Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09- 23] 491 sequences; 33,245,410 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq8 161 3e-34 seq159 102 2e-16 seq50 100 8e-16 seq13 84.2 6e-11 >seq8 Length=557162 Score = 161 bits (178), Expect = 3e-34 Identities = 561/868 (65%), Gaps = 13/868 (1%) Strand=Plus/Plus Query 155640 ATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTG 155699 || ||| ||||| ||| ||||| ||||||||||| | ||||||||||| || | | Sbjct 459818 ATTTCAGTGCACAAGTTCGAACTTTTGATGGTGCCAAGGTTCTTCTGGTTGCTCTTGCGG 459877 Query 155700 TTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATC 155759 || ||||||||||| || ||| | || || || ||||| |||| || || ||||| Sbjct 459878 TTGGCGGCATCCTTGTACAGGATGAAAGGTGTGCCAGTCTCGGTCTGGGCTTCAAGAATT 459937 Query 155760 TTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATTTC 155819 ||||| | |||| || || | ||||| ||||||| | Sbjct 459938 GCATACCAGATCTTCTGGGCGCGAACGGTCTCACGACCCTTACCTTCTCTCTCATATCGC 459997 Query 155820 ATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGG 155879 || ||| | | || |||||||| ||| || |||||||||| || |||| Sbjct 459998 TCGTAGAGCTCCTTGAACTCATCACCGTAGACGTCAGACAAGCCAGGGCACTCATTGGGG 460057 Query 155880 CAAAACAGCGACCAAATTTTATTACCGATT-ACACGCTCCATAAATACATCACTCGCCCA 155938 || | ||| | |||| | || | | | || |||||||| || | ||| ||| Sbjct 460058 CACATCAGGGTCCAAGTGCCGTT-CTGCTCGACGCGCTCCATGAAGAGATCTGGGATCCA 460116 Query 155939 AATAGCATAGAAAAGGTCCCTTGCCTTTGACT-CCTCATCGCCGTGATTCTTCCGTAGCT 155997 || || ||||| || || | || |||| |||| | |||||| ||||| || || | Sbjct 460117 AAGGGCGTAGAAGAGATCGCGAGCACG-GACTTCCTCCTTGCCGTGGTTCTTACGGAGGT 460175 Query 155998 CTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCC 156057 | | ||| | | ||| | || |||||| || || || ||||| ||| | Sbjct 460176 CCATGAACTGAAAGACATCGGCGTGCCATGGCTCAAGGTAGATGGCAAAGGCACCTGGGC 460235 Query 156058 TCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAA 156114 |||| |||||||| || || || |||||||| || ||| | || | | ||| || | Sbjct 460236 GCTTGTTGCCACCCTGGTCGACGTAGCGAGCAGTGTTGTTGTACACTCTCAACATCGGTA 460295 Query 156115 TAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTAT 156174 || ||| ||||| ||||| ||||| || | |||| ||||||| | || | ||| | Sbjct 460296 CAAGACCGTTGGATGTGCCGTTGGTGCCACCGATATAGGAACCAGTAGCACGGATATTGT 460355 Query 156175 GAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTAT 156234 ||| ||| || |||||||| || | || || || ||| ||| ||| | || | Sbjct 460356 GAACATGCAGACCAATACCGCCAGCGTTCTTGGAGATCATAGCACATGTCTTGAGGGTGT 460415 Query 156235 TGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAG 156294 | | || || || || ||||| | ||| | | | |||| ||| || || | Sbjct 460416 CGTAGATGCCGTCGATGCTGTCATCCTTCATGGCAATCAAGAAGCAGGAAGCCAACTGGG 460475 Query 156295 GTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACA 156354 | | |||||||||||| |||| || || || | ||||| | || ||||| |||| Sbjct 460476 CTTGCGGTGTTCCAGCGCTGAAAAGCGTTGGCGACGCATGTGTGAAGTACTTCAGCGACA 460535 Query 156355 TATAATCGTATGTCTCCTTAATC---TTCTCAAGATTAGACCCGTGAATACAGATAGAGA 156411 | || | ||||||||| |||| ||||| || ||||| |||| || | | Sbjct 460536 TGTAGTTGTATGTCTC---AATCGCAGCCTCAATATCTTCTCCGTGGATACCGACCGCCA 460592 Query 156412 CCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAAGGTATG 156471 | | ||| ||| ||||| || | ||| | | | || || |||| |||||||||| Sbjct 460593 CACGCATGATCATCTGCTGCGGTCTCTCAGCGACCTTGCCGTCGATTCTGAGAAGGTATG 460652 Query 156472 