Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09-
23] 491 sequences; 33,245,410 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq8 201 1e-46
seq31 116 4e-21
>seq8
Length=557162
Score = 201 bits (222), Expect = 1e-46
Identities = 896/1396 (64%), Gaps = 35/1396 (3%)
Strand=Plus/Minus
Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271
|| ||| | ||| ||||||| || || |||| |||||||| ||||| ||||| |||
Sbjct 460614 CCGCAGCAGATGATCATGCGTGTGGCGGTCGGTATCCACGGAGAAGATATTGAGGCTGCG 460555
Query 75272 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 75330
| ||||||||| || | ||||| | | ||| |||| || || | ||||| || ||
Sbjct 460554 ATTGAGACATACAACTACATGTCGCTGAAGTAC-TTCACACATGCGTCGCCAACGCTTTT 460496
Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390
|| ||||| ||||| | | ||| || | |||||| | || |||| ||||| ||
Sbjct 460495 CAGCGCTGGAACACCGCAAGCCCAGTTGGCTTCCTGCTTCTTGATTGCCATGAAGGATGA 460436
Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450
| ||| |||| ||||| | || || | | ||||| ||||| ||| |||||
Sbjct 460435 CAGCATCGACGGCATCTACGACACCCTCAAGACATGTGCTATGATCTCCAAGAACGCTGG 460376
Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 75510
|||||||| |||| | || || | | || | | || ||| | || || ||
Sbjct 460375 CGGTATTGGTCTGCATGTTCACAATATCCGTGCTACTGGTTCCTATATCGGTGGCACCAA 460316
Query 75511 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 75570
|| ||| | ||| || | || ||| | | || | ||| ||| || ||||| ||
Sbjct 460315 CGGCACATCCAACGGTCTTGTACCGATGTTGAGAGTGTACAACAACACTGCTCGCTACGT 460256
Query 75571 AAATCAAGCGGGGCGTC----GCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGCATG 75626
| || | | ||| | || || || | || ||||| | || |||||||| |
Sbjct 460255 CGACCAGG-GTGGCAACAAGCGCCCAGGTGCCTTTGCCATCTACCTTGAGCCATGGCACG 460197
Query 75627 CCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTG-T 75685
||||| || | ||||| | || | || ||||| || | || || | || ||| |
Sbjct 460196 CCGATGTCTTTCAGTTCATGGACCTCCGTAAGAACCACGGCAAGGAGGAAG-TCCGTGCT 460138
Query 75686 AGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGT 75745
| |||||||| | |||| ||||| ||||| || |||||| |||| || ||| ||
Sbjct 460137 CGCGATCTCTTCTACGCCCTTTGGATCCCAGATCTCTTCATGGAGCGCGTCGAGCAGAAC 460078
Query 75746 GGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAG 75805
|| ||| | || | || || | || || || | || |||| |||||
Sbjct 460077 GGCACTTGGACCCTGATGTGCCCCAATGAGTGCCCTGGCTTGTCTGACGTCTACGGTGAT 460018
Query 75806 GAGTTTGAAGCCCTCTACACAAAGTATGA-AGAGGAGGGTAGAGCCAATGCGACTGTACC 75864
||||| | | |||||| ||||| |||| ||| || | | || ||| || |
Sbjct 460017 GAGTTCAAGGAGCTCTACGAGCGATATGAGAGAGAAGGTAAGGGTCG-TGAGACCGTTCG 459959
Query 75865 AGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATA 75923
||| | || | | ||| | || ||||| || | ||||| |||||||| ||||| | |
Sbjct 459958 CGCC-CAGAAGATCTGGTATGCAATTCTTGAAGCCCAGACCGAGACTGGCACACCTTTCA 459900
Query 75924 TGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGA 75983
| || ||||||||||| ||| ||||| ||||| ||||| | || || ||||| |
Sbjct 459899 TCCTGTACAAGGATGCCGCCAACCGCAAGAGCAACCAGAAGAACCTTGGCACCATCAAAA 459840
Query 75984 GCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCA 76043
| || || | ||||| ||||| | |||||| | | |||||| ||||| ||||
Sbjct 459839 GTTCGAACTTGTGCACTGAAATCATGGAGTACTCTGCACCAGATGAGGTCGCTGTCTGCA 459780
Query 76044 ATTTGGCATCAATCGCCCTTCCAAAGTA---TGTCAATGAAGAGACTCGCACTTTT-GAT 76099
| ||||| || | || || || | || || || ||| | || |||| ||
Sbjct 459779 ACTTGGCCTCGCTTGCTCTGCCGACATACGTTGACATCGAAAA----CGAGGTTTTCGAC 459724
Query 76100 TATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGAC 76159
| | || ||||| || |||| ||| |||| || || | ||| ||| ||
