Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09-
23] 491 sequences; 33,245,410 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq8 178 2e-39
seq31 161 2e-34
>seq8
Length=557162
Score = 178 bits (196), Expect = 2e-39
Identities = 722/1113 (65%), Gaps = 45/1113 (4%)
Strand=Plus/Plus
Query 221371 GTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAAGACTGCGTCAGG-GCAGCGT 221429
||| | |||||| ||||| | ||||| | |||| || || ||| | || || |
Sbjct 459442 GTAAGTCTCGTATGGACCAAGCTTCTCGGCAAGCTCGCACGAA-GCCTCAAGAGCGGCAT 459500
Query 221430 GGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAAGTGAAGGGCA 221489
||||||||||||| ||||| ||||||| |||||||||||| || ||| ||||
Sbjct 459501 GGTAGATGGTCTCGAAGATATGGATGTTGAGCTCCTTGGCCTCGGGCGAGTCGAATGGCA 459560
Query 221490 TACGCAGCATCT-GAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGGCCTGTGT 221548
|||| || | ||||| | || || || || | || || | ||| || || | |||
Sbjct 459561 TACGGAGGGCCAAGAAAG-CATCAGCAAGACCGTTGACACCCAGACCAATAGGTCGGTGA 459619
Query 221549 CTCCTGTTGGAAGCGGCCG--CTTCTGGCACGGGATAAAAGTTGACGTCGATCAGATTGT 221606
| |||| | ||| | ||||| || || ||| |||||| ||||| ||||
Sbjct 459620 CGGAAGTTGCT--CTTCCGTGCCTCTGGTACTGGGTAATAGTTGATCTCGATGGTCTTGT 459677
Query 221607 TGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAACACCAACT 221666
| | ||| |||||| || || |||||| ||||||| | | ||| |||
Sbjct 459678 TCAAGTTGCGAGTGACAACCTTGGTGACCTCGTGAAGCTTCTTGAAGTCGAAAACCT--- 459734
Query 221667 CGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCAGGTTACACA 221726
||| | || | || || | | || |||| ||||| ||| || |
Sbjct 459735 ------CGTTTTCGATG---TCAACGTATGTCGGCAGAGCAAGCGAGGCCAAGTTGCAGA 459785
Query 221727 CGGCCACCTCGTCCTTGTTG--GTATACTGTATGATCTCTGTACAGAGGTTGCTGCACTT 221784
| || ||||| || || || | |||| ||||| || || || | ||| | ||
Sbjct 459786 CAGCGACCTCATC--TGGTGCAGAGTACTCCATGATTTCAGTGCACAAGTTCGAACTTTT 459843
Query 221785 GATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAA 221844
|||||| || |||| || || || |||||| ||||| || |||||||| || || ||
Sbjct 459844 GATGGTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTGGCGGCATCCTTGTACAGGATGAA 459903
Query 221845 GGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTGG-CGCTCA 221903
|| ||||||||| ||| || | ||||| | ||||| | ||||| ||| |
Sbjct 459904 AGGTGTGCCAGTCTCGGTCTGGGCTTCAAGAATTGCATACCAGATCT-TCTGGGCGCGAA 459962
Query 221904 CCGTCCTCTTGACTGCACCCTCGGTCTTT-TCATACCCGGTATAGAGCATGTCAAACTTT 221962
| ||| || ||| ||| ||| | ||||| | |||||| | ||||
Sbjct 459963 CGGTC-TCACGACCCTTACCT---TCTCTCTCATATCGCTCGTAGAGCTCCTTGAACTCA 460018
Query 221963 TCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCCA-GTGCTT 222021
|||||||| | || || ||| || ||| ||| |||||||| |||| ||||
Sbjct 460019 TCACCGTAGACGTCAGACAAGCCAGGGCACTCATTGGGGCACATCAGGGTCCAAGTGCC- 460077
Query 222022 GTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCT 222081
||| | | ||| | || ||||||||| || |||||||| || || | |||||||| |
Sbjct 460078 GTTCTGCTCGACGCGCTCCATGAAGAGATCTGGGATCCAAAGGGCGTAGAAGAGATCGCG 460137
Query 222082 GGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGC 222141
| || |||||| ||||| ||| || | || |||| |||| ||| | || ||
Sbjct 460138 AGCACGGACTTCCTCCTTGCCGTGGTTCTTACGGAGGTCCATGAACTGAAAGACATCGGC 460197
Query 222142 GTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCAC 222201
|||||| ||||| || |||| ||| | || || || ||||||||||||||||| || |
Sbjct 460198 GTGCCATGGCTCAAGGTAGATGGCAAAGGCACCTGGGCGCTTGTTGCCACCCTGGTCGA- 460256
Query 222202 CATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGACCGT 222260
| | ||| | |||| | | | | ||||||| || ||||||||| ||||
Sbjct 460257 CGTAGCGAGCAGTGTTGTTGTACACTCTCAACATCGGTACAAGACCGTTGGATGTGCCGT 460316
Query 222261 TGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAGACATG----CCGATA 222316
||||||| || || | ||| || | || || || | ||||| || |||
Sbjct 460317 TGGTGCCACCGATATAGGAACCAGTAGCAC---GGATATTGTGA-ACATGCAGACCAATA 460372
Query 222317 CCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCATA 222376
|| || |||| || |||||||| || || ||||||| ||||| |||||| || ||
Sbjct 460373 CCGCCAGCGTTCTTGGAGATCATAGCACATGTCTTGAGGGTGTCGTAGATGCCGTCGATG 460432
Query 222377 GAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATT-TGGTGGAACAGGC 222435
||| ||||| | | | || || || || | || ||| | || |||| || ||
Sbjct 460433 CTGTCATCCTTCATGGCAATCAAGAAGCAGGAAGCCAACTGGGCTTGCGGTGTTCCA-GC 460491
Query 222436 GTTAAACAGCGTGGGACTGGCGTGTGTAAAGTA 222468
| | || ||||| || || ||||| |||||
Sbjct 460492 GCTGAAAAGCGTTGGCGACGCATGTGTGAAGTA 460524
>seq31
Length=267444
Score = 161 bits (178), Expect = 2e-34
Identities = 556/861 (65%), Gaps = 30/861 (3%)
Strand=Plus/Plus
Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536
|| ||| |||||||||||||||| | || ||||||||| || ||||||||||||
Sbjct 238150 ATCTGGCAGATGTACAAGAAGGCCGAGGCATCGTTCTGGACCGCAGAGGAGATTGATCTG 238209
Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGC-ATT-TTC-TCAAG 25593
||||||| || ||| ||| || | | ||| || || ||| ||| ||| ||
Sbjct 238210 TCCAAGGATCTGCACGATTGGAACAAGCGACTCAATGATGACGAGCGATTCTTCATCTCA 238269
Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653
|||| | || ||||| ||||| || || || || || |||||||| || |||| |
Sbjct 238270 CACGTTCTCGCTTTCTTCGCAGCATCAGACGGCATTGTCAACGAGAACCTTGTCGAGCGC 238329
Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713
|||| | || || ||| | ||||| || ||||| ||||||||||| ||
Sbjct 238330 TTCAGCTCTGAGGTTCAGATCCCAGAGGCACGATGCTTCTATGGTTTCCAGATCATGATG 238389
Query 25714 GAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATGACGTACATTACAGACGTCGCC 25773
|| || | ||||| || || || ||| | |||| | || ||| || |
Sbjct 238390 GAGAACATCCACTCCGAAACATACTCCCTCCTTAT--TGACACATATATCAG-CGAGCCA 238446
Query 25774 GAG-AGAGATC--GGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCG 25830
|| || || | ||||| |||||||| |||| || ||||| | ||||||
Sbjct 238447 AAGCAGCGAACATATCTGTTCAACGCCATCGATAACATCCCGTGCATCCGTAAGAAGGCT 238506
Query 25831 CGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCC 25890
||||| || |||||| | | | | || || | | || |||| ||
Sbjct 238507 GACTGGGCGTTGCGATGGATCTCGGACAAAAATTCCACATTCGCCCTCCGATTGGTTGCT 238566
Query 25891 TTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAG 25950
|| || ||||| ||||| ||||| || |||||| || || |||||||||||||| |||
Sbjct 238567 TTCGCCGCTGTTGAGGGTATCTTCTTTTCCGGTTCCTTCGCCGCCATCTTCTGGCTGAAG 238626
Query 25951 CAGAAGGGGACCATGCCCGGGCTGTAC-TTTTCCAACGAGCTCATCAGCAGGGACGAGGG 26009
|| || |||| | || || ||| || || |||||||| ||| | | || |||||
Sbjct 238627 AAGCGTGGTCTCATGGCTGGCCT-TACATTCTCGAACGAGCTTATCTCCCGTGATGAGGG 238685
Query 26010 TCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCTCA 26069
| | |||| ||| || ||||| || || | | || |||||| |||| || |||
Sbjct 238686 TATGCACACAGACTTCGCCTGTCTCCTGTTCTCG---CACTTGAAGAACAAGCCAGATCA 238742
Query 26070 AGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNNNNNN 26129
| || | || |||||| ||||| || | || ||| ||||||| |
Sbjct 238743 GGCACTTGTGCAGAGCATCATCGTTGAGGCAGTTGCTATTGAGCAGGAGTTCCTCACAGA 238802
Query 26130 NNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATTGAGTA 26189
| ||||||||| | |||||| |||||||| ||||
Sbjct 238803 TGCTCTGCCATGCAAGCTTCTCGGCATGAACGCTGGTCTCATGTCACAATACATCGAGTT 238862
Query 26190 TGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCG----CCAGA--CTCTACAGTACGC- 26242
|||||||||| ||||| | ||| ||||| | ||| |||||| ||||
Sbjct 238863 CGTGGCCGACCGCCTGCTTT------TGGCACTCGGCAACAAGAAGTTCTACA--ACGCC 238914
Query 26243 -CTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAA 26301
| ||||| |||||||| ||||| ||||| || ||| || |||||||||||||| ||
Sbjct 238915 ACCAACCCATTCGACTTCATGGAGAACATCTCACTGGGCGGCAAGACCAACTTCTTCGAG 238974
Query 26302 AAGAGGGTCGGCGACTATCAA 26322
||| | || ||||| || |||
Sbjct 238975 AAGCGTGTTGGCGAGTACCAA 238995
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928839099215040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |