Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09-
23] 491 sequences; 33,245,410 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq8 185 1e-41
seq31 116 4e-21
>seq8
Length=557162
Score = 185 bits (204), Expect = 1e-41
Identities = 887/1388 (64%), Gaps = 39/1388 (3%)
Strand=Plus/Plus
Query 105935 TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 105994
|||||||| ||||||| || || ||||| ||||| |||| ||| |||| ||| ||
Sbjct 459236 TAGATGTTGCTCGTGTATGGCTCGAAGCACTCATTGAAGCCCATGATCTGTGAGGTCGAT 459295
Query 105995 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCC 106054
|| || ||||| ||||| | | || ||| || | ||| | | ||| ||
Sbjct 459296 GCGGTAGGCATAGGTGCAACAAGCAGCGAGTTGCGCACACCATGCTGAGCGATCTTGGCC 459355
Query 106055 TTGAGAACATCCCAGTCGTAGTTGAGCTTGGTTTCAC-CTT--CCCACATATCAAATTGA 106111
||||| | ||||||| | || | || | ||| ||||||| || | |||
Sbjct 459356 TTGAGCTCGGCCCAGTCCCAC---AGGTCTGTAGGAGTCTTGCCCCACATGTCGTACTGA 459412
Query 106112 AGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCC 106171
||| | ||||| || ||||| |||| | ||||| || | ||| | || ||
Sbjct 459413 AGCTCGCCTTGCGATACTGGAGAGCCCTGGTAAGTCTCGTATGGACCAAGCTTCTCGGCA 459472
Query 106172 AATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATC 106231
| || || ||||| || | || || || ||||| || |||||| | || | |
Sbjct 459473 AGCTCGCACGAAGCCTCAAGAGCGGCATGGTAGATGGTCTCGAAGATATGGATGTTGAGC 459532
Query 106232 TCCTTGGCTTCATCTGAATCAAATG-CGTA--GCGGCACAAAATAAATACATCCGCGAGA 106288
|||||||| || || || |||| | || | || ||| | | |||| || |||
Sbjct 459533 TCCTTGGCCTCGGGCGAGTCGAATGGCATACGGAGGGCCAAGAAAG---CATCAGCAAGA 459589
Query 106289 CCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA-AC 106347
|| | ||||||| ||||||||||| ||| || | || ||| || || ||| ||
Sbjct 459590 CCGTTGACACCCAGACCAATAGGTCGGTGACGGAAGTTGCTCTTCCGTGCC-TCTGGTAC 459648
Query 106348 GGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTC 106407
|| ||| | || | || ||| ||| | || || |||| ||| |||| ||
Sbjct 459649 TGGGTAATAGTTGATCTCGATGGTCTTGTTCAAGTTGCGAGTGACAACCTTGGTGACCTC 459708
Query 106408 ATGAAGTTTTTCATAATC-AAAAGTGCGAGTCTCTTCATTGACA---TACTTTGGAAGGG 106463
||||| || | | || |||| || | ||| || || || | || || |
Sbjct 459709 GTGAAGCTTCTTGAAGTCGAAAACCTCG----TTTTCGATGTCAACGTATGTCGGCAGAG 459764
Query 106464 CGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTG 106523
| | || ||||| ||||| ||||| |||||| | | |||||| | ||||| |
Sbjct 459765 CAAGCGAGGCCAAGTTGCAGACAGCGACCTCATCTGGTGCAGAGTACTCCATGATTTCAG 459824
Query 106524 TACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACG 106583
| |||||||| ||||| || || || || | ||||| ||||| ||||| |||| |
Sbjct 459825 TGCACAAGTTCGAACTTTTGATGGTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTGGCGG 459884
Query 106584 CATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCC 106643
|||||||||| || ||| | || || || ||||| ||||| | | |||||||| | ||
Sbjct 459885 CATCCTTGTACAGGATGAAAGGTGTGCCAGTCTCGGTCTGGGCTTCAAGAATTGCATACC 459944
Query 106644 ACA-CATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGC-CTCGTACTTTGTGTA 106701
| | | || | ||| | || | | | ||| | ||| | | ||| || |||
Sbjct 459945 AGATCTTCTG-GGCGCGAACGGTCTCAC-GACCCTTACCTTCTCTCTCATATCGCTCGTA 460002
Query 106702 GAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAA 106761
||| | | ||||| ||||| |||| || | || || || | || || |
Sbjct 460003 GAGCTCCTTGAACTCATCACCGTAGACGTCAGACAAGCCAGGGCACTCATTGGGGCACAT 460062
Query 106762 AAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGA 106821
|| | ||| || || ||| || |||| |||||| || ||||| ||||| ||||
Sbjct 460063 CAGGGTCCAAGTGCCGTTCTGCTCGACGCGCTCCATGAAGAGATCTGGGATCCAAAGGGC 460122
Query 106822 TGAAAAGAGATCTCTA-CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGA 106880
| |||||||| | | ||| || | || || | || ||||| || | || | ||
Sbjct 460123 GTAGAAGAGATCGCGAGCACGGA-CTTCCTCCTTGCCGTGGTTCTTACGGAGGTCCATGA 460181
Query 106881 ACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC- 106939
||| | || ||| ||||||||||||||||| |||| || | | || | | |||
Sbjct 460182 ACTGAAAGACATCGGCGTGCCATGGCTCAAGGTAGATGGCAAAGGCACC---TGGGCGCT 460238
Query 106940 -----CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAA 106994
||| | || | || ||||| || ||| ||| | || | | ||| || | ||
Sbjct 460239 TGTTGCCACCCTGGTCGACGTAGCGAGCAGTGTTGTTGTACACTCTCAACATCGGTACAA 460298
Query 106995 TACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGA 107054
||| | ||| || || || || | ||| || | | || | | || || |
Sbjct 460299 GACCGTTGGATGTGCCGTTGGTGCCACCGATATAGGAACCAGTAGCACGGATATTGTGAA 460358
Query 107055 TGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCAT 107114
|||| |||||||| ||||| ||| ||||| ||||| | | || || | |
Sbjct 460359 CATGCAGACCAATACCGCCAGCGTTCTTGGAGATCATAGCACATGTCTTGAGGGTGTCGT 460418
Query 107115 AGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTC 107174
|||| |||| ||| ||| ||||| |||| || | |||||| | || ||| | |
Sbjct 460419 AGATGCCGTCGATGCTGTCATCCTTCATGGCAATCAAGAAGCAGGAAGCCAACTGGGCTT 460478
Query 107175 TTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGG-GACATC 107233
||||| ||||| |||| || ||||| | || || |||| ||| | | |||||
Sbjct 460479 GCGGTGTTCCAGCGCTGAAAAGCGTTGGCGACGCATGTGTGAAG-TACTTCAGCGACATG 460537
Query 107234 TTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGC 107293
| || ||||||||| | ||| ||||| ||||| |||||||| |||| |||||||||
Sbjct 460538 TAGTTGTATGTCTCAATCGCAGCCTCAATATCTTCTCCGTGGATACCGACCGCCACACGC 460597
Query 107294 ATAAACAT 107301
|| | |||
Sbjct 460598 ATGATCAT 460605
>seq31
Length=267444
Score = 116 bits (128), Expect = 4e-21
Identities = 289/436 (66%), Gaps = 12/436 (3%)
Strand=Plus/Minus
Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045
|| || ||||| |||||||| |||||||||||||| || | || ||||| |||||
Sbjct 238991 TACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGTGAGATGTTCTCCATG 238932
Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGCACCCCAACTTGTTTGAGGA 117100
||||| ||||| || | ||||| | | | | || || | | || |
Sbjct 238931 AAGTCGAATGGGTTGGTGGCGTTGTAGAACTTCTTGTTG-----CCGAGTGCCAAAAGCA 238877
Query 117101 GACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGAT 117160
| || || | ||| |||| ||||| | ||||| ||| |||||| |||| || |
Sbjct 238876 GGCGGTCGGCCACGAACTCGATGTATTGTGACATGAGACCAGCGTTCATGCCGAGAAGCT 238817
Query 117161 TACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGG 117220
| ||||| || || || || |||| | | |||||| |||| ||||| | ||||
Sbjct 238816 TGCATGGCAGAGCATCTGTGAGGAACTCCTGCTCAATAGCAACTGCCTCAACGATGATGC 238757
Query 117221 CGTGGATA-GTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCAAAC 117279
|| | | || | | ||| | | || ||| | ||| || ||| ||
Sbjct 238756 TCTGCACAAGTGCCTGATCTGGCT-TGTTCTTCAAGTGCGAGAACAGGAGACAGGCGAAG 238698
Query 117280 TCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATG 117339
|| ||| | ||||||||| ||||| ||||| || || ||||| ||||| | ||||
Sbjct 238697 TCTGTGTGCATACCCTCATCACGGGAGATAAGCTCGTTCGAGAATGTAAGGCCAGCCATG 238638
Query 117340 AGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCC 117399
||||| |||||||||| ||| | || ||| ||| || ||||| ||||||||||||||
Sbjct 238637 AGACCACGCTTCTTCAGCCAGAAGATGGCGGCGAAGGAACCGGAAAAGAAGATACCCTCA 238578
Query 117400 ACACACGCAAACGCAA 117415
||| || || ||||
Sbjct 238577 ACAGCGGCGAAAGCAA 238562
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589977178992840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |