Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09-
23] 491 sequences; 33,245,410 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq31 248 1e-60
seq51 127 3e-24
seq57 116 5e-21
>seq31
Length=267444
Score = 248 bits (274), Expect = 1e-60
Identities = 507/752 (67%), Gaps = 6/752 (1%)
Strand=Plus/Minus
Query 7406 TTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCT 7465
||||| | ||| ||||| || || | | ||||| || ||| | ||||| ||
Sbjct 135629 TTCTTGTTTTTGCGTTTGAATTCGTTAACAAAGTGGTTAACGAGGCGATTGTCGAAGTCC 135570
Query 7466 TCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATG 7525
|||||||||||||| || || || || || | ||||| || |||||||| | |||||
Sbjct 135569 TCACCACCCAAGTGAGTGTCACCGGCAGTGGACTTGACCTCGAAGATACCCTCCTCAATT 135510
Query 7526 TTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCG 7585
| | || || ||||| || ||||||||||||| ||| || ||||| ||||| |||
Sbjct 135509 GTGAGCAGTGACACATCGAAGGTACCACCACCCAAGTCGAAGATGAGCACGTTGCGCTCG 135450
Query 7586 TCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATA 7645
| || | ||||| || ||||| || || || || || || ||||| || || || |||
Sbjct 135449 CCCTCAGTCTTCTTGTCCAGACCATAGGCAATGGCAGCTGCAGTTGGCTCGTTGATGATA 135390
Query 7646 CGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCG 7705
|| || ||| |||||||| || | ||||| || || ||||||| || || |||
Sbjct 135389 CGGAGGACGTTAAGGCCAGCGATGAGACCAGCATCCTTGGTTGCTTGTCTCTGGGAGTCG 135330
Query 7706 TTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCC 7765
|| ||||| || || || || || || |||| | || | |||||| || || ||
Sbjct 135329 TTGAAGTAAGCTGGAACTGTGACAACGGCGTTGTTCACGGTTCCACCGAGGTAAGACTCT 135270
Query 7766 GCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTC 7825
||| | || ||| ||||| || | ||| | || ||||| || | | || || |||
Sbjct 135269 GCGGTCTCACGCATCTTGGTGAGGATCATGGCGGAGATCTCCTCTGGTGTGAATTGCTTC 135210
Query 7826 GTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTA 7885
|| || || || || || || | || ||| |||| ||| |||||
Sbjct 135209 TCCTCCCCCTTGAACTCGACCGAGATGACTGGCTTA---CCAGCCTTCTCGATGACCTTG 135153
Query 7886 TACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGA 7945
| | | | |||||||| |||| |||| | || |||||| | ||||| |
Sbjct 135152 AAGGGGAAGTGCTTCATATCTGCTTGTACCTCTGCATCTTGAAACTTGCGACCGATTAAT 135093
Query 7946 CGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCC 8005
|||||||| || || || |||||| ||||||||||| |||||||| || || ||
Sbjct 135092 CGCTTTGCGTCGAAGACGGTGTTTGCTGGGTTCATGGCGACCTGGTTCTTGGCGGCATCA 135033
Query 8006 CCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCT 8065
|| || | || || | || || || |||||| |||| || || || || || ||
Sbjct 135032 CCAATCAATCGCTC---GGTGTCTGTGAAGGCGACGAACGAGGGTGTTGTGCGGTTACCC 134976
Query 8066 TGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTT 8125
|||||||| || || || || | |||||| | | ||| || ||||| || |||||
Sbjct 134975 TGGTCGTTGGCGATGATCTCGATGCGGTCATCTCTGAAGATACCCACGCAGGAGTACGTG 134916
Query 8126 GTTCCTAAATCAATACCGATTGCTTGAGTCAT 8157
|| || || || |||||||||||| | | |||
Sbjct 134915 GTACCCAAGTCGATACCGATTGCTGGTGCCAT 134884
Score = 158 bits (174), Expect = 2e-33
Identities = 258/372 (69%), Gaps = 0/372 (0%)
Strand=Plus/Minus
Query 7021 GATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATT 7080
|||||| || ||||| | || ||||| || || |||||||| ||||| || | || ||
Sbjct 136071 GATGGCAGCCTGGACGGCAGCACCGTACGCAACAGCCTCATCTGGGTTGATGGACTTGTT 136012
Query 7081 CAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGA 7140
| || || || || || | || || | ||| | || || || ||||| || || ||
Sbjct 136011 TGGCTCCTTGCCATTGAAGAAGTCGGAGACCATCTTCTGGATCTTGGGGATACGAGTGGA 135952
Query 7141 TCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGT 7200
|||||||| | ||||| || | || ||||| |||||||| | ||| || || ||
Sbjct 135951 ACCACCGACGAGGACGATCTCGTGAACGGAGGATTTGTCGATCTTGGCGTCGCGCAGGGT 135892
Query 7201 TTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGC 7260
||||| || ||||| ||||| | |||| || || ||||| || || ||
Sbjct 135891 ACGCTCGACTGGCTCCATGGTGGAGCGGAAGAGGTCCTGGCAAAGCTCCTCGAAGCGAGC 135832
Query 7261 ACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGT 7320
|| || |||||||| ||||| || | ||| ||||| | ||| || || ||||| | ||
Sbjct 135831 GCGCGTGATGGATGTGTAGAAGTCTATGCCCTCGTAGAGCGAGTCGATCTCAATAGAGGT 135772
Query 7321 TTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAG 7380
|| || | || | || || || |||||||| || || ||||||| |||||||||
Sbjct 135771 CTGCGCGCTGCTGGAGAGGGTGCGTTTGGCGCGCTCGCATGCTGTTCGTAGACGACGAAG 135712
Query 7381 GGCACGCGGGTT 7392
|||||| | |||
Sbjct 135711 GGCACGGGCGTT 135700
>seq51
Length=204964
Score = 127 bits (140), Expect = 3e-24
Identities = 217/314 (69%), Gaps = 3/314 (1%)
Strand=Plus/Minus
Query 7469 CCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTT 7528
|| |||||||| || || || ||||| || ||||| |||| ||| || | ||||
Sbjct 75456 CCGCCCAAGTGGGTGTCACCAGCGGTGGCCTTGACGGTGAAGACACCGCCCTGGATGTGA 75397
Query 7529 AACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTT---CGTATCG 7585
| | || |||||||| ||||||||||| || || | ||||| ||||| | | |
Sbjct 75396 AGGAGGGAGACATCAAAAGTACCACCACCAAGATCGTAGATGAGGACGTTTCGCTCCTTG 75337
Query 7586 TCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATA 7645
||| |||| |||||||||| |||||||| || || ||||| || || || |||
Sbjct 75336 TCGGATTTGCCGGAGCCGAGACCGTATGCGATAGCAGCGGCAGTTGGCTCGTTGATGATA 75277
Query 7646 CGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCG 7705
|| ||| ||| ||||| || || | | || || || || ||||||| || |||
Sbjct 75276 CGGAGAACGTTAAGGCCGGCGATGGCACCAGCGTCCTTGGTGGCTTGTCTCTGGTTGTCG 75217
Query 7706 TTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCC 7765
|| ||||| || ||||| || | ||| || | | ||| ||||| ||||| | | ||
Sbjct 75216 TTGAAGTAAGCTGGGACAGTGATGACGGCCTTCTCGACCTTCTTGCCGAGCTTGGTCTCA 75157
Query 7766 GCGATATCTTTCAT 7779
|||| || |||||
Sbjct 75156 GCGACCTCCTTCAT 75143
>seq57
Length=191715
Score = 116 bits (128), Expect = 5e-21
Identities = 240/354 (68%), Gaps = 5/354 (1%)
Strand=Plus/Plus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
|||||||| |||||||| | || || || || || || || | || || || | ||
Sbjct 20117 TCGAAATCCTCACCACCAAGATGGGTGTCTCCAGCAGTTGCCTGCACCTCGAAAACGCCC 20176
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGA-GTAC 7575
|| | | || | || ||||| || ||||||||||| || || | | || | |
Sbjct 20177 TGGTCGACAGTCAAAATGGAGACATCGAAGGTACCACCACCGAGATCGTACACGATGATC 20236
Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635
||| || | ||| | |||| ||||| ||||| |||| ||| ||||| || |||||
Sbjct 20237 TGGCGT-TCCTTGTC---GGTCTTGTCGAGTCCGTAGGCGAGAGCGGCCGCGGTGGGTTC 20292
Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695
|| | | ||| ||| ||| || || || || || | || || || || || ||
Sbjct 20293 GTTGACGACACGGAGAACGTTGAGACCGGCGATCGTGCCAGCGTCCTTGGTGGCGGCACG 20352
Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755
|| | ||||| |||||||| ||||| || || || |||| || || |||| ||||||
Sbjct 20353 CTGGGCGTCGTTGAAGTAGGCTGGGACAGTAACAACTGCGTTGGTAACCTTCTCACCGAG 20412
Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809
||| || || |||| || ||||| ||| || | ||| ||||| | |||||
Sbjct 20413 ATAGGACTCGGCGACTTCCTTCATCTTGCCCAGGATCATGGATGAGACTTCTTC 20466
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635128901872440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |