Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09- 23] 491 sequences; 33,245,410 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq8 178 2e-39 seq31 161 2e-34 >seq8 Length=557162 Score = 178 bits (196), Expect = 2e-39 Identities = 722/1113 (65%), Gaps = 45/1113 (4%) Strand=Plus/Plus Query 221371 GTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAAGACTGCGTCAGG-GCAGCGT 221429 ||| | |||||| ||||| | ||||| | |||| || || ||| | || || | Sbjct 459442 GTAAGTCTCGTATGGACCAAGCTTCTCGGCAAGCTCGCACGAA-GCCTCAAGAGCGGCAT 459500 Query 221430 GGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAAGTGAAGGGCA 221489 ||||||||||||| ||||| ||||||| |||||||||||| || ||| |||| Sbjct 459501 GGTAGATGGTCTCGAAGATATGGATGTTGAGCTCCTTGGCCTCGGGCGAGTCGAATGGCA 459560 Query 221490 TACGCAGCATCT-GAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGGCCTGTGT 221548 |||| || | ||||| | || || || || | || || | ||| || || | ||| Sbjct 459561 TACGGAGGGCCAAGAAAG-CATCAGCAAGACCGTTGACACCCAGACCAATAGGTCGGTGA 459619 Query 221549 CTCCTGTTGGAAGCGGCCG--CTTCTGGCACGGGATAAAAGTTGACGTCGATCAGATTGT 221606 | |||| | ||| | ||||| || || ||| |||||| ||||| |||| Sbjct 459620 CGGAAGTTGCT--CTTCCGTGCCTCTGGTACTGGGTAATAGTTGATCTCGATGGTCTTGT 459677 Query 221607 TGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAACACCAACT 221666 | | ||| |||||| || || |||||| ||||||| | | ||| ||| Sbjct 459678 TCAAGTTGCGAGTGACAACCTTGGTGACCTCGTGAAGCTTCTTGAAGTCGAAAACCT--- 459734 Query 221667 CGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCAGGTTACACA 221726 ||| | || | || || | | || |||| ||||| ||| || | Sbjct 459735 ------CGTTTTCGATG---TCAACGTATGTCGGCAGAGCAAGCGAGGCCAAGTTGCAGA 459785 Query 221727 CGGCCACCTCGTCCTTGTTG--GTATACTGTATGATCTCTGTACAGAGGTTGCTGCACTT 221784 | || ||||| || || || | |||| ||||| || || || | ||| | || Sbjct 459786 CAGCGACCTCATC--TGGTGCAGAGTACTCCATGATTTCAGTGCACAAGTTCGAACTTTT 459843 Query 221785 GATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAA 221844 |||||| || |||| || || || |||||| ||||| || |||||||| || || || Sbjct 459844 GATGGTGCCAAGGTTCTTCTGGTTGCTCTTGCGGTTGGCGGCATCCTTGTACAGGATGAA 459903 Query 221845 GGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTGG-CGCTCA 221903 || ||||||||| ||| || | ||||| | ||||| | ||||| ||| | Sbjct 459904 AGGTGTGCCAGTCTCGGTCTGGGCTTCAAGAATTGCATACCAGATCT-TCTGGGCGCGAA 459962 Query 221904 CCGTCCTCTTGACTGCACCCTCGGTCTTT-TCATACCCGGTATAGAGCATGTCAAACTTT 221962 | ||| || ||| ||| ||| | ||||| | |||||| | |||| Sbjct 459963 CGGTC-TCACGACCCTTACCT---TCTCTCTCATATCGCTCGTAGAGCTCCTTGAACTCA 460018 Query 221963 TCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCCA-GTGCTT 222021 |||||||| | || || ||| || ||| ||| |||||||| |||| |||| Sbjct 460019 TCACCGTAGACGTCAGACAAGCCAGGGCACTCATTGGGGCACATCAGGGTCCAAGTGCC- 460077 Query 222022 GTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCT 222081 ||| | | ||| | || ||||||||| || |||||||| || || | |||||||| | Sbjct 460078 GTTCTGCTCGACGCGCTCCATGAAGAGATCTGGGATCCAAAGGGCGTAGAAGAGATCGCG 460137 Query 222082 GGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGC 222141 | || |||||| ||||| ||| || | || |||| |||| ||| | || || Sbjct 460138 AGCACGGACTTCCTCCTTGCCGTGGTTCTTACGGAGGTCCATGAACTGAAAGACATCGGC 460197 Query 222142 GTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCAC 222201 |||||| ||||| || |||| ||| | || || || ||||||||||||||||| || | Sbjct 460198 GTGCCATGGCTCAAGGTAGATGGCAAAGGCACCTGGGCGCTTGTTGCCACCCTGGTCGA- 460256 Query 222202 CATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGACCGT 222260 | | ||| | |||| | | | | ||||||| || ||||||||| |||| Sbjct 460257 CGTAGCGAGCAGTGTTGTTGTACACTCTCAACATCGGTACAAGACCGTTGGATGTGCCGT 460316 Query 222261 TGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAGACATG----CCGATA 222316 ||||||| || || | ||| || | || || || | ||||| || ||| Sbjct 460317 TGGTGCCACCGATATAGGAACCAGTAGCAC---GGATATTGTGA-ACATGCAGACCAATA 460372 Query 222317 CCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCATA 222376 || || |||| || |||||||| || || ||||||| ||||| |||||| || || Sbjct 460373 CCGCCAGCGTTCTTGGAGATCATAGCACATGTCTTGAGGGTGTCGTAGATGCCGTCGATG 460432 Query 222377 GAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATT-TGGTGGAACAGGC 222435 ||| ||||| | | | || || || || | || ||| | || |||| || || Sbjct 460433 CTGTCATCCTTCATGGCAATCAAGAAGCAGGAAGCCAACTGGGCTTGCGGTGTTCCA-GC 460491 Query 222436 GTTAAACAGCGTGGGACTGGCGTGTGTAAAGTA 222468 | | || ||||| || || ||||| ||||| Sbjct 460492 GCTGAAAAGCGTTGGCGACGCATGTGTGAAGTA 460524 >seq31 Length=267444 Score = 161 bits (178), Expect = 2e-34 Identities = 556/861 (65%), Gaps = 30/861 (3%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| |||||||||||||||| | || ||||||||| || |||||||||||| Sbjct 238150 ATCTGGCAGATGTACAAGAAGGCCGAGGCATCGTTCTGGACCGCAGAGGAGATTGATCTG 238209 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGC-ATT-TTC-TCAAG 25593 ||||||| || ||| ||| || | | ||| || || ||| ||| ||| || Sbjct 238210 TCCAAGGATCTGCACGATTGGAACAAGCGACTCAATGATGACGAGCGATTCTTCATCTCA 238269 Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653 |||| | || ||||| ||||| || || || || || |||||||| || |||| | Sbjct 238270 CACGTTCTCGCTTTCTTCGCAGCATCAGACGGCATTGTCAACGAGAACCTTGTCGAGCGC 238329 Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713 |||| | || || ||| | ||||| || ||||| ||||||||||| || Sbjct 238330 TTCAGCTCTGAGGTTCAGATCCCAGAGGCACGATGCTTCTATGGTTTCCAGATCATGATG 238389 Query 25714 GAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATGACGTACATTACAGACGTCGCC 25773 || || | ||||| || || || ||| | |||| | || ||| || | Sbjct 238390 GAGAACATCCACTCCGAAACATACTCCCTCCTTAT--TGACACATATATCAG-CGAGCCA 238446 Query 25774 GAG-AGAGATC--GGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCG 25830 || || || | ||||| |||||||| |||| || ||||| | |||||| Sbjct 238447 AAGCAGCGAACATATCTGTTCAACGCCATCGATAACATCCCGTGCATCCGTAAGAAGGCT 238506 Query 25831 CGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCC 25890 ||||| || |||||| | | | | || || | | || |||| || Sbjct 238507 GACTGGGCGTTGCGATGGATCTCGGACAAAAATTCCACATTCGCCCTCCGATTGGTTGCT 238566 Query 25891 TTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAG 25950 || || ||||| ||||| ||||| || |||||| || || |||||||||||||| ||| Sbjct 238567 TTCGCCGCTGTTGAGGGTATCTTCTTTTCCGGTTCCTTCGCCGCCATCTTCTGGCTGAAG 238626 Query 25951 CAGAAGGGGACCATGCCCGGGCTGTAC-TTTTCCAACGAGCTCATCAGCAGGGACGAGGG 26009 || || |||| | || || ||| || || |||||||| ||| | | || ||||| Sbjct 238627 AAGCGTGGTCTCATGGCTGGCCT-TACATTCTCGAACGAGCTTATCTCCCGTGATGAGGG 238685 Query 26010 TCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCTCA 26069 | | |||| ||| || ||||| || || | | || |||||| |||| || ||| Sbjct 238686 TATGCACACAGACTTCGCCTGTCTCCTGTTCTCG---CACTTGAAGAACAAGCCAGATCA 238742 Query 26070 AGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNNNNNN 26129 | || | || |||||| ||||| || | || ||| ||||||| | Sbjct 238743 GGCACTTGTGCAGAGCATCATCGTTGAGGCAGTTGCTATTGAGCAGGAGTTCCTCACAGA 238802 Query 26130 NNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATTGAGTA 26189 | ||||||||| | |||||| |||||||| |||| Sbjct 238803 TGCTCTGCCATGCAAGCTTCTCGGCATGAACGCTGGTCTCATGTCACAATACATCGAGTT 238862 Query 26190 TGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCG----CCAGA--CTCTACAGTACGC- 26242 |||||||||| ||||| | ||| ||||| | ||| |||||| |||| Sbjct 238863 CGTGGCCGACCGCCTGCTTT------TGGCACTCGGCAACAAGAAGTTCTACA--ACGCC 238914 Query 26243 -CTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAA 26301 | ||||| |||||||| ||||| ||||| || ||| || |||||||||||||| || Sbjct 238915 ACCAACCCATTCGACTTCATGGAGAACATCTCACTGGGCGGCAAGACCAACTTCTTCGAG 238974 Query 26302 AAGAGGGTCGGCGACTATCAA 26322 ||| | || ||||| || ||| Sbjct 238975 AAGCGTGTTGGCGAGTACCAA 238995 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928839099215040