATCC 101766 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || |||||||| | ||||||||||||||| ||| || || ||| Sbjct 101767 TCGAGCTGCTTGCCTGCGAAGATCAAGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCC 101826 Query 199538 TGAATCTT 199545 || ||||| Sbjct 101827 TGGATCTT 101834 >seq64 Length=168546 Score = 111 bits (122), Expect = 4e-19 Identities = 133/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499 |||| || | ||||||||| | || ||| | |||||||| ||||||||||||||||||| Sbjct 20796 CCTTCTGAATGTTGTAGTCCGACAGAGTGCGGCCATCTTCAAGCTGCTTTCCGGCGAAGA 20737 Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATT 199559 | | ||||||||||||||| ||| || || || || ||||| ||| || | Sbjct 20736 TCAAACGCTGCTGGTCCGGTGGAATGCCCTCCTTGTCTTGGATCTTGCTCTTGACATTGT 20677 Query 199560 CGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAA 199619 ||| |||||| | | || || || | |||||| ||||| || ||||| || || || | Sbjct 20676 CGATGGTGTCGCTAGACTCGACTTCGAGCGTGATGGTCTTGCCAGTGAGGGTCTTTACGA 20617 Query 199620 A 199620 | Sbjct 20616 A 20616 >seq12 Length=397188 Score = 87.8 bits (96), Expect = 4e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| || ||||| || |||||| |||| ||||||||| | | || | ||||| Sbjct 53191 AGGACGAGATGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCATCC 53250 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 || |||||||| ||||||||||| || |||||||||||||| Sbjct 53251 TCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGG 53291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178914183477897