Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09- 23] 491 sequences; 33,245,410 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq8 185 1e-41 seq31 116 4e-21 >seq8 Length=557162 Score = 185 bits (204), Expect = 1e-41 Identities = 887/1388 (64%), Gaps = 39/1388 (3%) Strand=Plus/Plus Query 105935 TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 105994 |||||||| ||||||| || || ||||| ||||| |||| ||| |||| ||| || Sbjct 459236 TAGATGTTGCTCGTGTATGGCTCGAAGCACTCATTGAAGCCCATGATCTGTGAGGTCGAT 459295 Query 105995 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCC 106054 || || ||||| ||||| | | || ||| || | ||| | | ||| || Sbjct 459296 GCGGTAGGCATAGGTGCAACAAGCAGCGAGTTGCGCACACCATGCTGAGCGATCTTGGCC 459355 Query 106055 TTGAGAACATCCCAGTCGTAGTTGAGCTTGGTTTCAC-CTT--CCCACATATCAAATTGA 106111 ||||| | ||||||| | || | || | ||| ||||||| || | ||| Sbjct 459356 TTGAGCTCGGCCCAGTCCCAC---AGGTCTGTAGGAGTCTTGCCCCACATGTCGTACTGA 459412 Query 106112 AGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCC 106171 ||| | ||||| || ||||| |||| | ||||| || | ||| | || || Sbjct 459413 AGCTCGCCTTGCGATACTGGAGAGCCCTGGTAAGTCTCGTATGGACCAAGCTTCTCGGCA 459472 Query 106172 AATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATC 106231 | || || ||||| || | || || || ||||| || |||||| | || | | Sbjct 459473 AGCTCGCACGAAGCCTCAAGAGCGGCATGGTAGATGGTCTCGAAGATATGGATGTTGAGC 459532 Query 106232 TCCTTGGCTTCATCTGAATCAAATG-CGTA--GCGGCACAAAATAAATACATCCGCGAGA 106288 |||||||| || || || |||| | || | || ||| | | |||| || ||| Sbjct 459533 TCCTTGGCCTCGGGCGAGTCGAATGGCATACGGAGGGCCAAGAAAG---CATCAGCAAGA 459589 Query 106289 CCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA-AC 106347 || | ||||||| ||||||||||| ||| || | || ||| || || ||| || Sbjct 459590 CCGTTGACACCCAGACCAATAGGTCGGTGACGGAAGTTGCTCTTCCGTGCC-TCTGGTAC 459648 Query 106348 GGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTC 106407 || ||| | || | || ||| ||| | || || |||| ||| |||| || Sbjct 459649 TGGGTAATAGTTGATCTCGATGGTCTTGTTCAAGTTGCGAGTGACAACCTTGGTGACCTC 459708 Query 106408 ATGAAGTTTTTCATAATC-AAAAGTGCGAGTCTCTTCATTGACA---TACTTTGGAAGGG 106463 ||||| || | | || |||| || | ||| || || || | || || | Sbjct 459709 GTGAAGCTTCTTGAAGTCGAAAACCTCG----TTTTCGATGTCAACGTATGTCGGCAGAG 459764 Query 106464 CGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTG 106523 | | || ||||| ||||| ||||| |||||| | | |||||| | ||||| | Sbjct 459765 CAAGCGAGGCCAAGTTGCAGACAGCGACCTCATCTGGTGCAGAGTACTCCATGATTTCAG 459824 Query 106524 TACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACG 106583 | |||||||| ||||| || || || || | ||||| ||||| ||||| |||| | Sbjct 459825 TGCACAAGTTCGAACTTTTGATGGTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTGGCGG 459884 Query 106584 CATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCC 106643 |||||||||| || ||| | || || || ||||| ||||| | | |||||||| | || Sbjct 459885 CATCCTTGTACAGGATGAAAGGTGTGCCAGTCTCGGTCTGGGCTTCAAGAATTGCATACC 459944 Query 106644 ACA-CATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGC-CTCGTACTTTGTGTA 106701 | | | || | ||| | || | | | ||| | ||| | | ||| || ||| Sbjct 459945 AGATCTTCTG-GGCGCGAACGGTCTCAC-GACCCTTACCTTCTCTCTCATATCGCTCGTA 460002 Query 106702 GAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAA 106761 ||| | | ||||| ||||| |||| || | || || || | || || | Sbjct 460003 GAGCTCCTTGAACTCATCACCGTAGACGTCAGACAAGCCAGGGCACTCATTGGGGCACAT 460062 Query 106762 AAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGA 106821 || | ||| || || ||| || |||| |||||| || ||||| ||||| |||| Sbjct 460063 CAGGGTCCAAGTGCCGTTCTGCTCGACGCGCTCCATGAAGAGATCTGGGATCCAAAGGGC 460122 Query 106822 TGAAAAGAGATCTCTA-CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGA 106880 | |||||||| | | ||| || | || || | || ||||| || | || | || Sbjct 460123 GTAGAAGAGATCGCGAGCACGGA-CTTCCTCCTTGCCGTGGTTCTTACGGAGGTCCATGA 460181 Query 106881 ACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC- 106939 ||| | || ||| ||||||||||||||||| |||| || | | || | | ||| Sbjct 460182 ACTGAAAGACATCGGCGTGCCATGGCTCAAGGTAGATGGCAAAGGCACC---TGGGCGCT 460238 Query 106940 -----CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAA 106994 ||| | || | || ||||| || ||| ||| | || | | ||| || | || Sbjct 460239 TGTTGCCACCCTGGTCGACGTAGCGAGCAGTGTTGTTGTACACTCTCAACATCGGTACAA 460298 Query 106995 TACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGA 107054 ||| | ||| || || || || | ||| || | | || | | || || | Sbjct 460299 GACCGTTGGATGTGCCGTTGGTGCCACCGATATAGGAACCAGTAGCACGGATATTGTGAA 460358 Query 107055 TGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCAT 107114 |||| |||||||| ||||| ||| ||||| ||||| | | || || | | Sbjct 460359 CATGCAGACCAATACCGCCAGCGTTCTTGGAGATCATAGCACATGTCTTGAGGGTGTCGT 460418 Query 107115 AGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTC 107174 |||| |||| ||| ||| ||||| |||| || | |||||| | || ||| | | Sbjct 460419 AGATGCCGTCGATGCTGTCATCCTTCATGGCAATCAAGAAGCAGGAAGCCAACTGGGCTT 460478 Query 107175 TTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGG-GACATC 107233 ||||| ||||| |||| || ||||| | || || |||| ||| | | ||||| Sbjct 460479 GCGGTGTTCCAGCGCTGAAAAGCGTTGGCGACGCATGTGTGAAG-TACTTCAGCGACATG 460537 Query 107234 TTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGC 107293 | || ||||||||| | ||| ||||| ||||| |||||||| |||| ||||||||| Sbjct 460538 TAGTTGTATGTCTCAATCGCAGCCTCAATATCTTCTCCGTGGATACCGACCGCCACACGC 460597 Query 107294 ATAAACAT 107301 || | ||| Sbjct 460598 ATGATCAT 460605 >seq31 Length=267444 Score = 116 bits (128), Expect = 4e-21 Identities = 289/436 (66%), Gaps = 12/436 (3%) Strand=Plus/Minus Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045 || || ||||| |||||||| |||||||||||||| || | || ||||| ||||| Sbjct 238991 TACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGTGAGATGTTCTCCATG 238932 Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGCACCCCAACTTGTTTGAGGA 117100 ||||| ||||| || | ||||| | | | | || || | | || | Sbjct 238931 AAGTCGAATGGGTTGGTGGCGTTGTAGAACTTCTTGTTG-----CCGAGTGCCAAAAGCA 238877 Query 117101 GACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGAT 117160 | || || | ||| |||| ||||| | ||||| ||| |||||| |||| || | Sbjct 238876 GGCGGTCGGCCACGAACTCGATGTATTGTGACATGAGACCAGCGTTCATGCCGAGAAGCT 238817 Query 117161 TACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGG 117220 | ||||| || || || || |||| | | |||||| |||| ||||| | |||| Sbjct 238816 TGCATGGCAGAGCATCTGTGAGGAACTCCTGCTCAATAGCAACTGCCTCAACGATGATGC 238757 Query 117221 CGTGGATA-GTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCAAAC 117279 || | | || | | ||| | | || ||| | ||| || ||| || Sbjct 238756 TCTGCACAAGTGCCTGATCTGGCT-TGTTCTTCAAGTGCGAGAACAGGAGACAGGCGAAG 238698 Query 117280 TCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATG 117339 || ||| | ||||||||| ||||| ||||| || || ||||| ||||| | |||| Sbjct 238697 TCTGTGTGCATACCCTCATCACGGGAGATAAGCTCGTTCGAGAATGTAAGGCCAGCCATG 238638 Query 117340 AGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCC 117399 ||||| |||||||||| ||| | || ||| ||| || ||||| |||||||||||||| Sbjct 238637 AGACCACGCTTCTTCAGCCAGAAGATGGCGGCGAAGGAACCGGAAAAGAAGATACCCTCA 238578 Query 117400 ACACACGCAAACGCAA 117415 ||| || || |||| Sbjct 238577 ACAGCGGCGAAAGCAA 238562 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589977178992840