Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09- 23] 491 sequences; 33,245,410 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq9 96.9 4e-15 seq19 95.1 1e-14 >seq9 Length=547261 Score = 96.9 bits (106), Expect = 4e-15 Identities = 224/335 (67%), Gaps = 12/335 (4%) Strand=Plus/Plus Query 11668 CGCTTCTTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGG----TTGGC 11723 ||||| | || | ||| |||| || |||||||| | ||| || ||| ||||| Sbjct 76772 CGCTTGCTGCCAATAGCATCAAGTTCGTCGATGAAGATGAT----GGCTGGGCTCTTGGC 76827 Query 11724 ACGTGCCTGTTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAAC 11783 || || | |||| ||||| || |||||||| ||||||||||| ||| | | ||| | Sbjct 76828 GCGAGCGTTGGCGAATAGTTCGCGGACACGCTTAGCTCCAACACCGACGTATACCTCGTC 76887 Query 11784 GAAGTTTGCGGCAGAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGC 11843 || | | | || | | |||||| || | ||||||||||| || || || Sbjct 76888 AAACTCCGATCCGGACATGTAGAAGAAGGGCACGCCGGCCTCACCAGCGACAGCACGTGC 76947 Query 11844 GAGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGC 11903 |||||||||||| ||||| || || | ||| |||| ||| | || || | |||| | Sbjct 76948 GAGGAGAGTCTTTCCCGTTCCTGGAGGCCCAACGAGCAGGACACCCTTTGGAAGCTTGCC 77007 Query 11904 ACC--ACTTCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCC 11961 ||| | | | || | | || || ||| | |||||| || | ||| | |||||| Sbjct 77008 ACCCAGCGTACTAA--ATTGATCTGGAGCCTTCAAGAAGTCGACCAGCTCTTGCAGTTCC 77065 Query 11962 TCCTTGGCGGAGTCGATACCCTCAACATCGGTGAA 11996 ||||| || |||| ||| | ||||||| ||| Sbjct 77066 TCCTTAGCCTCGTCGCAACCTTGGACATCGGAGAA 77100 >seq19 Length=339122 Score = 95.1 bits (104), Expect = 1e-14 Identities = 215/317 (68%), Gaps = 6/317 (2%) Strand=Plus/Minus Query 11683 GCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGTTCGAAAAGT 11742 || || |||||||||||||| | ||| || ||| ||| || || | |||| || Sbjct 34421 GCATCTATCTCATCGATGAAAATGATGCAGGGTGTGTTCTTGCGGGCATTGGCGAACAGG 34362 Query 11743 TCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGCAGAACAC 11802 || || ||||| | | ||||||||| ||||||||||| ||||| | | | ||| || Sbjct 34361 TCTCGGACACGACTGGGTCCAACACCAACGAACATCTCCACGAACTCGGATCCTGAA-AC 34303 Query 11803 TGA-ATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGT 11861 || | ||| ||||| | ||| || || | ||| || || || |||||||| || Sbjct 34302 GGAGAAGAAAGGAACGCCACTCTCTCCTGCTGTTGCTTTCGCAAGTAGCGTCTTACCAGT 34243 Query 11862 ACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC--ACTTCCAAAGTAG 11919 || |||| || | |||| || || || |||||||| ||||| |||| || Sbjct 34242 TCCTGGTGGTCCTGACAGAATTGCTCCTCGTGGGATCTTAGCACCGAGCTTCTGGTATA- 34184 Query 11920 CGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGCGGAGTCGATA 11979 ||| | |||| || | |||| ||| | |||| || || |||||| ||| ||| Sbjct 34183 CGC-CTGGCTCTTTCAAGAAGCTCACGAACTCCATAATCTCGAGCTTGGCTTCGTCCATA 34125 Query 11980 CCCTCAACATCGGTGAA 11996 ||| ||||||| | ||| Sbjct 34124 CCCGCAACATCAGCGAA 34108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588972385159800