Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09-
23] 491 sequences; 33,245,410 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq25 100 2e-16
seq64 86.0 4e-12
seq12 84.2 1e-11
>seq25
Length=313491
Score = 100 bits (110), Expect = 2e-16
Identities = 138/193 (72%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849
||| ||||| ||||| ||||| ||| | || |||| || ||||| || ||||| ||
Sbjct 101499 TTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAA 101558
Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909
|| || || |||||||| | || | ||||||||||| ||||||| ||||||
Sbjct 101559 GATCAGGCGCTGCTGGTCGGGTGGGATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTT 101618
Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969
| |||| || | |||||| |||| ||| ||||| || || || | ||||| ||
Sbjct 101619 GTCAATCGTGTCCGACGACTCAACCTCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTGAC 101678
Query 34970 AAAGATCTGCATA 34982
||||||||||||
Sbjct 101679 GAAGATCTGCATA 101691
>seq64
Length=168546
Score = 86.0 bits (94), Expect = 4e-12
Identities = 138/195 (71%), Gaps = 9/195 (5%)
Strand=Plus/Minus
Query 34794 TTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATT 34853
||||||||||| |||||||| || | || |||| || ||||| |||||||| || ||
Sbjct 20794 TTCTGAATGTTGTAGTCCGACAGAGTGCGGCCATCTTCAAGCTGCTTTCCGGCGAAGATC 20735
Query 34854 AGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT 34913
| || |||||||| | || | ||||||||||| ||||| ||||| || |
Sbjct 20734 AAACGCTGCTGGTCCGGTGGAATGCCCTCCTTGTCTTGGATCTTGCTCTTGAC--AT--T 20679
Query 34914 ATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969
||||| || | | ||| || |||| || ||||| || || ||||| ||||| ||
Sbjct 20678 GTCGATGGTGTCGCTAGACTCGACTTCGAGCGTGATGGTCTTGCCAGTGAGGGTCTTTAC 20619
Query 34970 AAAGATCTGC-ATAT 34983
||| | ||| ||||
Sbjct 20618 GAAGCTGTGCGATAT 20604
>seq12
Length=397188
Score = 84.2 bits (92), Expect = 1e-11
Identities = 81/104 (78%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 34785 GTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCG 34844
||||| || ||||| ||||| |||||||| ||| | || |||| || ||||| || |||
Sbjct 53206 GTGCTCTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCG 53265
Query 34845 GCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888
|| || || || || |||||||| | || | ||||||||||||
Sbjct 53266 GCGAAGATCAGGCGCTGCTGGTCCGGTGGGATCCCCTCCTTGTC 53309
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324631657372248
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |