Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09-
23] 491 sequences; 33,245,410 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq8 242 7e-59
seq31 168 1e-36
>seq8
Length=557162
Score = 242 bits (268), Expect = 7e-59
Identities = 1268/1981 (64%), Gaps = 67/1981 (3%)
Strand=Plus/Plus
Query 212697 TTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTATGATATCT 212756
|||| | |||| ||| || ||||| | | | |||||| ||||| | | ||| |
Sbjct 458984 TTCAAGCTCTGAGACTGATCGATGAAGGCACCACGGTCAGCAGCCATCTGGACGATGTTA 459043
Query 212757 CTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAAGCCGGGG 212816
| |||| || |||||| ||||||||| | | | | |||||||| ||||||| | |||
Sbjct 459044 CGCTGGCTGATCTCCCAGACGGTCTTGTAAAGTGCCTTGAGGTCATCTGGGATGTTGGGA 459103
Query 212817 ATGTTCTGCACAGACCCCCTGTGTATGGTCA--GCTGCAGGCG--CATGTCCTCGTTCCA 212872
||| ||| | || || || ||| | || | ||| | ||||| ||| |||
Sbjct 459104 ATGCGCTGGATGGAACC---GT-TATCGGCAATGATGCGGTTCTTCATGTTCTCAGACCA 459159
Query 212873 GAGGCCCCTGGTCTCCAGGCAC-TTGACCAGGTGAGGGTTGACTATCTGGAAGTCACCTG 212931
|| || | |||| || | | || | ||| |||||||| | |||||| || || |
Sbjct 459160 CAGACCAC-GGTCGACAAGATCCTTCAGCAGCCATGGGTTGACGACCTGGAACTCGCCGG 459218
Query 212932 AGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCCA 212991
| || | | ||| | ||| ||||| ||||||| || ||| ||| ||||
Sbjct 459219 CCAAGACACGACGGGAGTAGATGTTGCTCGTGTATGGCTCGAAGCACTCATTGAAGCCCA 459278
Query 212992 GAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCCGT 213051
||||||| || || || ||||| || || || || || ||| | ||| || |
Sbjct 459279 TGATCTGTGAGGTCGATGCGGTAGGCATAGGTGCAACAAGCAGCGAGTTGCGCACACCAT 459338
Query 213052 GCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTCCTCGTCCT 213111
||| |||| | | ||||| ||||||||||| | | | ||| ||| |
Sbjct 459339 GCTGAGCGATCTTGGCCTTGAGCTCGGCCCAGTCCCACAGGTCTGT-AGGA----GTCTT 459393
Query 213112 TCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTC-ACGGGGCTGCCCTGGTAAGAG 213170
| | |||||||| |||| ||| | | |||| || || |||||||||||
Sbjct 459394 GCCC----CACATGTCGTACTG-AAGCTCGCCTTGCGATACTGGAGAGCCCTGGTAAGTC 459448
Query 213171 GAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATG 213230
||| || ||| ||| || ||| |||||||| || |||| || || || | |||||||
Sbjct 459449 TCGTATGGACCAAGCTTCTCGGCAAGCTCGCACGAAGCCTCAAGAGCGGCATGGTAGATG 459508
Query 213231 GTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATG 213290
|| || || || | ||||||||| ||||||||| || || ||| ||||| | |
Sbjct 459509 GTCTCGAAGATATGGATGTTGAGCTCCTTGGCCTCGGGCGAGTCGAATGGCATACGGAGG 459568
Query 213291 CGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTA 213350
||| ||||||| || || | ||| || | || || |||| ||| | | |||
Sbjct 459569 GCCAAGAAAGCATCAGCAAGACCGTTGACACCCAGACCAATAGGTCGGTGACGGAAGTTG 459628
Query 213351 GACTT-GGAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCG 213409
||| | || ||| | |||||| ||||| |||||| ||||||| | ||||||
Sbjct 459629 CTCTTCCGTGC-CTCTGGTACTGGGTAATAGTTGATCTCGATGGTCTTGTTCAAGTTGCG 459687
Query 213410 GGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTCCTG 213469
||| | || |||||||| | | || | || | | ||| || | | || |
Sbjct 459688 AGTGACAACCTTGGTGACCTCGTGAAGCTTCTTGAAGTCGAAAACCTCGTTTTCGATGTC 459747
Query 213470 CACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGT 213529
|| | ||||| || | ||||| |||||| || || ||||| | | | |
Sbjct 459748 AACGTATGTCGGCAGAGCAAGCGAGGCCAAGTTGCAGACAGCGACCTCATCTGGTGCAGA 459807
Query 213530 GTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTT 213589
|||||||||||| || ||||||| ||| | | ||||||||| ||||||| |||||
Sbjct 459808 GTACTCCATGATTTCAGTGCACAAGTTCGAACTTTTGATGGTGCCAAGGTTCTTCTGGTT 459867
