Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09- 23] 491 sequences; 33,245,410 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq8 273 3e-68 seq31 111 2e-19 >seq8 Length=557162 Score = 273 bits (302), Expect = 3e-68 Identities = 912/1398 (65%), Gaps = 41/1398 (3%) Strand=Plus/Minus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 || ||| | ||| ||||||| || ||| |||||||||| || ||||||||||| ||| Sbjct 460614 CCGCAGCAGATGATCATGCGTGTGGCGGTCGGTATCCACGGAGAAGATATTGAGGCTGCG 460555 Query 111672 TTGGAGACATACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCTT 111730 | ||||||||| || | ||||| | | ||| |||| || || | ||||| || || Sbjct 460554 ATTGAGACATACAACTACATGTCGCTGAAGTAC-TTCACACATGCGTCGCCAACGCTTTT 460496 Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790 || |||||| ||||| | |||| || | || ||| | ||||| | ||||| || Sbjct 460495 CAGCGCTGGAACACCGCAAGCCCAGTTGGCTTCCTGCTTCTTGATTGCCATGAAGGATGA 460436 Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGG 111850 ||| | ||||| |||| ||| |||| |||||| ||||| ||| ||||| Sbjct 460435 CAGCATCGACGGCATCTACGACACCCTCAAGACATGTGCTATGATCTCCAAGAACGCTGG 460376 Query 111851 TGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTACAAA 111910 ||||| || |||| | || || || | || | || ||| | || || || Sbjct 460375 CGGTATTGGTCTGCATGTTCACAATATCCGTGCTACTGGTTCCTATATCGGTGGCACCAA 460316 Query 111911 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 111970 || ||| | ||| || | || ||| | | || | ||| ||| || ||||| || Sbjct 460315 CGGCACATCCAACGGTCTTGTACCGATGTTGAGAGTGTACAACAACACTGCTCGCTACGT 460256 Query 111971 AAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCA 112024 |||| | ||| ||| | ||| || | || |||| |||||||||||||| Sbjct 460255 CGACCAGGGTGGCAACAAGCGCCC--AGGTGCCTTTGCCA-TCTACCTTGAGCCATGGCA 460199 Query 112025 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTG 112084 ||| ||| || | ||||| | || | ||| ||||| || | ||||| | || || Sbjct 460198 CGCCGATGTCTTTCAGTTCATGGACCTCCGTAAGAACCACGGCAAGGAGGAAGTCCG-TG 460140 Query 112085 C-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 112143 | ||||||||||||| ||| || ||||| ||||||||||||||| || | || ||| ||| Sbjct 460139 CTCGCGATCTCTTCTACGCCCTTTGGATCCCAGATCTCTTCATGGAGCGCGTCGAGCAGA 460080 Query 112144 GTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTG 112203 |||| |||| | || | || || | || || || | || || | | |||| Sbjct 460079 ACGGCACTTGGACCCTGATGTGCCCCAATGAGTGCCCTGGCTTGTCTGACGTCTACGGTG 460020 Query 112204 AGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTGC 112263 | ||||| | | |||||| || ||| |||| || || || ||| || | Sbjct 460019 ATGAGTTCAAGGAGCTCTACGAGCGATATGAGAGAGAAGGTAAGGGTCGTGAGACCGTTC 459960 Query 112264 CAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATAT 112322 || | || | | ||| | || ||||| | | || ||||||||||| ||||| | Sbjct 459959 GCGC-CCAGAAGATCTGGTATGCAATTCTTGAAGCCCAGACCGAGACTGGCACACCTTTC 459901 Query 112323 ATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAG 112382 || || ||||| || ||| |||| ||||| || || ||||| | || ||||| Sbjct 459900 ATCCTGTACAAGGATGCCGCCAACCGCAAGAGCAACCAGAAGAACCTTGGCACCATCAAA 459841 Query 112383 AGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGT 112442 ||||| ||| | || || |||||| |||| | | | ||||||| ||||| || Sbjct 459840 AGTTCGAACTTGTGCACTGAAATCATGGAGTACTCTGCACCAGATGAGGTCGCTGTCTGC 459781 Query 112443 AACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTT--GATT 112500 ||| | || || | ||||| || | || || || || || || || ||| || | Sbjct 459780 AACTTGGCCTCGCTTGCTCTGCCGACATACGTTGA--CATCGAAAACGAGGTTTTCGACT 459723 Query 112501 ATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATA 112560 | || || ||||| || || || |||||| ||| | |||| || || | Sbjct 459722 TCAAGAAGCTTCACGAGGTCACCAAGGTTGTCACTCGCAACTTGAACAAGACCATCGAGA 459663 Query 112561 GAAATTTTTACCCCGT-TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGT 112619 || | |||||| || ||| || || || || | | ||||| || |||||| Sbjct 459662 TCAACTATTACCCAGTACCAGA-GGCACGGAAGAGCAACTTCCGTCACCGACCTATTGGT 459604 Query 112620 CTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTG---TCGCCACG-CATTTGATTC 112675 || |||||| | ||||| || |||| | ||||| | || | | |||| || || Sbjct 459603 CTGGGTGTCAACGGTCTTGCTGATG----CTTTCTTGGCCCTCCGTATGCCATTCGACTC 459548 Query 112676 CGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGA 112735 ||| || ||||| |||| | ||| || ||||| || || || ||||||||||| Sbjct 459547 GCCCGAGGCCAAGGAGCTCAACATCCATATCTTCGAGACCATCTACCATGCCGCTCTTGA 459488 Query 112736 GGCGAGTTCG---GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCC 112792 ||| |||| ||| | || ||| ||||||||| || || | |||| ||||| Sbjct 459487 GGC---TTCGTGCGAGCTTGCCGAGAAGCTTGGTCCATACGAGACTTACCAGGGCTCTCC 459431 Query 112793 AGCTTCACAAGGGGTGCTTCAATTTGATATGTGGG--AAG-GTGAGACCAAGCTTCACTA 112849 || || ||||| | |||||| | || ||||||| ||| | || | || | Sbjct 459430 AGTATCGCAAGGCGAGCTTCAGTACGACATGTGGGGCAAGACTCCTACAGACCT---GTG 459374 Query 112850 CGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGAT 112909 ||||||| || ||||||| ||| || | ||| | || ||| || | | Sbjct 459373 GGACTGGGCCGAGCTCAAGGCCAAGATCGCTCAGCATGGTGTGCGCAACTCGCTGCTTGT 459314 Query 112910 GGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACC 112969 ||||| ||||| || || || ||| |||| ||| |||| ||||| ||||| || || Sbjct 459313 TGCACCTATGCCTACCGCATCGACCTCACAGATCATGGGCTTCAATGAGTGCTTCGAGCC 459254 Query 112970 CTACACGACGAACATCTA 112987 ||||||| |||||||| Sbjct 459253 ATACACGAGCAACATCTA 459236 >seq31 Length=267444 Score = 111 bits (122), Expect = 2e-19 Identities = 102/129 (79%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 102203 TGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGG 102262 |||||||||||||||||| || ||||||||| ||| || | ||||| |||||||| || Sbjct 238575 TGTTGAGGGTATCTTCTTTTCCGGTTCCTTCGCCGCCATCTTCTGGCTGAAGAAGCGTGG 238634 Query 102263 TCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCA 102322 ||||||| | || || ||||| |||||||||||||| ||||| ||||| | ||| Sbjct 238635 TCTCATGGCTGGCCTTACATTCTCGAACGAGCTTATCTCCCGTGATGAGGGTATGCACAC 238694 Query 102323 AGAGTTTGC 102331 ||| || || Sbjct 238695 AGACTTCGC 238703 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620738590193520