Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09- 23] 491 sequences; 33,245,410 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq8 242 7e-59 seq31 168 1e-36 >seq8 Length=557162 Score = 242 bits (268), Expect = 7e-59 Identities = 1268/1981 (64%), Gaps = 67/1981 (3%) Strand=Plus/Plus Query 212697 TTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTATGATATCT 212756 |||| | |||| ||| || ||||| | | | |||||| ||||| | | ||| | Sbjct 458984 TTCAAGCTCTGAGACTGATCGATGAAGGCACCACGGTCAGCAGCCATCTGGACGATGTTA 459043 Query 212757 CTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAAGCCGGGG 212816 | |||| || |||||| ||||||||| | | | | |||||||| ||||||| | ||| Sbjct 459044 CGCTGGCTGATCTCCCAGACGGTCTTGTAAAGTGCCTTGAGGTCATCTGGGATGTTGGGA 459103 Query 212817 ATGTTCTGCACAGACCCCCTGTGTATGGTCA--GCTGCAGGCG--CATGTCCTCGTTCCA 212872 ||| ||| | || || || ||| | || | ||| | ||||| ||| ||| Sbjct 459104 ATGCGCTGGATGGAACC---GT-TATCGGCAATGATGCGGTTCTTCATGTTCTCAGACCA 459159 Query 212873 GAGGCCCCTGGTCTCCAGGCAC-TTGACCAGGTGAGGGTTGACTATCTGGAAGTCACCTG 212931 || || | |||| || | | || | ||| |||||||| | |||||| || || | Sbjct 459160 CAGACCAC-GGTCGACAAGATCCTTCAGCAGCCATGGGTTGACGACCTGGAACTCGCCGG 459218 Query 212932 AGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCCA 212991 | || | | ||| | ||| ||||| ||||||| || ||| ||| |||| Sbjct 459219 CCAAGACACGACGGGAGTAGATGTTGCTCGTGTATGGCTCGAAGCACTCATTGAAGCCCA 459278 Query 212992 GAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCCGT 213051 ||||||| || || || ||||| || || || || || ||| | ||| || | Sbjct 459279 TGATCTGTGAGGTCGATGCGGTAGGCATAGGTGCAACAAGCAGCGAGTTGCGCACACCAT 459338 Query 213052 GCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTCCTCGTCCT 213111 ||| |||| | | ||||| ||||||||||| | | | ||| ||| | Sbjct 459339 GCTGAGCGATCTTGGCCTTGAGCTCGGCCCAGTCCCACAGGTCTGT-AGGA----GTCTT 459393 Query 213112 TCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTC-ACGGGGCTGCCCTGGTAAGAG 213170 | | |||||||| |||| ||| | | |||| || || ||||||||||| Sbjct 459394 GCCC----CACATGTCGTACTG-AAGCTCGCCTTGCGATACTGGAGAGCCCTGGTAAGTC 459448 Query 213171 GAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATG 213230 ||| || ||| ||| || ||| |||||||| || |||| || || || | ||||||| Sbjct 459449 TCGTATGGACCAAGCTTCTCGGCAAGCTCGCACGAAGCCTCAAGAGCGGCATGGTAGATG 459508 Query 213231 GTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATG 213290 || || || || | ||||||||| ||||||||| || || ||| ||||| | | Sbjct 459509 GTCTCGAAGATATGGATGTTGAGCTCCTTGGCCTCGGGCGAGTCGAATGGCATACGGAGG 459568 Query 213291 CGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTA 213350 ||| ||||||| || || | ||| || | || || |||| ||| | | ||| Sbjct 459569 GCCAAGAAAGCATCAGCAAGACCGTTGACACCCAGACCAATAGGTCGGTGACGGAAGTTG 459628 Query 213351 GACTT-GGAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCG 213409 ||| | || ||| | |||||| ||||| |||||| ||||||| | |||||| Sbjct 459629 CTCTTCCGTGC-CTCTGGTACTGGGTAATAGTTGATCTCGATGGTCTTGTTCAAGTTGCG 459687 Query 213410 GGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTCCTG 213469 ||| | || |||||||| | | || | || | | ||| || | | || | Sbjct 459688 AGTGACAACCTTGGTGACCTCGTGAAGCTTCTTGAAGTCGAAAACCTCGTTTTCGATGTC 459747 Query 213470 CACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGT 213529 || | ||||| || | ||||| |||||| || || ||||| | | | | Sbjct 459748 AACGTATGTCGGCAGAGCAAGCGAGGCCAAGTTGCAGACAGCGACCTCATCTGGTGCAGA 459807 Query 213530 GTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTT 213589 |||||||||||| || ||||||| ||| | | ||||||||| ||||||| ||||| Sbjct 459808 GTACTCCATGATTTCAGTGCACAAGTTCGAACTTTTGATGGTGCCAAGGTTCTTCTGGTT 459867 Query 213590 TGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGA 213649 ||| |||||| | ||||||||| || ||| | || | || ||||| ||||| Sbjct 459868 GCTCTTGCGGTTGGCGGCATCCTTGTACAGGATGAAAGGTGTGCCAGTCTCGGTCTGGGC 459927 Query 213650 CACCAGTATCTGGCT-CCAGAGGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCG 213708 | || || || | ||||| | | ||| | | | | || || | | | Sbjct 459928 TTCAAGAAT-TGCATACCAGATCTTCTGGGC----GCGAACGGTCTCACGACCCTTACCT 459982 Query 213709 TAGC-CTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGAC-CCTGTCCAGTCC 213766 | | ||| || | ||||||||||| ||||| || | || |||| | | | || || Sbjct 459983 TCTCTCTCATATCGCTCGTAGAGCTCCTTGAACTCATCACCGTAGACGTCAGACAAG-CC 460041 Query 213767 CGGACAGGATGCGGGACACATGAGGCTCC-AGTCCCCGTCATCTCTGACTCTCTGCATGA 213825 || || ||| ||||| ||| ||| ||| || || ||| ||| | || ||||| Sbjct 460042 AGGGCACTCATTGGGGCACATCAGGGTCCAAGTGCCGTTCTGCTC-GACGCGCTCCATGA 460100 Query 213826 ACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAG 213885 | || || |||| ||| || ||| ||| || || | | | || ||| || Sbjct 460101 AGAGATCTGGGATCCAAAGGGCGTAGAAGAGATCGCGAGCACGGACTTCCTCCTTGCCGT 460160 Query 213886 AGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGG 213945 ||| || || || || | || | ||||| || |||||||| ||||| | |||||||| Sbjct 460161 GGTTCTTACGGAGGTCCATGAACTGAAAGACATCGGCGTGCCATGGCTCAAGGTAGATGG 460220 Query 213946 CAAAGGCGCCCG---GCCTCTTGCCGCCCTGGTCCACCAGCCTGGCCACCA----TGTTG 213998 ||||||| || | || | ||||| |||||||| | | | || | || ||||| Sbjct 460221 CAAAGGCACCTGGGCGCTTGTTGCCACCCTGGTCGA----CGTAGCGAGCAGTGTTGTTG 460276 Query 213999 AAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGT-CCGTTGGTTCCCGCTATATACGA 214057 | | | || | ||||| || |||||||| ||| |||||||| || | ||||| || Sbjct 460277 TACACTCTCAACATCGGTACAAGACCGTTGGA-TGTGCCGTTGGTGCCACCGATATAGGA 460335 Query 214058 GCCGGAGGCCCTCAGGT--TGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATC 214115 || | || | | | || |||| ||| || || || || |||| |||||||||| Sbjct 460336 ACCAGTAGCACGGATATTGTGAACATGCAGA--CCAATACCGCCAGCGTTCTTGGAGATC 460393 Query 214116 ATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGC 214175 || || || | | | || || ||||||| | ||||||||||| | | | | | Sbjct 460394 ATAGCACATGTCTTGAGGGTGTCGTAGATGCCGTCGATGCTGTCATCCTTCATGGCAATC 460453 Query 214176 AAGAAGCAGCTCGAGAGCTGGGGCCTG-GACGAGCCAGAGTTGAAAAGCGTGGGGCTGGC 214234 ||||||||| | | || |||| || | | |||| | |||||||||| || || Sbjct 460454 AAGAAGCAGGAAGCCAACT-GGGCTTGCGGTGTTCCAGCGCTGAAAAGCGTTGGCGACGC 460512 Query 214235 ATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCAGGACTGAGGGGATGTCGTG 214294 ||| | | |||| || | | |||| ||||| | | | || || | Sbjct 460513 ATGTGTGAAGTACTTCAGCGACATGTAGTTGTATGTCTCAATCGCAGCCTCAATATCTTC 460572 Query 214295 CTTGTGGATCTGTAGAGCGCAC-CTCATCAGCATGTGCTGGGGCCTCTCTATGGGTCCTT 214353 |||||| | || ||| | ||| | ||| ||||| || ||||| | | |||| Sbjct 460573 TCCGTGGATACCGACCGC-CACACGCATGATCATCTGCTGCGG--TCTCTCAGCGACCTT 460629 Query 214354 TGGGGCCCT--TGAGCAGGTAGGAGCGCTCCAGAGTCTTGAACCCAAAGTAGGAGTAGGT 214411 | | | |||| ||||| || ||||||||||||||||| || ||||| |||| | Sbjct 460630 GCCGTCGATTCTGAGAAGGTATGATCGCTCCAGAGTCTTGAAGCCGAAGTACTGGTAGTT 460689 Query 214412 ATGATCGTTCCCGTGTATGAGGGCAGCGTCCAGCTCTTCCGCGTGC-TCTTGGCTCAGCT 214470 ||| ||| | | ||| | || ||||| |||| |||| || || || | Sbjct 460690 GAAGTCGCGGTCGTAGACAATGGCCGAGTTGAGCTCGTCCGAGTGCTTCATGACT---GT 460746 Query 214471 TGAAAA--TCTCGTCCGAGATCAAGGGAGCCTCCACGTCCAAGTCCGGGTTAATGTTTTT 214528 || | | ||||||| ||||||| ||| |||| | || | ||||| |||| | Sbjct 460747 TGCATACGTCTCGTCTGAGATCATGGGGGCCTTTTTGCCCGTCTTTGGGTTGATGTATGC 460806 Query 214529 CCAGAGCTTTTCGCATGTCT-TTGAGAACTCCGGGACGGTCTGCAGGTGCAGGTTGGACA 214587 | || | | | ||| || ||||||| | ||||||| ||| ||||| |||| Sbjct 460807 GTATAGATCAT-GGATGACTGCCGAGAACTGCTTCTTGGTCTGCTTGTGGAGGTTCGACA 460865 Query 214588 CCGAGACCTTGGCAGCCAGGAGCCCGTAGTTTGGGTGCTTGGTGGTCATGCTGGCCGCGG 214647 | | || ||| || |||| | | |||| |||||| | ||||||| || |||| Sbjct 460866 CGGCGATGCGGGCGGCGAGGATCGCATAGTCTGGGTGAGTAACGGTCATGTATGCAGCGG 460925 Query 214648 T 214648 | Sbjct 460926 T 460926 >seq31 Length=267444 Score = 168 bits (186), Expect = 1e-36 Identities = 490/744 (66%), Gaps = 33/744 (4%) Strand=Plus/Minus Query 47840 TGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCC 47899 ||||| || || || | ||||| |||||||| ||||| || ||| |||||||||||| Sbjct 238994 TGGTACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGTGAGATGTTCTCC 238935 Query 47900 ATGAAGAGGAAGGGGTTGGGTGTGTTATACACC--CGTGTCAGGCCCATCTGTTCC---A 47954 |||||| ||| ||||||| | ||| || | | | ||| ||| | || || | Sbjct 238934 ATGAAGTCGAATGGGTTGGTGGCGTTGTAGAACTTCTTGT--TGCCGA---GTGCCAAAA 238880 Query 47955 GCAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGA 48014 ||||| | || || ||| |||||||||||| ||||||||| ||||||||| | | Sbjct 238879 GCAGGCGGTCGGCCACGAACTCGATGTATTGTGACATGAGACCAGCGTTCATGCCGAGAA 238820 Query 48015 GGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAA 48074 | |||| ||| | |||||| ||||||| ||| || ||| || || | || | Sbjct 238819 GCTTGCATGGCAGAGCATCTGTGAGGAACTCCTGCTCAAT-AGCA--ACTGCCTCAACGA 238763 Query 48075 T-CTGCTTAACGCGGGACTCTGA--GGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGC 48131 | |||| | | | |||| || ||||| || |||| | | || | | Sbjct 238762 TGATGCTCTGCACAAGTGCCTGATCTGGCTTGTTCTTCAAGTGC---GAGAACAGGAGAC 238706 Query 48132 AGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGAC 48191 |||| ||||| |||||| || || || ||| ||| ||| |||| ||||| || | Sbjct 238705 AGGCGAAGTCTGTGTGCATACCCTCATCACGGGAGATAAGCTCGTTCGAGAATGTAAGGC 238646 Query 48192 CAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGA 48251 ||| ||||| || | || || |||||||| || || ||||| || || || ||||||| Sbjct 238645 CAGCCATGAGACCACGCTTCTTCAGCCAGAAGATGGCGGCGAAGGAACCGGAAAAGAAGA 238586 Query 48252 TGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTC----TCCGAAAGAAGCGTTCTTGTCT 48307 | ||||| || || ||||| || | || || |||| | | || ||||| Sbjct 238585 TACCCTCAACAGCGGCGAAAGC----AACCAATCGGAGGGCGAATGTGGAATTTTTGTCC 238530 Query 48308 GAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCC 48367 |||||||| | ||||||||| |||||||| |||||| || || | || ||||| Sbjct 238529 GAGATCCATCGCAACGCCCAGTCAGCCTTCTTACGGATGCACGGGATGTTATCGATGGCG 238470 Query 48368 CGGAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCTTTGCG 48424 ||| || | | | || || || | ||| || | | || || | | Sbjct 238469 TTGAACAGATATGTTCGCTGCTTTGGCTCGCTGATATATGTGTCAATAAGGAG---GGAG 238413 Query 48425 TACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCA 48484 || | || ||||| | ||||| || ||||||||| || |||||| | ||||| Sbjct 238412 TATGTTTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCATAGAAGCATCGTGCCTCT 238353 Query 48485 AACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAA 48544 | ||| || || | | ||| | ||| | || ||||| ||||| || || ||||| Sbjct 238352 GGGATCTGAACCTCAGAGCTGAAGCGCTCGACAAGGTTCTCGTTGACAATGCCGTCTGAT 238293 Query 48545 GCAGCAAAGAAGGCAAGGACATGT 48568 || || ||||| || || || ||| Sbjct 238292 GCTGCGAAGAAAGCGAGAACGTGT 238269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931527082717440