CGCGTTCCAGAGTTTTAAACCCGAAATA 156499 || |||||||| || || ||||| || Sbjct 460653 ATCGCTCCAGAGTCTTGAAGCCGAAGTA 460680 >seq159 Length=43499 Score = 102 bits (112), Expect = 2e-16 Identities = 114/150 (76%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898 || || || |||||||| |||||| || || || |||||||||||||| ||| | || Sbjct 10063 TGAGCAATTGTCATACGCGAGGGAATGGCGTGAGGGTTGATGATGATGTCCGGTGTGAGA 10122 Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATA-ATGTTTCCAATAGTTCCCTTTTG 251957 || || || ||||||||||| || | || | | || || | || | ||| ||||| || Sbjct 10123 CCGTCTGCTGTGAAGGGCATGTCTTCTTGC-CGGTAGGTGATACCGACAGTACCCTTCTG 10181 Query 251958 TCCGTGACGAGAACTGAACTTATCACCAAT 251987 |||||||||||| |||||||||||| || Sbjct 10182 TCCGTGACGAGATGCGAACTTATCACCGAT 10211 Score = 93.3 bits (102), Expect = 1e-13 Identities = 158/227 (70%), Gaps = 4/227 (2%) Strand=Plus/Plus Query 251482 GATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCG 251541 ||||| || || | |||||||||||| |||||||| || |||||||| |||||||| || Sbjct 9706 GATGCCCCATGCGCAATCATACAATCGCGCTCCATCTCTCCGAAACGGAGACCACCGTCT 9765 Query 251542 CGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTA 251601 | || | ||| || |||| ||||| |||||| | | |||||| || ||| Sbjct 9766 CTCGCACGACCTTCCACAGGTTGACGCGTGAGAATTTGGAGCGGACCGCGGGCACGGGCG 9825 Query 251602 TGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGA-- 251659 || ||| || | ||||| || ||||| |||||| | | ||| |||| ||||| Sbjct 9826 TGAATCTTGTCGTCAACCATGTGGCGAAGACGTTGGTAGTAGGTGGGTCCGAGGAAGACT 9885 Query 251660 TGCTCGAAGGCATTTGCTCTCCAGTTAGAGCGTTATACATAACTTCG 251706 ||| || | | || || || || | |||| ||||| |||||| Sbjct 9886 TGCGCGTTG--AGTTTCTTGCCGGTGTGGCCGTTGTACATGACTTCG 9930 >seq50 Length=206302 Score = 100 bits (110), Expect = 8e-16 Identities = 180/257 (70%), Gaps = 6/257 (2%) Strand=Plus/Plus Query 302563 ATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTT 302622 ||||| | || |||| | ||| | | |||||||||||| |||||||| | || Sbjct 20260 ATCATGACTTCCTCCAAAGCCTTCACAAGACGACGCTGAATGTAACCAGTCTCTGCAGTC 20319 Query 302623 TTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCC 302682 || ||||| || ||||| ||||| ||||||| ||||| || |||||||| | ||||| | Sbjct 20320 TTGACAGCAGTGTCAATGAGACCTTCACGACCTCCCATGGCGTGGAAGAAGAACTCTTGC 20379 Query 302683 GGTCGT--AGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGT 302740 ||| || |||| | ||| | ||| |||| ||||| || | | | ||||| | || Sbjct 20380 GGT-GTCAAGCCACGCAA-GTATGAGTTCTCGACGAATCCTCTTGATGCTGGCGAGTAGT 20437 Query 302741 CGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCAT 302800 | ||| | ||||| ||||| | || || ||||| | || | |||||| || | Sbjct 20438 CATCCTTTGGGAAGTGAGGCAGCACTCGGTACTTGAAGCCGAACGGCAGACGCTTGCCTT 20497 Query 302801 CAA-CGTTCTGCTGTCC 302816 ||| || | |||||||| Sbjct 20498 CAAGCGAT-TGCTGTCC 20513 >seq13 Length=395322 Score = 84.2 bits (92), Expect = 6e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 354016 GCGAGAGCACCAAGCGAGTCACGGTCGAGGAAATTAGTAGGTTCGTCAAGGATAAGAACG 354075 ||||| | || || |||||||| || | ||| || ||||| || ||||||| ||| | | Sbjct 94155 GCGAGGCCTCCCAGAGAGTCACGATCCAAGAAGTTGGTAGGCTCATCAAGGACAAGCAGG 94214 Query 354076 TGCGGCTCCATCCACATTGCTGCAGCCAGAACTACCTTAACCTTCTGTCCGCCTGATAG 354134 || || | ||||||| || | |||| || ||||||||||||||||| ||||| || Sbjct 94215 TGAGGGTTGTTCCACATCGCACCTGCCAAGACAACCTTAACCTTCTGTCCTCCTGAAAG 94273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471808340887467