Sbjct 459723 TTCAAGAAGCTTCACGAGGTCACCAAGGTTGTCACTCGCAACTTGAACAAGACCATCGAG 459664
Query 76160 AGAAATTTTTATCCCGT-TGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGG 76218
| || | ||| || || ||| || || ||| || | || ||| ||||||||||
Sbjct 459663 ATCAACTATTACCCAGTACCAGA-GGCACGGAAGAGCAACTTCCGTCACCGACCTATTGG 459605
Query 76219 TTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGC--TACG-CATTTGATTC 76275
| ||||||| | ||||| || |||| | | ||| || | || | |||| || ||
Sbjct 459604 TCTGGGTGTCAACGGTCTTGCTGATG---CTTTCTTGGCCCTCCGTATGCCATTCGACTC 459548
Query 76276 AGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGA 76335
|| ||||||||| | || | |||||| || ||||| || || || | || ||
Sbjct 459547 GCCCGAGGCCAAGGAGCTCAACATCCATATCTTCGAGACCATCTACCATGCCGCTCTTGA 459488
Query 76336 GGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGC 76395
||| || || | || || | ||| | || ||||| | |||| ||||| |
Sbjct 459487 GGCTTCGTGCGAGCTTGCCGAGAAGCTTGGTCCATACGAGACTTACCAGGGCTCTCCAGT 459428
Query 76396 GTCCCAAGGGGTGCTTCAGTTTGATATGTGGG--AAG-GTGAAACCAAGCTCAACTACGA 76452
|| ||||| | |||||||| || ||||||| ||| | || | || | ||
Sbjct 459427 ATCGCAAGGCGAGCTTCAGTACGACATGTGGGGCAAGACTCCTACAGACCT---GTGGGA 459371
Query 76453 CTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGC 76512
||||| | ||||||| ||| || | ||| | || ||| || | | ||
Sbjct 459370 CTGGGCCGAGCTCAAGGCCAAGATCGCTCAGCATGGTGTGCGCAACTCGCTGCTTGTTGC 459311
Query 76513 ACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATA 76572
||| ||||| || || || ||| |||| ||| |||| ||||| ||||| || |||||
Sbjct 459310 ACCTATGCCTACCGCATCGACCTCACAGATCATGGGCTTCAATGAGTGCTTCGAGCCATA 459251
Query 76573 CACAACAAACATCTAC 76588
||| | |||||||||
Sbjct 459250 CACGAGCAACATCTAC 459235
>seq31
Length=267444
Score = 116 bits (128), Expect = 4e-21
Identities = 289/436 (66%), Gaps = 12/436 (3%)
Strand=Plus/Plus
Query 65087 TTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTATTGGT 65146
|||| || || ||| |||||||||||||| ||||| || ||| ||| || | |||
Sbjct 238562 TTGCTTTCGCCGCTGTTGAGGGTATCTTCTTTTCCGGTTCCTTCGCCGCCATCTTCTGGC 238621
Query 65147 TGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGATG 65206
|||||||||| ||||||||| | ||||| ||||| || || ||||| ||||| ||||
Sbjct 238622 TGAAGAAGCGTGGTCTCATGGCTGGCCTTACATTCTCGAACGAGCTTATCTCCCGTGATG 238681
Query 65207 AGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACTTTGCGTAATAGACCCACTA 65266
||||| | ||| || || ||| || ||| | ||| || | | |||
Sbjct 238682 AGGGTATGCACACAGACTTCGCCTGTCTCCTGTTCTCGCACTTGAAGAACA-AGCCAGAT 238740
Query 65267 CCGAAAC-TATCCACGCCATCGTGAAAGAGGCGGTTGAGATTGAGAAAGGGTTCATCTTG 65325
| | || | | || |||| | ||||| |||| |||||| | | |||| ||
Sbjct 238741 CAGGCACTTGTGCAGAGCATCATCGTTGAGGCAGTTGCTATTGAGCAGGAGTTCCTCACA 238800
Query 65326 GACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAGATGTCCGAGTACATTGAG 65385
|| || || ||||| || || |||| |||||| ||| ||||| | ||||| |||
Sbjct 238801 GATGCTCTGCCATGCAAGCTTCTCGGCATGAACGCTGGTCTCATGTCACAATACATCGAG 238860
Query 65386 TATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGTGCCACCCA-----TTTGGAACGCGA 65440
| ||| | || || || || | | || || | | | | ||||| |
Sbjct 238861 TTCGTGGCCGACCGCCTGCTTTTGGCACTCGG-----CAACAAGAAGTTCTACAACGCCA 238915
Query 65441 AGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCAACTTCTTTGAGA 65500
|| ||||| ||||| ||||| ||||| || | || |||||||||||||| ||||
Sbjct 238916 CCAACCCATTCGACTTCATGGAGAACATCTCACTGGGCGGCAAGACCAACTTCTTCGAGA 238975
Query 65501 AGCGAGTTGGGGACTA 65516
|||| ||||| || ||
Sbjct 238976 AGCGTGTTGGCGAGTA 238991
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596565938554080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |