Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09- 23] 491 sequences; 33,245,410 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq31 248 1e-60 seq51 127 3e-24 seq57 116 5e-21 >seq31 Length=267444 Score = 248 bits (274), Expect = 1e-60 Identities = 507/752 (67%), Gaps = 6/752 (1%) Strand=Plus/Minus Query 7406 TTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCT 7465 ||||| | ||| ||||| || || | | ||||| || ||| | ||||| || Sbjct 135629 TTCTTGTTTTTGCGTTTGAATTCGTTAACAAAGTGGTTAACGAGGCGATTGTCGAAGTCC 135570 Query 7466 TCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATG 7525 |||||||||||||| || || || || || | ||||| || |||||||| | ||||| Sbjct 135569 TCACCACCCAAGTGAGTGTCACCGGCAGTGGACTTGACCTCGAAGATACCCTCCTCAATT 135510 Query 7526 TTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCG 7585 | | || || ||||| || ||||||||||||| ||| || ||||| ||||| ||| Sbjct 135509 GTGAGCAGTGACACATCGAAGGTACCACCACCCAAGTCGAAGATGAGCACGTTGCGCTCG 135450 Query 7586 TCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATA 7645 | || | ||||| || ||||| || || || || || || ||||| || || || ||| Sbjct 135449 CCCTCAGTCTTCTTGTCCAGACCATAGGCAATGGCAGCTGCAGTTGGCTCGTTGATGATA 135390 Query 7646 CGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCG 7705 || || ||| |||||||| || | ||||| || || ||||||| || || ||| Sbjct 135389 CGGAGGACGTTAAGGCCAGCGATGAGACCAGCATCCTTGGTTGCTTGTCTCTGGGAGTCG 135330 Query 7706 TTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCC 7765 || ||||| || || || || || || |||| | || | |||||| || || || Sbjct 135329 TTGAAGTAAGCTGGAACTGTGACAACGGCGTTGTTCACGGTTCCACCGAGGTAAGACTCT 135270 Query 7766 GCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTC 7825 ||| | || ||| ||||| || | ||| | || ||||| || | | || || ||| Sbjct 135269 GCGGTCTCACGCATCTTGGTGAGGATCATGGCGGAGATCTCCTCTGGTGTGAATTGCTTC 135210 Query 7826 GTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTA 7885 || || || || || || || | || ||| |||| ||| ||||| Sbjct 135209 TCCTCCCCCTTGAACTCGACCGAGATGACTGGCTTA---CCAGCCTTCTCGATGACCTTG 135153 Query 7886 TACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGA 7945 | | | | |||||||| |||| |||| | || |||||| | ||||| | Sbjct 135152 AAGGGGAAGTGCTTCATATCTGCTTGTACCTCTGCATCTTGAAACTTGCGACCGATTAAT 135093 Query 7946 CGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCC 8005 |||||||| || || || |||||| ||||||||||| |||||||| || || || Sbjct 135092 CGCTTTGCGTCGAAGACGGTGTTTGCTGGGTTCATGGCGACCTGGTTCTTGGCGGCATCA 135033 Query 8006 CCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCT 8065 || || | || || | || || || |||||| |||| || || || || || || Sbjct 135032 CCAATCAATCGCTC---GGTGTCTGTGAAGGCGACGAACGAGGGTGTTGTGCGGTTACCC 134976 Query 8066 TGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTT 8125 |||||||| || || || || | |||||| | | ||| || ||||| || ||||| Sbjct 134975 TGGTCGTTGGCGATGATCTCGATGCGGTCATCTCTGAAGATACCCACGCAGGAGTACGTG 134916 Query 8126 GTTCCTAAATCAATACCGATTGCTTGAGTCAT 8157 || || || || |||||||||||| | | ||| Sbjct 134915 GTACCCAAGTCGATACCGATTGCTGGTGCCAT 134884 Score = 158 bits (174), Expect = 2e-33 Identities = 258/372 (69%), Gaps = 0/372 (0%) Strand=Plus/Minus Query 7021 GATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATT 7080 |||||| || ||||| | || ||||| || || |||||||| ||||| || | || || Sbjct 136071 GATGGCAGCCTGGACGGCAGCACCGTACGCAACAGCCTCATCTGGGTTGATGGACTTGTT 136012 Query 7081 CAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGA 7140 | || || || || || | || || | ||| | || || || ||||| || || || Sbjct 136011 TGGCTCCTTGCCATTGAAGAAGTCGGAGACCATCTTCTGGATCTTGGGGATACGAGTGGA 135952 Query 7141 TCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGT 7200 |||||||| | ||||| || | || ||||| |||||||| | ||| || || || Sbjct 135951 ACCACCGACGAGGACGATCTCGTGAACGGAGGATTTGTCGATCTTGGCGTCGCGCAGGGT 135892 Query 7201 TTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGC 7260 ||||| || ||||| ||||| | |||| || || ||||| || || || Sbjct 135891 ACGCTCGACTGGCTCCATGGTGGAGCGGAAGAGGTCCTGGCAAAGCTCCTCGAAGCGAGC 135832 Query 7261 ACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGT 7320 || || |||||||| ||||| || | ||| ||||| | ||| || || ||||| | || Sbjct 135831 GCGCGTGATGGATGTGTAGAAGTCTATGCCCTCGTAGAGCGAGTCGATCTCAATAGAGGT 135772 Query 7321 TTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAG 7380 || || | || | || || || |||||||| || || ||||||| ||||||||| Sbjct 135771 CTGCGCGCTGCTGGAGAGGGTGCGTTTGGCGCGCTCGCATGCTGTTCGTAGACGACGAAG 135712 Query 7381 GGCACGCGGGTT 7392 |||||| | ||| Sbjct 135711 GGCACGGGCGTT 135700 >seq51 Length=204964 Score = 127 bits (140), Expect = 3e-24 Identities = 217/314 (69%), Gaps = 3/314 (1%) Strand=Plus/Minus Query 7469 CCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTT 7528 || |||||||| || || || ||||| || ||||| |||| ||| || | |||| Sbjct 75456 CCGCCCAAGTGGGTGTCACCAGCGGTGGCCTTGACGGTGAAGACACCGCCCTGGATGTGA 75397 Query 7529 AACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTT---CGTATCG 7585 | | || |||||||| ||||||||||| || || | ||||| ||||| | | | Sbjct 75396 AGGAGGGAGACATCAAAAGTACCACCACCAAGATCGTAGATGAGGACGTTTCGCTCCTTG 75337 Query 7586 TCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATA 7645 ||| |||| |||||||||| |||||||| || || ||||| || || || ||| Sbjct 75336 TCGGATTTGCCGGAGCCGAGACCGTATGCGATAGCAGCGGCAGTTGGCTCGTTGATGATA 75277 Query 7646 CGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCG 7705 || ||| ||| ||||| || || | | || || || || ||||||| || ||| Sbjct 75276 CGGAGAACGTTAAGGCCGGCGATGGCACCAGCGTCCTTGGTGGCTTGTCTCTGGTTGTCG 75217 Query 7706 TTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCC 7765 || ||||| || ||||| || | ||| || | | ||| ||||| ||||| | | || Sbjct 75216 TTGAAGTAAGCTGGGACAGTGATGACGGCCTTCTCGACCTTCTTGCCGAGCTTGGTCTCA 75157 Query 7766 GCGATATCTTTCAT 7779 |||| || ||||| Sbjct 75156 GCGACCTCCTTCAT 75143 >seq57 Length=191715 Score = 116 bits (128), Expect = 5e-21 Identities = 240/354 (68%), Gaps = 5/354 (1%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 |||||||| |||||||| | || || || || || || || | || || || | || Sbjct 20117 TCGAAATCCTCACCACCAAGATGGGTGTCTCCAGCAGTTGCCTGCACCTCGAAAACGCCC 20176 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGA-GTAC 7575 || | | || | || ||||| || ||||||||||| || || | | || | | Sbjct 20177 TGGTCGACAGTCAAAATGGAGACATCGAAGGTACCACCACCGAGATCGTACACGATGATC 20236 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 ||| || | ||| | |||| ||||| ||||| |||| ||| ||||| || ||||| Sbjct 20237 TGGCGT-TCCTTGTC---GGTCTTGTCGAGTCCGTAGGCGAGAGCGGCCGCGGTGGGTTC 20292 Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 || | | ||| ||| ||| || || || || || | || || || || || || Sbjct 20293 GTTGACGACACGGAGAACGTTGAGACCGGCGATCGTGCCAGCGTCCTTGGTGGCGGCACG 20352 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 || | ||||| |||||||| ||||| || || || |||| || || |||| |||||| Sbjct 20353 CTGGGCGTCGTTGAAGTAGGCTGGGACAGTAACAACTGCGTTGGTAACCTTCTCACCGAG 20412 Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809 ||| || || |||| || ||||| ||| || | ||| ||||| | ||||| Sbjct 20413 ATAGGACTCGGCGACTTCCTTCATCTTGCCCAGGATCATGGATGAGACTTCTTC 20466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635128901872440