Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09-
23] 491 sequences; 33,245,410 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq9 96.9 4e-15
seq19 95.1 1e-14
>seq9
Length=547261
Score = 96.9 bits (106), Expect = 4e-15
Identities = 224/335 (67%), Gaps = 12/335 (4%)
Strand=Plus/Plus
Query 11668 CGCTTCTTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGG----TTGGC 11723
||||| | || | ||| |||| || |||||||| | ||| || ||| |||||
Sbjct 76772 CGCTTGCTGCCAATAGCATCAAGTTCGTCGATGAAGATGAT----GGCTGGGCTCTTGGC 76827
Query 11724 ACGTGCCTGTTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAAC 11783
|| || | |||| ||||| || |||||||| ||||||||||| ||| | | ||| |
Sbjct 76828 GCGAGCGTTGGCGAATAGTTCGCGGACACGCTTAGCTCCAACACCGACGTATACCTCGTC 76887
Query 11784 GAAGTTTGCGGCAGAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGC 11843
|| | | | || | | |||||| || | ||||||||||| || || ||
Sbjct 76888 AAACTCCGATCCGGACATGTAGAAGAAGGGCACGCCGGCCTCACCAGCGACAGCACGTGC 76947
Query 11844 GAGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGC 11903
|||||||||||| ||||| || || | ||| |||| ||| | || || | |||| |
Sbjct 76948 GAGGAGAGTCTTTCCCGTTCCTGGAGGCCCAACGAGCAGGACACCCTTTGGAAGCTTGCC 77007
Query 11904 ACC--ACTTCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCC 11961
||| | | | || | | || || ||| | |||||| || | ||| | ||||||
Sbjct 77008 ACCCAGCGTACTAA--ATTGATCTGGAGCCTTCAAGAAGTCGACCAGCTCTTGCAGTTCC 77065
Query 11962 TCCTTGGCGGAGTCGATACCCTCAACATCGGTGAA 11996
||||| || |||| ||| | ||||||| |||
Sbjct 77066 TCCTTAGCCTCGTCGCAACCTTGGACATCGGAGAA 77100
>seq19
Length=339122
Score = 95.1 bits (104), Expect = 1e-14
Identities = 215/317 (68%), Gaps = 6/317 (2%)
Strand=Plus/Minus
Query 11683 GCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGTTCGAAAAGT 11742
|| || |||||||||||||| | ||| || ||| ||| || || | |||| ||
Sbjct 34421 GCATCTATCTCATCGATGAAAATGATGCAGGGTGTGTTCTTGCGGGCATTGGCGAACAGG 34362
Query 11743 TCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGCAGAACAC 11802
|| || ||||| | | ||||||||| ||||||||||| ||||| | | | ||| ||
Sbjct 34361 TCTCGGACACGACTGGGTCCAACACCAACGAACATCTCCACGAACTCGGATCCTGAA-AC 34303
Query 11803 TGA-ATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGT 11861
|| | ||| ||||| | ||| || || | ||| || || || |||||||| ||
Sbjct 34302 GGAGAAGAAAGGAACGCCACTCTCTCCTGCTGTTGCTTTCGCAAGTAGCGTCTTACCAGT 34243
Query 11862 ACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC--ACTTCCAAAGTAG 11919
|| |||| || | |||| || || || |||||||| ||||| |||| ||
Sbjct 34242 TCCTGGTGGTCCTGACAGAATTGCTCCTCGTGGGATCTTAGCACCGAGCTTCTGGTATA- 34184
Query 11920 CGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGCGGAGTCGATA 11979
||| | |||| || | |||| ||| | |||| || || |||||| ||| |||
Sbjct 34183 CGC-CTGGCTCTTTCAAGAAGCTCACGAACTCCATAATCTCGAGCTTGGCTTCGTCCATA 34125
Query 11980 CCCTCAACATCGGTGAA 11996
||| ||||||| | |||
Sbjct 34124 CCCGCAACATCAGCGAA 34108
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588972385159800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |