Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09- 23] 491 sequences; 33,245,410 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq8 201 1e-46 seq31 116 4e-21 >seq8 Length=557162 Score = 201 bits (222), Expect = 1e-46 Identities = 896/1396 (64%), Gaps = 35/1396 (3%) Strand=Plus/Minus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 || ||| | ||| ||||||| || || |||| |||||||| ||||| ||||| ||| Sbjct 460614 CCGCAGCAGATGATCATGCGTGTGGCGGTCGGTATCCACGGAGAAGATATTGAGGCTGCG 460555 Query 75272 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 | ||||||||| || | ||||| | | ||| |||| || || | ||||| || || Sbjct 460554 ATTGAGACATACAACTACATGTCGCTGAAGTAC-TTCACACATGCGTCGCCAACGCTTTT 460496 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 || ||||| ||||| | | ||| || | |||||| | || |||| ||||| || Sbjct 460495 CAGCGCTGGAACACCGCAAGCCCAGTTGGCTTCCTGCTTCTTGATTGCCATGAAGGATGA 460436 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 | ||| |||| ||||| | || || | | ||||| ||||| ||| ||||| Sbjct 460435 CAGCATCGACGGCATCTACGACACCCTCAAGACATGTGCTATGATCTCCAAGAACGCTGG 460376 Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 75510 |||||||| |||| | || || | | || | | || ||| | || || || Sbjct 460375 CGGTATTGGTCTGCATGTTCACAATATCCGTGCTACTGGTTCCTATATCGGTGGCACCAA 460316 Query 75511 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 75570 || ||| | ||| || | || ||| | | || | ||| ||| || ||||| || Sbjct 460315 CGGCACATCCAACGGTCTTGTACCGATGTTGAGAGTGTACAACAACACTGCTCGCTACGT 460256 Query 75571 AAATCAAGCGGGGCGTC----GCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGCATG 75626 | || | | ||| | || || || | || ||||| | || |||||||| | Sbjct 460255 CGACCAGG-GTGGCAACAAGCGCCCAGGTGCCTTTGCCATCTACCTTGAGCCATGGCACG 460197 Query 75627 CCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTG-T 75685 ||||| || | ||||| | || | || ||||| || | || || | || ||| | Sbjct 460196 CCGATGTCTTTCAGTTCATGGACCTCCGTAAGAACCACGGCAAGGAGGAAG-TCCGTGCT 460138 Query 75686 AGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGT 75745 | |||||||| | |||| ||||| ||||| || |||||| |||| || ||| || Sbjct 460137 CGCGATCTCTTCTACGCCCTTTGGATCCCAGATCTCTTCATGGAGCGCGTCGAGCAGAAC 460078 Query 75746 GGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAG 75805 || ||| | || | || || | || || || | || |||| ||||| Sbjct 460077 GGCACTTGGACCCTGATGTGCCCCAATGAGTGCCCTGGCTTGTCTGACGTCTACGGTGAT 460018 Query 75806 GAGTTTGAAGCCCTCTACACAAAGTATGA-AGAGGAGGGTAGAGCCAATGCGACTGTACC 75864 ||||| | | |||||| ||||| |||| ||| || | | || ||| || | Sbjct 460017 GAGTTCAAGGAGCTCTACGAGCGATATGAGAGAGAAGGTAAGGGTCG-TGAGACCGTTCG 459959 Query 75865 AGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATA 75923 ||| | || | | ||| | || ||||| || | ||||| |||||||| ||||| | | Sbjct 459958 CGCC-CAGAAGATCTGGTATGCAATTCTTGAAGCCCAGACCGAGACTGGCACACCTTTCA 459900 Query 75924 TGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGA 75983 | || ||||||||||| ||| ||||| ||||| ||||| | || || ||||| | Sbjct 459899 TCCTGTACAAGGATGCCGCCAACCGCAAGAGCAACCAGAAGAACCTTGGCACCATCAAAA 459840 Query 75984 GCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCA 76043 | || || | ||||| ||||| | |||||| | | |||||| ||||| |||| Sbjct 459839 GTTCGAACTTGTGCACTGAAATCATGGAGTACTCTGCACCAGATGAGGTCGCTGTCTGCA 459780 Query 76044 ATTTGGCATCAATCGCCCTTCCAAAGTA---TGTCAATGAAGAGACTCGCACTTTT-GAT 76099 | ||||| || | || || || | || || || ||| | || |||| || Sbjct 459779 ACTTGGCCTCGCTTGCTCTGCCGACATACGTTGACATCGAAAA----CGAGGTTTTCGAC 459724 Query 76100 TATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGAC 76159 | | || ||||| || |||| ||| |||| || || | ||| ||| || Sbjct 459723 TTCAAGAAGCTTCACGAGGTCACCAAGGTTGTCACTCGCAACTTGAACAAGACCATCGAG 459664 Query 76160 AGAAATTTTTATCCCGT-TGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGG 76218 | || | ||| || || ||| || || ||| || | || ||| |||||||||| Sbjct 459663 ATCAACTATTACCCAGTACCAGA-GGCACGGAAGAGCAACTTCCGTCACCGACCTATTGG 459605 Query 76219 TTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGC--TACG-CATTTGATTC 76275 | ||||||| | ||||| || |||| | | ||| || | || | |||| || || Sbjct 459604 TCTGGGTGTCAACGGTCTTGCTGATG---CTTTCTTGGCCCTCCGTATGCCATTCGACTC 459548 Query 76276 AGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGA 76335 || ||||||||| | || | |||||| || ||||| || || || | || || Sbjct 459547 GCCCGAGGCCAAGGAGCTCAACATCCATATCTTCGAGACCATCTACCATGCCGCTCTTGA 459488 Query 76336 GGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGC 76395 ||| || || | || || | ||| | || ||||| | |||| ||||| | Sbjct 459487 GGCTTCGTGCGAGCTTGCCGAGAAGCTTGGTCCATACGAGACTTACCAGGGCTCTCCAGT 459428 Query 76396 GTCCCAAGGGGTGCTTCAGTTTGATATGTGGG--AAG-GTGAAACCAAGCTCAACTACGA 76452 || ||||| | |||||||| || ||||||| ||| | || | || | || Sbjct 459427 ATCGCAAGGCGAGCTTCAGTACGACATGTGGGGCAAGACTCCTACAGACCT---GTGGGA 459371 Query 76453 CTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGC 76512 ||||| | ||||||| ||| || | ||| | || ||| || | | || Sbjct 459370 CTGGGCCGAGCTCAAGGCCAAGATCGCTCAGCATGGTGTGCGCAACTCGCTGCTTGTTGC 459311 Query 76513 ACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATA 76572 ||| ||||| || || || ||| |||| ||| |||| ||||| ||||| || ||||| Sbjct 459310 ACCTATGCCTACCGCATCGACCTCACAGATCATGGGCTTCAATGAGTGCTTCGAGCCATA 459251 Query 76573 CACAACAAACATCTAC 76588 ||| | ||||||||| Sbjct 459250 CACGAGCAACATCTAC 459235 >seq31 Length=267444 Score = 116 bits (128), Expect = 4e-21 Identities = 289/436 (66%), Gaps = 12/436 (3%) Strand=Plus/Plus Query 65087 TTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTATTGGT 65146 |||| || || ||| |||||||||||||| ||||| || ||| ||| || | ||| Sbjct 238562 TTGCTTTCGCCGCTGTTGAGGGTATCTTCTTTTCCGGTTCCTTCGCCGCCATCTTCTGGC 238621 Query 65147 TGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGATG 65206 |||||||||| ||||||||| | ||||| ||||| || || ||||| ||||| |||| Sbjct 238622 TGAAGAAGCGTGGTCTCATGGCTGGCCTTACATTCTCGAACGAGCTTATCTCCCGTGATG 238681 Query 65207 AGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACTTTGCGTAATAGACCCACTA 65266 ||||| | ||| || || ||| || ||| | ||| || | | ||| Sbjct 238682 AGGGTATGCACACAGACTTCGCCTGTCTCCTGTTCTCGCACTTGAAGAACA-AGCCAGAT 238740 Query 65267 CCGAAAC-TATCCACGCCATCGTGAAAGAGGCGGTTGAGATTGAGAAAGGGTTCATCTTG 65325 | | || | | || |||| | ||||| |||| |||||| | | |||| || Sbjct 238741 CAGGCACTTGTGCAGAGCATCATCGTTGAGGCAGTTGCTATTGAGCAGGAGTTCCTCACA 238800 Query 65326 GACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAGATGTCCGAGTACATTGAG 65385 || || || ||||| || || |||| |||||| ||| ||||| | ||||| ||| Sbjct 238801 GATGCTCTGCCATGCAAGCTTCTCGGCATGAACGCTGGTCTCATGTCACAATACATCGAG 238860 Query 65386 TATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGTGCCACCCA-----TTTGGAACGCGA 65440 | ||| | || || || || | | || || | | | | ||||| | Sbjct 238861 TTCGTGGCCGACCGCCTGCTTTTGGCACTCGG-----CAACAAGAAGTTCTACAACGCCA 238915 Query 65441 AGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCAACTTCTTTGAGA 65500 || ||||| ||||| ||||| ||||| || | || |||||||||||||| |||| Sbjct 238916 CCAACCCATTCGACTTCATGGAGAACATCTCACTGGGCGGCAAGACCAACTTCTTCGAGA 238975 Query 65501 AGCGAGTTGGGGACTA 65516 |||| ||||| || || Sbjct 238976 AGCGTGTTGGCGAGTA 238991 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596565938554080