Query 213590 TGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGA 213649
||| |||||| | ||||||||| || ||| | || | || ||||| |||||
Sbjct 459868 GCTCTTGCGGTTGGCGGCATCCTTGTACAGGATGAAAGGTGTGCCAGTCTCGGTCTGGGC 459927
Query 213650 CACCAGTATCTGGCT-CCAGAGGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCG 213708
| || || || | ||||| | | ||| | | | | || || | | |
Sbjct 459928 TTCAAGAAT-TGCATACCAGATCTTCTGGGC----GCGAACGGTCTCACGACCCTTACCT 459982
Query 213709 TAGC-CTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGAC-CCTGTCCAGTCC 213766
| | ||| || | ||||||||||| ||||| || | || |||| | | | || ||
Sbjct 459983 TCTCTCTCATATCGCTCGTAGAGCTCCTTGAACTCATCACCGTAGACGTCAGACAAG-CC 460041
Query 213767 CGGACAGGATGCGGGACACATGAGGCTCC-AGTCCCCGTCATCTCTGACTCTCTGCATGA 213825
|| || ||| ||||| ||| ||| ||| || || ||| ||| | || |||||
Sbjct 460042 AGGGCACTCATTGGGGCACATCAGGGTCCAAGTGCCGTTCTGCTC-GACGCGCTCCATGA 460100
Query 213826 ACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAG 213885
| || || |||| ||| || ||| ||| || || | | | || ||| ||
Sbjct 460101 AGAGATCTGGGATCCAAAGGGCGTAGAAGAGATCGCGAGCACGGACTTCCTCCTTGCCGT 460160
Query 213886 AGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGG 213945
||| || || || || | || | ||||| || |||||||| ||||| | ||||||||
Sbjct 460161 GGTTCTTACGGAGGTCCATGAACTGAAAGACATCGGCGTGCCATGGCTCAAGGTAGATGG 460220
Query 213946 CAAAGGCGCCCG---GCCTCTTGCCGCCCTGGTCCACCAGCCTGGCCACCA----TGTTG 213998
||||||| || | || | ||||| |||||||| | | | || | || |||||
Sbjct 460221 CAAAGGCACCTGGGCGCTTGTTGCCACCCTGGTCGA----CGTAGCGAGCAGTGTTGTTG 460276
Query 213999 AAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGT-CCGTTGGTTCCCGCTATATACGA 214057
| | | || | ||||| || |||||||| ||| |||||||| || | ||||| ||
Sbjct 460277 TACACTCTCAACATCGGTACAAGACCGTTGGA-TGTGCCGTTGGTGCCACCGATATAGGA 460335
Query 214058 GCCGGAGGCCCTCAGGT--TGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATC 214115
|| | || | | | || |||| ||| || || || || |||| ||||||||||
Sbjct 460336 ACCAGTAGCACGGATATTGTGAACATGCAGA--CCAATACCGCCAGCGTTCTTGGAGATC 460393
Query 214116 ATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGC 214175
|| || || | | | || || ||||||| | ||||||||||| | | | | |
Sbjct 460394 ATAGCACATGTCTTGAGGGTGTCGTAGATGCCGTCGATGCTGTCATCCTTCATGGCAATC 460453
Query 214176 AAGAAGCAGCTCGAGAGCTGGGGCCTG-GACGAGCCAGAGTTGAAAAGCGTGGGGCTGGC 214234
||||||||| | | || |||| || | | |||| | |||||||||| || ||
Sbjct 460454 AAGAAGCAGGAAGCCAACT-GGGCTTGCGGTGTTCCAGCGCTGAAAAGCGTTGGCGACGC 460512
Query 214235 ATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCAGGACTGAGGGGATGTCGTG 214294
||| | | |||| || | | |||| ||||| | | | || || |
Sbjct 460513 ATGTGTGAAGTACTTCAGCGACATGTAGTTGTATGTCTCAATCGCAGCCTCAATATCTTC 460572
Query 214295 CTTGTGGATCTGTAGAGCGCAC-CTCATCAGCATGTGCTGGGGCCTCTCTATGGGTCCTT 214353
|||||| | || ||| | ||| | ||| ||||| || ||||| | | ||||
Sbjct 460573 TCCGTGGATACCGACCGC-CACACGCATGATCATCTGCTGCGG--TCTCTCAGCGACCTT 460629
Query 214354 TGGGGCCCT--TGAGCAGGTAGGAGCGCTCCAGAGTCTTGAACCCAAAGTAGGAGTAGGT 214411
| | | |||| ||||| || ||||||||||||||||| || ||||| |||| |
Sbjct 460630 GCCGTCGATTCTGAGAAGGTATGATCGCTCCAGAGTCTTGAAGCCGAAGTACTGGTAGTT 460689
Query 214412 ATGATCGTTCCCGTGTATGAGGGCAGCGTCCAGCTCTTCCGCGTGC-TCTTGGCTCAGCT 214470
||| ||| | | ||| | || ||||| |||| |||| || || || |
Sbjct 460690 GAAGTCGCGGTCGTAGACAATGGCCGAGTTGAGCTCGTCCGAGTGCTTCATGACT---GT 460746
Query 214471 TGAAAA--TCTCGTCCGAGATCAAGGGAGCCTCCACGTCCAAGTCCGGGTTAATGTTTTT 214528
|| | | ||||||| ||||||| ||| |||| | || | ||||| |||| |
Sbjct 460747 TGCATACGTCTCGTCTGAGATCATGGGGGCCTTTTTGCCCGTCTTTGGGTTGATGTATGC 460806
Query 214529 CCAGAGCTTTTCGCATGTCT-TTGAGAACTCCGGGACGGTCTGCAGGTGCAGGTTGGACA 214587
| || | | | ||| || ||||||| | ||||||| ||| ||||| ||||
Sbjct 460807 GTATAGATCAT-GGATGACTGCCGAGAACTGCTTCTTGGTCTGCTTGTGGAGGTTCGACA 460865
Query 214588 CCGAGACCTTGGCAGCCAGGAGCCCGTAGTTTGGGTGCTTGGTGGTCATGCTGGCCGCGG 214647
| | || ||| || |||| | | |||| |||||| | ||||||| || ||||
Sbjct 460866 CGGCGATGCGGGCGGCGAGGATCGCATAGTCTGGGTGAGTAACGGTCATGTATGCAGCGG 460925
Query 214648 T 214648
|
Sbjct 460926 T 460926
>seq31
Length=267444
Score = 168 bits (186), Expect = 1e-36
Identities = 490/744 (66%), Gaps = 33/744 (4%)
Strand=Plus/Minus
Query 47840 TGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCC 47899
||||| || || || | ||||| |||||||| ||||| || ||| ||||||||||||
Sbjct 238994 TGGTACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGTGAGATGTTCTCC 238935
Query 47900 ATGAAGAGGAAGGGGTTGGGTGTGTTATACACC--CGTGTCAGGCCCATCTGTTCC---A 47954
|||||| ||| ||||||| | ||| || | | | ||| ||| | || || |
Sbjct 238934 ATGAAGTCGAATGGGTTGGTGGCGTTGTAGAACTTCTTGT--TGCCGA---GTGCCAAAA 238880
Query 47955 GCAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGA 48014
||||| | || || ||| |||||||||||| ||||||||| ||||||||| | |
Sbjct 238879 GCAGGCGGTCGGCCACGAACTCGATGTATTGTGACATGAGACCAGCGTTCATGCCGAGAA 238820
Query 48015 GGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAA 48074
| |||| ||| | |||||| ||||||| ||| || ||| || || | || |
Sbjct 238819 GCTTGCATGGCAGAGCATCTGTGAGGAACTCCTGCTCAAT-AGCA--ACTGCCTCAACGA 238763
Query 48075 T-CTGCTTAACGCGGGACTCTGA--GGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGC 48131
| |||| | | | |||| || ||||| || |||| | | || | |
Sbjct 238762 TGATGCTCTGCACAAGTGCCTGATCTGGCTTGTTCTTCAAGTGC---GAGAACAGGAGAC 238706
Query 48132 AGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGAC 48191
|||| ||||| |||||| || || || ||| ||| ||| |||| ||||| || |
Sbjct 238705 AGGCGAAGTCTGTGTGCATACCCTCATCACGGGAGATAAGCTCGTTCGAGAATGTAAGGC 238646
Query 48192 CAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGA 48251
||| ||||| || | || || |||||||| || || ||||| || || || |||||||
Sbjct 238645 CAGCCATGAGACCACGCTTCTTCAGCCAGAAGATGGCGGCGAAGGAACCGGAAAAGAAGA 238586
Query 48252 TGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTC----TCCGAAAGAAGCGTTCTTGTCT 48307
| ||||| || || ||||| || | || || |||| | | || |||||
Sbjct 238585 TACCCTCAACAGCGGCGAAAGC----AACCAATCGGAGGGCGAATGTGGAATTTTTGTCC 238530
Query 48308 GAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCC 48367
|||||||| | ||||||||| |||||||| |||||| || || | || |||||
Sbjct 238529 GAGATCCATCGCAACGCCCAGTCAGCCTTCTTACGGATGCACGGGATGTTATCGATGGCG 238470
Query 48368 CGGAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCTTTGCG 48424
||| || | | | || || || | ||| || | | || || | |
Sbjct 238469 TTGAACAGATATGTTCGCTGCTTTGGCTCGCTGATATATGTGTCAATAAGGAG---GGAG 238413
Query 48425 TACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCA 48484
|| | || ||||| | ||||| || ||||||||| || |||||| | |||||
Sbjct 238412 TATGTTTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCATAGAAGCATCGTGCCTCT 238353
Query 48485 AACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAA 48544
| ||| || || | | ||| | ||| | || ||||| ||||| || || |||||
Sbjct 238352 GGGATCTGAACCTCAGAGCTGAAGCGCTCGACAAGGTTCTCGTTGACAATGCCGTCTGAT 238293
Query 48545 GCAGCAAAGAAGGCAAGGACATGT 48568
|| || ||||| || || || |||
Sbjct 238292 GCTGCGAAGAAAGCGAGAACGTGT 238269
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931527082717440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |